Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04436 and BL00009
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_04436___ytrB.1.5803.seq
# -bsequence dna-align/BL00009___ytrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04436___ytrB-BL00009___ytrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04436___ytrB-BL00009___ytrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04436___ytrB
# 2: BL00009___ytrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 908
# Identity: 644/908 (70.9%)
# Similarity: 644/908 (70.9%)
# Gaps: 58/908 ( 6.4%)
# Score: 2215.0
#
#
#=======================================
BSNT_04436___ 1 ATGATTGAACTGCGGC--AGCTG--TCAAAAGCGATTGACGGCAATCAAG 46
||||||||.|| | |.||| ||||||.||||||||||.||.|||.
BL00009___ytr 1 ATGATTGAGCT----CAAATCTGTTTCAAAAACGATTGACGGAAAACAAA 46
BSNT_04436___ 47 TATTAAAAGATGTTTCATTAACAATCGAAAAAGGAGAAATCTTTGGATTG 96
||.|.|||||..|.||.||.|...|.||..|||||||.||.||.|||.|.
BL00009___ytr 47 TACTTAAAGACATCTCCTTTAAGCTGGAGGAAGGAGAGATTTTCGGACTT 96
BSNT_04436___ 97 CTTGGACGCAACGGATCGGGCAAAACGACGATGCTTCGCTTAATCCAGCA 146
||.|||.|.|||||.||.||.|||||||||.|.||||||.|.||.|||||
BL00009___ytr 97 CTCGGAAGAAACGGCTCAGGAAAAACGACGCTTCTTCGCCTGATTCAGCA 146
BSNT_04436___ 147 AATCATTTTTGCTGAC-----AGCGGAACGATTTTATTTGACGGCGTAGA 191
|||| .|||||.| || |||...||.||.||.|.|.||||..|
BL00009___ytr 147 AATC----CTGCTGCCTGATGAG-GGAGATATCTTTTTCGGCAGCGTCAA 191
BSNT_04436___ 192 AATCAAAAAGCACCCGAAGGTCAAACAAAATATCATCTACATGCCTGTTC 241
..|.||..|.||.|||...|||||.|..||.|||.||||.|||||.||||
BL00009___ytr 192 GGTGAAGGATCATCCGCTCGTCAAGCGCAACATCGTCTATATGCCCGTTC 241
BSNT_04436___ 242 AAAA-TCCTTTTTACGACAAGTATACA--TACAAGCAGCTTGTTGATATC 288
|||| .|||.||| |||.|| ||||| |||||.|||||.||..||||.
BL00009___ytr 242 AAAACACCTATTT-CGAAAA--ATACAATTACAAACAGCTCGTCAATATT 288
BSNT_04436___ 289 CTGAGAAGAATATATCCGAAATTTGATGTCACGTACGCGAATGAACTGAT 338
.||.|.|..||.||||||.|.||||||||.||.||.||.||||||.|.||
BL00009___ytr 289 TTGCGTAACATTTATCCGGACTTTGATGTTACATATGCAAATGAATTAAT 338
BSNT_04436___ 339 GAACAGATACGAAATTCCAGAAACGAAAAAATACCGTGAGCTGTCGACAG 388
||||.|||||||.|||||.|||||.|||||.|||.|.||..||||.||||
BL00009___ytr 339 GAACCGATACGATATTCCCGAAACAAAAAAGTACAGGGAATTGTCTACAG 388
BSNT_04436___ 389 GCTTGAAAAAACAGCTGTCGCTCGTTCTGTCGTTTGCGGCGAGACCGGCG 438
|.||||||||.||..|||||||..|.|||||.||||||....|.||||||
BL00009___ytr 389 GATTGAAAAAGCAAATGTCGCTGATCCTGTCATTTGCGATCCGGCCGGCG 438
BSNT_04436___ 439 CTGATCCTCCTTGATGAGCCGACGGATGGTATTGATGCGGTAACTAGACA 488
.|.|||||.||||||||||||||.||.||.||||||||.||.||.|||||
BL00009___ytr 439 GTCATCCTGCTTGATGAGCCGACAGACGGCATTGATGCCGTCACAAGACA 488
BSNT_04436___ 489 TGATGTGCTGCAGCTGATGGTCGATGAAGTGGCAGAGCGTGATACGAGTA 538
.||.||.||.|||||||||||||||||||||||.||.....|.||||..|
BL00009___ytr 489 AGACGTTCTTCAGCTGATGGTCGATGAAGTGGCTGAAAACAACACGACGA 538
BSNT_04436___ 539 TCCTGATTACGTCTCACCGGCTTGAAGACATAGAGCGGATGTGCAACCGA 588
|.||.||.||.||||||||||||||.|||||.||..|.||||||||||||
BL00009___ytr 539 TTCTCATCACATCTCACCGGCTTGAGGACATTGAAAGAATGTGCAACCGA 588
BSNT_04436___ 589 ATTGGCTTTCTTGAAGATAACAGGCTGACCAACGTCATGGATCTTGATGA 638
||.||.|||||.|||||.||.|...||.|.|||.||||||||||||||||
BL00009___ytr 589 ATCGGTTTTCTCGAAGACAATACATTGTCGAACATCATGGATCTTGATGA 638
BSNT_04436___ 639 ATTAAAAGAAGAATACATCAAAATACAAATGGCCTTCGATACAGATGTCA 688
|.|.||||..||.|..||.|||||.||||||||.||.||...||||||||
BL00009___ytr 639 ACTGAAAGGCGATTTTATTAAAATTCAAATGGCATTTGAAGAAGATGTCA 688
BSNT_04436___ 689 ATTTGGCCATCAGAGAGCAAA---ACATTCCGATGCTCGATCAGGCCGGC 735
||||....||||| |.||| |.||.||..|..|.||.||..|||||
BL00009___ytr 689 ATTTAAAAATCAG---GGAAAGGGAAATCCCTGTTTTGGACCACACCGGC 735
BSNT_04436___ 736 GTGTTTTACACAGTGCTGATTCCGAAAAGCGATGAGGAGAA-------AA 778
||.|||||.||.||..||.|||||||| ||.||.|| ||
BL00009___ytr 736 GTCTTTTATACGGTATTGGTTCCGAAA------GAAGACAATGTGAGCAA 779
BSNT_04436___ 779 AGAGCTTTTTGAGAGAGCTGAAG-------CCAAAAGTATGGAATGAGCT 821
|.|..||.||.| ||| ||.|||||.|||||.|||||
BL00009___ytr 780 ACAATTTCTTAA--------AAGTTTGTCTCCGAAAGTTTGGAACGAGCT 821
BSNT_04436___ 822 TCCTGTCAACCTGGAAGAAGTGTTCATTGCGAAGTTTGGAGGGAAGCGGA 871
|||.||||..||.||.|||||.|||||.|||||||.||||||.|||||.|
BL00009___ytr 822 TCCGGTCAGTCTTGAGGAAGTATTCATCGCGAAGTATGGAGGTAAGCGAA 871
BSNT_04436___ 872 GATGGTAG 879
||||||||
BL00009___ytr 872 GATGGTAG 879
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