Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00981 and BL00124
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence dna-align/BSNT_00981___ydgK.1.5803.seq
# -bsequence dna-align/BL00124___ydgK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00981___ydgK-BL00124___ydgK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00981___ydgK-BL00124___ydgK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00981___ydgK
# 2: BL00124___ydgK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1229
# Identity: 944/1229 (76.8%)
# Similarity: 944/1229 (76.8%)
# Gaps: 43/1229 ( 3.5%)
# Score: 3572.5
#
#
#=======================================
BSNT_00981___ 1 ATGCTGCACAATCCAACTGGAAAAGAACGCTTGGCACTAGCGTTTCTGCT 50
|||||.||.||||||..|||||||||..|.||||||.|.||.||||||||
BL00124___ydg 1 ATGCTTCATAATCCAGTTGGAAAAGAGAGGTTGGCATTGGCTTTTCTGCT 50
BSNT_00981___ 51 CGGTATGCTTGCTATATTGGGCCCGCTTAATATAGATATGTATTTGCCAA 100
|||.||||||||.|||.|.||.||.||||||||.||||||||||||||.|
BL00124___ydg 51 CGGAATGCTTGCCATACTTGGACCTCTTAATATCGATATGTATTTGCCGA 100
BSNT_00981___ 101 GTTTTCCTGAAATCGCGGAAGATTTATCAGCAAGTGCTTCACTTGTTCAG 150
|.||.||||||||.|||||.||..|...|||..||||.||.|||||.|||
BL00124___ydg 101 GCTTCCCTGAAATAGCGGATGACCTGGGAGCCGGTGCGTCGCTTGTGCAG 150
BSNT_00981___ 151 TTAAGTTTAACAGCCTGTCTGGTCGGACTTACGATCGGCCAGC---TGAT 197
.|.||.|||||.||.||..||.||||.|||||.|||||||||| ||||
BL00124___ydg 151 CTCAGCTTAACGGCTTGCTTGATCGGCCTTACCATCGGCCAGCTCGTGAT 200
BSNT_00981___ 198 TGTCGGGCCGGTCAGCGATGCGCAGGGAAGACGAAAACCGCTATTAATCT 247
| |||||.||.|||||||||.|||||||.||||||||..|||||||.|
BL00124___ydg 201 T---GGGCCTGTGAGCGATGCGAAGGGAAGGCGAAAACCTTTATTAATTT 247
BSNT_00981___ 248 GTATTTTTTTATTTGCGTTATCTTCTCTGTTTTGTGCACTGTCGCCCAAT 297
..||||...|.||||||.|.|||||.||||||||.||.||||||||.|||
BL00124___ydg 248 CGATTTCGCTGTTTGCGCTGTCTTCACTGTTTTGCGCGCTGTCGCCTAAT 297
BSNT_00981___ 298 ATAACAACTTTAGTGGCTGCGCGTTTTTTACAAGGCTTCACTGCTTCTGC 347
||..|.||.||||||..|||.|||||||||||.||.||.||.|||||.||
BL00124___ydg 298 ATCGCGACATTAGTGCTTGCCCGTTTTTTACAGGGATTTACCGCTTCGGC 347
BSNT_00981___ 348 AGGGCTTGTGCTGTCTCGCGCAATCGTCCGCGATGTGTTTACCGGAAGAG 397
.||..||||||||||.|||||.||.||.||.||.||||||||.||.||||
BL00124___ydg 348 TGGAATTGTGCTGTCGCGCGCCATTGTACGGGACGTGTTTACAGGGAGAG 397
BSNT_00981___ 398 AGCTTTCTAAATTTTTCTCGCTGTTAATGGTCATTACCGCGGTGGCGCCA 447
||||||||||||||||||||||..|||||||.||.||||||||.|||||.
BL00124___ydg 398 AGCTTTCTAAATTTTTCTCGCTTCTAATGGTTATCACCGCGGTTGCGCCG 447
BSNT_00981___ 448 ATGGTTGCGCCTATGACAGGCGGTGCCATTTTGCTTTTGCCGTTCGCAAC 497
|||||.|||||.|||||.||.||.|||||..||||||||||||||||.||
BL00124___ydg 448 ATGGTCGCGCCGATGACGGGGGGAGCCATCCTGCTTTTGCCGTTCGCTAC 497
BSNT_00981___ 498 GTGGCATACAATTTTT--CACGTCCT--CATGATCATCGGATTTTTACTA 543
.||||||||.|||||| .||| || ||| |.||||||||.||||||
BL00124___ydg 498 TTGGCATACGATTTTTTATACG--CTGGCAT--TGATCGGATTGTTACTA 543
BSNT_00981___ 544 GTTCTTCTGATTGCATTGAGGTTAAAAGAAACGCTTCCGCCGGAAAAACG 593
||.||..|.||..|..|||..||.|..|||||..|.|||||.||||||||
BL00124___ydg 544 GTACTCGTTATCTCGATGAAATTGACTGAAACATTGCCGCCCGAAAAACG 593
BSNT_00981___ 594 GATTCCAAGCTCAATCGGAACATCCGTCAAAACGATGGGCAGCCTGCTGA 643
||||||||||||||||||..|.||..|||||||||||||.|||.||.|||
BL00124___ydg 594 GATTCCAAGCTCAATCGGTTCGTCTCTCAAAACGATGGGGAGCTTGTTGA 643
BSNT_00981___ 644 AGGATCGATCCTTTATGGGGTACGCGTTAACTGTCGGATTTATTCACGGG 693
|||||||.||.|||||.||.||.|||.|.||||||||.||.||||||||.
BL00124___ydg 644 AGGATCGGTCTTTTATCGGCTATGCGCTGACTGTCGGTTTCATTCACGGA 693
BSNT_00981___ 694 GGAAGCTTTGCATATGTGTCTGGTACGCCTTTTGTATACCAGGATATCTA 743
||.||||||||.||.||.||.||.||||||||||||||.|||||||||||
BL00124___ydg 694 GGCAGCTTTGCCTACGTATCCGGAACGCCTTTTGTATATCAGGATATCTA 743
BSNT_00981___ 744 CGGGGTGTCGCCGCAGGTATTTAGTATTCTTTTTGGCATTAACGGGCTGG 793
.|||||.||.||.|||||.||.||..|.||.||.|||||||||||.||.|
BL00124___ydg 744 TGGGGTTTCTCCTCAGGTGTTCAGCGTGCTGTTCGGCATTAACGGCCTCG 793
BSNT_00981___ 794 CGATTATATCGGGCAGCTTTATCATCGGACGCTTTGGCGGAATCATTCAT 843
|.|||||.|||||.||||||||||||||.||.||.||.||||||||||||
BL00124___ydg 794 CCATTATTTCGGGAAGCTTTATCATCGGGCGATTCGGGGGAATCATTCAT 843
BSNT_00981___ 844 GA-AAAAAGC-CTGCTTCGTATAGCGGTCATTACGGCTATGATTGCGACG 891
|| |..|||| || |.||.||.|||||||||||.|||.|.||.|||||.
BL00124___ydg 844 GAGAGGAAGCTCT--TGCGGATCGCGGTCATTACCGCTGTCATCGCGACA 891
BSNT_00981___ 892 GCTGTGCTATTAACCATGACCATGATTCACGGTCCTCTTGCTAC-ATTAG 940
.|.||.||..|.||.|||||.||..|..|.||.||.|||||..| ||| |
BL00124___ydg 892 TCCGTTCTCCTGACGATGACGATTTTGAAAGGACCGCTTGCAGCGATT-G 940
BSNT_00981___ 941 TCATATCCATTTTCATTTACATGATTACGATCGGCATG--GTTCTGACCA 988
||||.||.||.||.||.||||||||.||.|||||.||| || ||||.|
BL00124___ydg 941 TCATTTCAATCTTTATCTACATGATAACCATCGGAATGACGT--TGACAA 988
BSNT_00981___ 989 GCACGTTTACCCTGGCCATGGAAAAGCAGGGGCACCGCGCCGGAAGTGCA 1038
||||.|||||.|||||.||||||||.|||||||||||.||.||.||||||
BL00124___ydg 989 GCACATTTACGCTGGCGATGGAAAACCAGGGGCACCGTGCGGGCAGTGCA 1038
BSNT_00981___ 1039 AGTGCGCTGCTTGGGATGCTCCCGCTGCTCCTTGGTTCAATCGTGTCACC 1088
||.||..||||.||.|||||.||||||||.||.|||||.|||||.||.||
BL00124___ydg 1039 AGCGCAATGCTGGGCATGCTTCCGCTGCTGCTCGGTTCGATCGTTTCGCC 1088
BSNT_00981___ 1089 GCTTGTAGGCATTAATGAGACAACAGCCGTTCCGATGGGAGCCATCATGT 1138
.||.||.||.||.|||||.|||||.||||||||.|||||.||.|||||||
BL00124___ydg 1089 TCTCGTTGGAATGAATGAAACAACGGCCGTTCCAATGGGTGCGATCATGT 1138
BSNT_00981___ 1139 TTGTAACAGCTGTCATCGGCTCACTGGCGTTTTTTGGATTAAC----GAA 1184
|..|.||.|||||.||||||||..|.||.|||||||..||||| |||
BL00124___ydg 1139 TCATCACTGCTGTGATCGGCTCTTTCGCTTTTTTTGCTTTAACGCGGGAA 1188
BSNT_00981___ 1185 AGAACGAGTAGGGCAG----AATTCATAA 1209
|||.|| |||.|| ||
BL00124___ydg 1189 --AACCAG--GGGGAGCGGTAA------- 1206
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