Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04445 and BL00059

See Amino acid alignment / Visit BSNT_04445 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence dna-align/BSNT_04445___ytoA.1.5803.seq
#    -bsequence dna-align/BL00059___ytoA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04445___ytoA-BL00059___ytoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04445___ytoA-BL00059___ytoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04445___ytoA
# 2: BL00059___ytoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 535
# Identity:     375/535 (70.1%)
# Similarity:   375/535 (70.1%)
# Gaps:          35/535 ( 6.5%)
# Score: 1256.0
# 
#
#=======================================

BSNT_04445___      1 ATGATCTACCCTTATAA------GGAACACAAGCCAGATATCCACCCAAC     44
                     |||||||||||||||||      ||||      ||.|.|||.||...|||
BL00059___yto      1 ATGATCTACCCTTATAAAAAAACGGAA------CCCGTTATTCATGAAAC     44

BSNT_04445___     45 AGCCTTTATAGCTGATAATGCAACAATTACCGGTGATGTCGTGATCGGAG     94
                     .||.|||||.||.||.||.||....||.|||||.|||||....|||||||
BL00059___yto     45 GGCGTTTATCGCCGACAACGCGGTCATCACCGGAGATGTAACAATCGGAG     94

BSNT_04445___     95 AACAGTCCAGCATTTGGTTTTCTGTTGTCATAAGGGGAGATGTTGCGCCG    144
                     |.|..||.|||||.|||||.|||..|||.||..|.||.|||||.||.|||
BL00059___yto     95 AGCGATCAAGCATCTGGTTCTCTTCTGTTATCCGCGGCGATGTCGCCCCG    144

BSNT_04445___    145 ACCAGAATCGGAAACAGAGTCAATATCCAAGA--TTTAAGCTGCCTCCAT    192
                     ..||||||.|||||..|.||.||.||.|||||  |||  .|||.||.||.
BL00059___yto    145 GTCAGAATTGGAAAAGGTGTGAACATTCAAGACCTTT--CCTGTCTGCAC    192

BSNT_04445___    193 CAAAGCCC-GAACAAGACGCTGCTC---ATTGAAGATGACGCCACGATAG    238
                     |||||||| ||||   .|.|| |||   ||||||||.|..|..|||.|||
BL00059___yto    193 CAAAGCCCTGAAC---GCCCT-CTCGTGATTGAAGACGGTGTGACGGTAG    238

BSNT_04445___    239 GCCATCAGGTTACACTTCATAGCGCTGTTATCCGCAAGAACGCCTTAATC    288
                     ||||||||||||||.|.||.|||.|.||.||.||.|||.|.|||.|.|||
BL00059___yto    239 GCCATCAGGTTACATTGCACAGCTCCGTGATTCGAAAGCATGCCCTTATC    288

BSNT_04445___    289 GGGATGGGCTCAATCATTTTAGACGGAGCCGAAATTGGCGAAGGCGCTTT    338
                     ||.|||||.||.||.|||.|.||||.|||.||.||.||.|||||||||||
BL00059___yto    289 GGAATGGGGTCGATTATTCTTGACGAAGCGGAGATCGGGGAAGGCGCTTT    338

BSNT_04445___    339 TATTGGTGCCGGCAGTCTTGTCCCGCCCGGAAAAATCATTCCGCCTGACC    388
                     |||.||.||.|||||.|||||||||||.||.||||..||.|||.|.|..|
BL00059___yto    339 TATCGGGGCGGGCAGCCTTGTCCCGCCTGGCAAAAAGATCCCGTCCGGGC    388

BSNT_04445___    389 ATCTCGCCTTTGGCCGCCCTGCAAAAGTCATCCGCCCTTTGACGGAAGAA    438
                     |.|||||.||.|||.|.||.||.|||||||||||.||.||.||.||..||
BL00059___yto    389 ACCTCGCATTCGGCAGGCCCGCCAAAGTCATCCGTCCGTTAACCGACAAA    438

BSNT_04445___    439 GACCGAAAAGATATGCAAAGAATACGGTCAGAATATGTAGAAAAGGGCCA    488
                     ||...|.|.||.|||.||||||||||...|||||||.|.|||||.||.||
BL00059___yto    439 GATAAACAGGAAATGGAAAGAATACGCAAAGAATATATTGAAAAAGGACA    488

BSNT_04445___    489 ATATTATAAATTTCTT-CAACAAACATAA------    516
                     |||.||.||| |.||| |||.|||   ||      
BL00059___yto    489 ATACTACAAA-TCCTTGCAAAAAA---AAGATTAG    519


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