Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06253 and BL00130
See
Amino acid alignment /
Visit
BSNT_06253 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:13
# Commandline: needle
# -asequence dna-align/BSNT_06253.1.5803.seq
# -bsequence dna-align/BL00130___yyaO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06253-BL00130___yyaO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06253-BL00130___yyaO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06253
# 2: BL00130___yyaO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 140/187 (74.9%)
# Similarity: 140/187 (74.9%)
# Gaps: 26/187 (13.9%)
# Score: 562.0
#
#
#=======================================
BSNT_06253 1 ATGCCCACTAACAATAAGCCCAATAGATTAATCGCTGAGAAGTCTCCTTA 50
|||||.|..||.|.|||.||||||||||||||||||||||||||.||.||
BL00130___yya 1 ATGCCAAACAAAAGTAAACCCAATAGATTAATCGCTGAGAAGTCACCGTA 50
BSNT_06253 51 TTTACTTCAACATGCTCATAACCCTGTGAATTGGTTCCCTTGGGGAGATG 100
.|||||.|||||||||||||||||||||.|.|||||||||||||||||.|
BL00130___yya 51 CTTACTCCAACATGCTCATAACCCTGTGGACTGGTTCCCTTGGGGAGAAG 100
BSNT_06253 101 AAGCATTTGAAAAAGCGAAACGCGAAAACAAGCCTGTTCTGGTCAGCATC 150
||||||||||.|||||||||.||||.|||||||||||.||.|| |||
BL00130___yya 101 AAGCATTTGACAAAGCGAAAAGCGAGAACAAGCCTGTACTCGT----ATC 146
BSNT_06253 151 GGTTATTCGACTTGTCATTGGT-GCCATGTCTCTTAA 186
||||.| || ||.|.| |
BL00130___yya 147 ---TATTGG----GT-ATAGCTAG------------- 162
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.