Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06270 and BL00099
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:13
# Commandline: needle
# -asequence dna-align/BSNT_06270___ssb.1.5803.seq
# -bsequence dna-align/BL00099___ssb.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06270___ssb-BL00099___ssb.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06270___ssb-BL00099___ssb.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06270___ssb
# 2: BL00099___ssb
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity: 429/525 (81.7%)
# Similarity: 429/525 (81.7%)
# Gaps: 18/525 ( 3.4%)
# Score: 1757.5
#
#
#=======================================
BSNT_06270___ 1 ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCT 50
|||||||||||||||||.||||||||.|||||||||||.|||||||||||
BL00099___ssb 1 ATGCTTAACCGAGTTGTTTTAGTCGGCAGACTGACAAAGGACCCAGAGCT 50
BSNT_06270___ 51 TCGTTATACGCCAAACGGTGCGGCTGTTGCTACGTTTACTCTTGCTGTGA 100
|||||||||.||.|.||||||.||||||||.||.|||||.||||||||.|
BL00099___ssb 51 TCGTTATACTCCTAGCGGTGCAGCTGTTGCCACCTTTACGCTTGCTGTCA 100
BSNT_06270___ 101 ATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAAT 150
|||||||.||||||||.|||...||.||||||||.||.||||||||.||.
BL00099___ssb 101 ATCGTACGTTTACGAATCAGCAGGGTGAACGTGAAGCTGATTTCATCAAC 150
BSNT_06270___ 151 TGTGTCACTTGGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAA 200
|||||....|||||||||||||||||||||||||||||.|||.|.|||||
BL00099___ssb 151 TGTGTTGTCTGGAGAAGACAAGCCGAAAACGTTGCAAATTTCCTTAAAAA 200
BSNT_06270___ 201 AGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGAAACTATGAAA 250
||||||.|||||.||.||||||||.|||||.|||||..|.|.||||||||
BL00099___ssb 201 AGGAAGTCTTGCGGGTGTAGATGGACGTTTGCAAACGCGCAGCTATGAAA 250
BSNT_06270___ 251 ACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTT 300
|.|||||.|||||||||||.|.|||.||.||.||.|||||||||||||||
BL00099___ssb 251 ATCAGCAGGGACAGCGTGTATACGTCACGGAAGTTCAAGCTGAAAGTGTT 300
BSNT_06270___ 301 CAATTTCTTGAGCCGAAAAACGGCGGCGGTTCTGGTTCAGGTGGATACAA 350
||||||||.|||||.||| |||||||||||||||||.||.||.||||.
BL00099___ssb 301 CAATTTCTGGAGCCTAAA---GGCGGCGGTTCTGGTTCCGGCGGTTACAG 347
BSNT_06270___ 351 CGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA 400
||.||| .||| ||||||||..||||||||||.||.||||||| |
BL00099___ssb 348 CGGAGG--CCAG----GGAGGCCAACACTTTGGCGGCGGACAAAATG--A 389
BSNT_06270___ 401 A-----TCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGA 445
| ||||||.||.||.|.|||||||||.||||..||||||||.||.|
BL00099___ssb 390 ACCGGCTCCATTCGGCGGCAGTCAAAACAATCAGAATCGCAATCAAGGCA 439
BSNT_06270___ 446 ACAGCTTTAATGATGACCCATTTGCCAACGACGGCAAACCGATTGACATC 495
|||||||.|||||.||.|||||.||.||.||.||.||.||||||||||||
BL00099___ssb 440 ACAGCTTCAATGACGATCCATTCGCAAATGATGGAAAGCCGATTGACATC 489
BSNT_06270___ 496 TCGGATGATGATCTT-CCATTCTAA 519
||.|||||.|| ||| |||||.|||
BL00099___ssb 490 TCTGATGACGA-CTTGCCATTTTAA 513
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