Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06222 and BL00092

See Amino acid alignment / Visit BSNT_06222 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:11
# Commandline: needle
#    -asequence dna-align/BSNT_06222___rplI.1.5803.seq
#    -bsequence dna-align/BL00092___rplI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06222___rplI-BL00092___rplI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06222___rplI-BL00092___rplI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06222___rplI
# 2: BL00092___rplI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 476
# Identity:     334/476 (70.2%)
# Similarity:   334/476 (70.2%)
# Gaps:          52/476 (10.9%)
# Score: 1160.5
# 
#
#=======================================

BSNT_06222___      1 ATGAAGGTTATTTTCTTACAAGATGTAAAAGGAAAAGGAAAAAAAGGCGA     50
                     ||||||||.|||||||||||.|||||.|||||.|||||.|||||||||||
BL00092___rpl      1 ATGAAGGTAATTTTCTTACAGGATGTTAAAGGCAAAGGGAAAAAAGGCGA     50

BSNT_06222___     51 AGTCAAAAACGTAGCAGACGGTTATGCGCATAACTTTCTAATTAAAAAAG    100
                     |||.|||||.|||||.||.||.||.|||||.||||||.|.||.|||||||
BL00092___rpl     51 AGTGAAAAATGTAGCGGATGGATACGCGCACAACTTTTTGATCAAAAAAG    100

BSNT_06222___    101 GCCTCGCGGTTGAAGCGAACGCTTCAAACATCAGCGCGCTAAACGGACAA    150
                     |.||.||.||||||||||...|..|.||.|||||||||||..|.||.||.
BL00092___rpl    101 GGCTGGCTGTTGAAGCGACATCCGCCAATATCAGCGCGCTTGAAGGTCAG    150

BSNT_06222___    151 AAGCAGAAAGAGAAAAAAGAAGCCATTGCTGAGCTTGAGCAGGCT-----    195
                     |||.|.||||||||.||||||||   .|||||     ||.|  ||     
BL00092___rpl    151 AAGAAAAAAGAGAAGAAAGAAGC---GGCTGA-----AGAA--CTGAAAT    190

BSNT_06222___    196 ------AAGAGCTTGAAAGAGACA---TTAGAAAAACTGACTGTTGAGCT    236
                           |||||| ||||| |.|||   |.||.|.|  |.||.||.|||||
BL00092___rpl    191 CTGCGAAAGAGC-TGAAA-AAACAGCTTGAGGAGA--TTACGGTGGAGCT    236

BSNT_06222___    237 TAGCGCAAAATCAGGTGAGGGCGGCCGTTTATTTGGTTCAGTGACAAGCA    286
                     |...||.||.||.||.||.||||||||||||||.||.||.||||||||||
BL00092___rpl    237 TTCAGCCAAGTCCGGAGAAGGCGGCCGTTTATTCGGCTCCGTGACAAGCA    286

BSNT_06222___    287 AGCAAATTACTGAACAGCTCCAAAAAGACCATAACATTAAAGTAGATAAG    336
                     |.||||||.|.||...|||.|||||||.||||.|..|.|||||.||.||.
BL00092___rpl    287 AACAAATTGCAGATGCGCTGCAAAAAGGCCATCAGTTAAAAGTCGACAAA    336

BSNT_06222___    337 CG-------GAAGCTTGAACTGCCGGACGGCATTCGTGCATTAGGATATA    379
                     ||       |||  ||.|||     ||.|..|||||..||||.|||||||
BL00092___rpl    337 CGCAAAATCGAA--TTAAAC-----GATGCGATTCGCTCATTGGGATATA    379

BSNT_06222___    380 CGAACGTGCCTGTGAAGCTGCATCCTGAAGTGCAGG-----CTGTGTTAA    424
                     ||||.||.||.||||||||.|||||.|||||.||.|     |||     |
BL00092___rpl    380 CGAATGTTCCCGTGAAGCTCCATCCGGAAGTACAAGCAACACTG-----A    424

BSNT_06222___    425 AGGTACATGTAAAAGAAGAAGCTTAA    450
                     |.||.||.||.|||||..||.|.|||
BL00092___rpl    425 AAGTTCACGTGAAAGAGCAATCATAA    450


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