Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01446 and BL00075
See
Amino acid alignment /
Visit
BSNT_01446 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_01446___perR.1.5803.seq
# -bsequence dna-align/BL00075___perR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01446___perR-BL00075___perR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01446___perR-BL00075___perR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01446___perR
# 2: BL00075___perR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 348/440 (79.1%)
# Similarity: 348/440 (79.1%)
# Gaps: 4/440 ( 0.9%)
# Score: 1367.0
#
#
#=======================================
BSNT_01446___ 1 ATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGG 50
|||||||.||||.|.||.||||||||.||.|||.||||||||||||||||
BL00075___per 1 ATGGCTGAACATAACCTGAAAGAAGCGTTGGAAGCGTTGAAGGAAACCGG 50
BSNT_01446___ 51 AGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACT 100
.||.||.||||||||||||||||||||.||||||||||.||||||.||.|
BL00075___per 51 GGTGCGAATTACTCCTCAACGTCATGCCATTCTGGAATTTCTCGTGAATT 100
BSNT_01446___ 101 CTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAA 150
|||||.||||||||||.||.||.|||||||||||||||||.|||||||||
BL00075___per 101 CTATGTCTCATCCAACTGCAGATGATATATATAAAGCTCTCGAAGGGAAA 150
BSNT_01446___ 151 TTTCCTAACATGAGCGTAGCGACAGTATATAACAATTTGCGTGTGTTCCG 200
|||||.||||||||||||||.||.||.||.|||||||||||.||.||...
BL00075___per 151 TTTCCAAACATGAGCGTAGCAACGGTCTACAACAATTTGCGGGTTTTTAA 200
BSNT_01446___ 201 GGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTCCAGCAGAT 250
|||||||||..|.||.||.||..|.||.|||||.|||.|.||||||.|.|
BL00075___per 201 GGAATCAGGGCTCGTTAAGGAATTAACGTACGGAGATTCCTCCAGCCGGT 250
BSNT_01446___ 251 TCGATTTTGTGACATCTGATCACTATCACGCGATTTGCGAAAACTGCGGT 300
|.||.||.|||||.||.||.||.||||||||.|||||||||..||||||.
BL00075___per 251 TTGACTTCGTGACTTCCGAGCATTATCACGCAATTTGCGAACGCTGCGGG 300
BSNT_01446___ 301 AAAATTGTGGACTTCCACTACCCGGGCCTTGATGAAGTGGAACAGCTCGC 350
|||||.||.|||||.||.||.||.|||||.||.||||||||.|||||.||
BL00075___per 301 AAAATCGTCGACTTTCATTATCCCGGCCTCGACGAAGTGGAGCAGCTTGC 350
BSNT_01446___ 351 TGCCCACGTCACAGGCTTCAAGGTAAGCCACCACCGTTTAGAAATTTACG 400
|.|.||.||.|||||.||.||.||.||.|||||..|..|.||.||.||||
BL00075___per 351 TTCACATGTGACAGGATTTAAAGTCAGTCACCATAGACTGGAGATATACG 400
BSNT_01446___ 401 GCGTCTGCCAAGAGTGTTCG--AAAAAAGAAAATCATTAA 438
|..|.||.||.||.|| || ||||||||||..||||||
BL00075___per 401 GTTTATGTCAGGAATG--CGACAAAAAAGAAAGCCATTAA 438
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.