Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06104 and BL00183

See Amino acid alignment / Visit BSNT_06104 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence dna-align/BSNT_06104___iolS.1.5803.seq
#    -bsequence dna-align/BL00183___iolS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06104___iolS-BL00183___iolS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06104___iolS-BL00183___iolS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06104___iolS
# 2: BL00183___iolS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 939
# Identity:     730/939 (77.7%)
# Similarity:   730/939 (77.7%)
# Gaps:           9/939 ( 1.0%)
# Score: 2807.5
# 
#
#=======================================

BSNT_06104___      1 ATGAAAAAAGCGAAGCTCGGAAAATCAGACTTGCAGGTATTCCCTATCGG     50
                     ||||||||||..||..|.||.||||||||||||||.|||||.||.||.||
BL00183___iol      1 ATGAAAAAAGTTAAAGTTGGCAAATCAGACTTGCACGTATTTCCGATTGG     50

BSNT_06104___     51 ATTAGGAACAAATGCTGTCGGAGGACATAACCTCTACCCGAACCTGAATG    100
                     .||.|||||.|||||||||||||||||||||||.||.|||||.||.||||
BL00183___iol     51 TTTGGGAACCAATGCTGTCGGAGGACATAACCTTTATCCGAATCTCAATG    100

BSNT_06104___    101 AAGAAACCGGAAAAGAATTGGTGCGCGAGGCGATTCATAATGGCGTGACC    150
                     |||||||.|||||||||||||||||.||.||.||....||.|||||.||.
BL00183___iol    101 AAGAAACGGGAAAAGAATTGGTGCGGGAAGCAATAAGAAACGGCGTCACT    150

BSNT_06104___    151 ATGTTAGACACCGCTTATATTTACGGGATCGGCCGTTCCGAAGAATTAAT    200
                     .|.|||||.|||||.||.||.|||||.||||||||||||||.||||||||
BL00183___iol    151 TTTTTAGATACCGCCTACATATACGGCATCGGCCGTTCCGAGGAATTAAT    200

BSNT_06104___    201 TGGTGAAGTGCTGCGTGAATTCAACCGTGAAGATGTTGTCATCGCCACAA    250
                     .||.|||||.||....|||||||||||.||||||||.||.||.||.||||
BL00183___iol    201 CGGCGAAGTCCTTAAAGAATTCAACCGCGAAGATGTCGTGATTGCAACAA    250

BSNT_06104___    251 AAGCCGCTCACAGAAAACAAGGCAATGACTTTGTCTTTGATAATTCACCA    300
                     |||||||.||.|..|||.||||..|.||.|||||||||||.||.||.||.
BL00183___iol    251 AAGCCGCCCATAAGAAAGAAGGAGACGATTTTGTCTTTGACAACTCTCCC    300

BSNT_06104___    301 GAATTTCTAAAAAAATCAGTTGATGAAAGCCTAAAGCGCTTGAATACCGA    350
                     |.||||.|.|||||.||.||.||.||||||||.|||||..||.|.||.||
BL00183___iol    301 GCATTTTTGAAAAAGTCCGTCGAAGAAAGCCTGAAGCGGCTGCAAACTGA    350

BSNT_06104___    351 TTATATTGATTTGTTCTACATTCACTTCCCTGACGAACATACGCCGAAGG    400
                     .||.||.||..|.|||||.||.||.||.|||||.|||.||||||||||.|
BL00183___iol    351 CTACATCGACCTTTTCTATATCCATTTTCCTGATGAAAATACGCCGAAAG    400

BSNT_06104___    401 ATGAAGCCGTTAACGCATTGAATGAGATGAAGAAAGCCGGAAAAATCCGC    450
                     |.|||||.|||.|.||..|..||||..|||||.|.|..||.||||||.|.
BL00183___iol    401 ACGAAGCGGTTCAGGCGCTCCATGAACTGAAGCAGGAAGGCAAAATCAGA    450

BSNT_06104___    451 TCCATCGGTGTATCCAACTTCTCTTTAGAGCAATTGAAAGAAGCAAACAA    500
                     .|.|||||||||||||||||.|||.|.|||||..||||||||||.|||||
BL00183___iol    451 GCAATCGGTGTATCCAACTTTTCTCTTGAGCAGCTGAAAGAAGCGAACAA    500

BSNT_06104___    501 AGACGGTTTGGTAGATGTATTGCAAGGCGAATACAACCTGTTAAACCGTG    550
                     ||||||.|||||.|||||..|.||||||||||||||||||.|.|||.|.|
BL00183___iol    501 AGACGGATTGGTGGATGTGCTCCAAGGCGAATACAACCTGCTGAACAGGG    550

BSNT_06104___    551 AAGCGGAAAAAACATTCTTCCCGTATACGAAGGAGCATAACATTTCATTT    600
                     ||||.||.|..|||||||||||||||||..|||||||||||||.||||||
BL00183___iol    551 AAGCTGAGACGACATTCTTCCCGTATACACAGGAGCATAACATCTCATTT    600

BSNT_06104___    601 ATCCCTTACTTCCCGCTCGTATCAGGTTTATTGGCAGGAAAGTATACA--    648
                     .|.|||||||||||||||||.||.||.||..|.||.|||||  |||||  
BL00183___iol    601 GTTCCTTACTTCCCGCTCGTCTCCGGATTGCTCGCCGGAAA--ATACAGC    648

BSNT_06104___    649 GAAGATACAACGTTCCCAGAAGGCGACCTGCGAAACGAACAGGAACACTT    698
                     |||||||||||||||||.||||||||||||.|||..|||..||||.||||
BL00183___iol    649 GAAGATACAACGTTCCCGGAAGGCGACCTGAGAAGAGAAATGGAAAACTT    698

BSNT_06104___    699 CAAGGGCGAGCGTTTCAAAGAAAATATCAGAAAGGTCAACAAGCTTGCGC    748
                     |.|.|||||.||.|||||||||||.||.|||||.||.|||.|||||||||
BL00183___iol    699 CCAAGGCGAACGCTTCAAAGAAAACATTAGAAAAGTGAACCAGCTTGCGC    748

BSNT_06104___    749 CGATTGCCGAAAAACACAACGTGGATATCCCTCACATCGTATTGGCCTGG    798
                     ||||.||.||||||||.||.||.||.|||.|.||.|||||.|||||||||
BL00183___iol    749 CGATCGCGGAAAAACATAATGTCGACATCGCCCATATCGTCTTGGCCTGG    798

BSNT_06104___    799 TATTTAGCAAGACCGGAAATTGATATTTTAATCCCTGGAGCAAAACGTGC    848
                     ||.||.||..|.||.|||||.||..|.||.|||||.||.||.|||||.||
BL00183___iol    799 TACTTGGCGCGGCCTGAAATCGACGTGTTGATCCCGGGCGCCAAACGCGC    848

BSNT_06104___    849 CGATCAGCTGATTGATAACATTAAAACAGCCGACGTGACGCTTTCTCAAG    898
                     .|||||||||||.||.|||.|.|||||.||.||.||.|..||.|||||||
BL00183___iol    849 TGATCAGCTGATCGACAACCTCAAAACGGCAGAAGTCAATCTGTCTCAAG    898

BSNT_06104___    899 AAGATATTTCGTTTATTGATAAGCTGTT----CGCATAA    933
                     |.||.|||...||.||.||...||||||    ||| |||
BL00183___iol    899 AGGACATTGATTTCATCGACCGGCTGTTTGCCCGC-TAA    936


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