Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04338 and BL00052
See
Amino acid alignment /
Visit
BSNT_04338 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence dna-align/BSNT_04338___ytxG.1.5803.seq
# -bsequence dna-align/BL00052___ytxG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04338___ytxG-BL00052___ytxG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04338___ytxG-BL00052___ytxG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04338___ytxG
# 2: BL00052___ytxG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 312/446 (70.0%)
# Similarity: 312/446 (70.0%)
# Gaps: 46/446 (10.3%)
# Score: 1075.5
#
#
#=======================================
BSNT_04338___ 1 ATGATTATTATTCTTTATTTGAGCGTTGCACTCATCGCAGTT-GCATTTC 49
||||||||||||||.|||||.||||.||||||||||||.||| || ||||
BL00052___ytx 1 ATGATTATTATTCTGTATTTAAGCGCTGCACTCATCGCTGTTAGC-TTTC 49
BSNT_04338___ 50 TCGTATTAGTGATCTACTTGTCTAAAACACTGAAGTCATTGCAGCTGACA 99
|..|.||.||.|||||.||.||.||||||.|.||.||..|.||..|.|||
BL00052___ytx 50 TTATTTTGGTTATCTATTTATCAAAAACATTAAAATCGCTTCAAGTCACA 99
BSNT_04338___ 100 CTAAAAAACGTCGCATCCACTCTTGAAGGGCTGGAGGGACAAATGAAGGG 149
||.||..|.||.|||||.||.||.|||||..||||.|||||||||||.||
BL00052___ytx 100 CTTAATCATGTTGCATCAACGCTGGAAGGTGTGGAAGGACAAATGAAAGG 149
BSNT_04338___ 150 CATCACAACTGAAACAGCCGAGCTTTTACATAAGACCAACCGCCTGGCTG 199
||||||..||||||||.|.|||||..|..|||||||.||.||.||.||||
BL00052___ytx 150 CATCACCGCTGAAACAACGGAGCTCCTGAATAAGACGAATCGGCTCGCTG 199
BSNT_04338___ 200 AAGATATTCAGGAAAAATCAGAAAAGCTGAATACGGTCGTTCATGCTGTT 249
|.|||||||||||||||||....|||||||||||||||||..||||.|||
BL00052___ytx 200 ATGATATTCAGGAAAAATCTTTGAAGCTGAATACGGTCGTGGATGCCGTT 249
BSNT_04338___ 250 CAAGGAGTGGGAGCTTCTGTACA-GCAGTTCAATACATCCATGAAACAAG 298
||.|.|||.||..|.||.|| || ||||||.||.|..||||| .
BL00052___ytx 250 CAGGAAGTCGGCACATCGGT-CAGGCAGTTTAACAACTCCAT-------T 291
BSNT_04338___ 299 CGGCAGG-------GTCTGT---ATCGGCATCAGTTAGAG-AAAATCAAG 337
|.||||| |||.|| |||.||..| |||| ||||.|..|
BL00052___ytx 292 CAGCAGGTTTCACAGTCCGTCACATCAGCCGC----AGAGCAAAACCGTG 337
BSNT_04338___ 338 ATAAGATCAATCAAGTTGTCACATGGAGTCAA-GCAGCAATGGAAATTTG 386
|.||.||...|||||||||||..||||| ||| |||||..||||||||||
BL00052___ytx 338 AAAAAATTTCTCAAGTTGTCAGCTGGAG-CAATGCAGCTTTGGAAATTTG 386
BSNT_04338___ 387 GGAGAAATGGAAGCAAAAGAAAA---------AATCAGCCCTGTAA 423
|.|.|.||||||.||||||||.| |||.|
BL00052___ytx 387 GAATAGATGGAAACAAAAGAAGATGAGGGAGGAATAA--------- 423
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.