Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00927 and BL00105
See
Amino acid alignment /
Visit
BSNT_00927 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence dna-align/BSNT_00927___ydfG.1.5803.seq
# -bsequence dna-align/BL00105___ydfG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00927___ydfG-BL00105___ydfG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00927___ydfG-BL00105___ydfG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00927___ydfG
# 2: BL00105___ydfG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 507
# Identity: 282/507 (55.6%)
# Similarity: 282/507 (55.6%)
# Gaps: 126/507 (24.9%)
# Score: 612.0
#
#
#=======================================
BSNT_00927___ 1 AT-GAGTCAAAGAGTGTCCTACTATGAGATTGCACCTGAAGGTATGAAAA 49
|| || ||.|||..|.||| ||| ||| .|.|.|||
BL00105___ydf 1 ATGGA---AACGAGATTTCTA--ATG-----------GAA--AAAGTAAA 32
BSNT_00927___ 50 TCATGATGGATATGGAGAAATACACGA-----AACAA---------TCCT 85
||.|||.|||||..|||.|||.|..|| ||.|| ||.|
BL00105___ydf 33 TCCTGAGGGATACAGAGGAATGCTGGAGCTTGAAAAAGCGCAGGCTTCTT 82
BSNT_00927___ 86 C---AATTAACC------GAACGACGAGAGAACTAATCAAAATCAGAGTC 126
| .|||.||| .||.| |||||.|||||||||.|.|..
BL00105___ydf 83 CTGGCATTGACCCCATTTTAAAG------GAACTGATCAAAATCCGGGCT 126
BSNT_00927___ 127 TCTCAAATGAACGGCTGTGCCTACTGCATAGATATGCATACGTCCGATGC 176
||.||..|||||||.|||||.|.||||.||.|||||||||||...|||||
BL00105___ydf 127 TCACAGCTGAACGGATGTGCTTTCTGCTTAAATATGCATACGAAGGATGC 176
BSNT_00927___ 177 CCG-CAAAATGGGGGAAACTGAACAGCGAATTTACTGTTTAC-----ATG 220
..| ||.|| .||||||||.||||||||.||.|| |.| |||
BL00105___ydf 177 AAGACAGAA-CGGGGAAACGGAACAGCGGATATA-----TGCGCTCAATG 220
BSNT_00927___ 221 CTTGGAATGAATGTG-ATTTTTACTCACCTGAAGAGAAAGC-GGCTCT-- 266
|.|||...||| |.| .||||| |||| |.|.|.|.||| ||||.|
BL00105___ydf 221 CGTGGCGGGAA-GCGCCTTTTT--TCAC--GGAAAAAGAGCGGGCTGTAT 265
BSNT_00927___ 267 ---CGAACTATCTGAACACATCACGCTCAT--TCCATCTAAAAGGGTT-C 310
|| ||..|||||..|.|.||||..|| .|.|.| |.||||| |
BL00105___ydf 266 TGGCG--CTGACTGAAGCCGTTACGCGAATCGGCGAGC---ACGGGTTGC 310
BSNT_00927___ 311 CTGATGAGCTATATCATCG-GGTGCGGGA-ACATT------ATGATGAAA 352
|.|||||..|||| ||.|| .|| |.||| .|||| |.|.|||||
BL00105___ydf 311 CGGATGAAATATA-CAACGAAGT-CAGGACCCATTTTACAGAAGCTGAAA 358
BSNT_00927___ 353 ------AACAATATGTTGACCTTGTTCTCAT--CATTAATCA-AATAAAC 393
||| ||| |||| ||....||| ||||||.
BL00105___ydf 359 CAGCCGAAC-------TGA--------TCATGGCAGCTGTCACAATAAAT 393
BSNT_00927___ 394 AGTTGGAACCGCATCTCTATTGCAATGGGGAA-----TCG-AGCTGCTTC 437
...||||||.|.||..|.||.||.|...|||| .|| |||.|.||.
BL00105___ydf 394 GCCTGGAACAGGATTGCCATCGCCACCCGGAAAATGCCCGCAGCAGATTG 443
BSNT_00927___ 438 AAAATAA 444
|
BL00105___ydf 444 A------ 444
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.