Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00376 and BL00184
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_00376___glpQ.1.5803.seq
# -bsequence dna-align/BL00184___glpQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00376___glpQ-BL00184___glpQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00376___glpQ-BL00184___glpQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00376___glpQ
# 2: BL00184___glpQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 977
# Identity: 594/977 (60.8%)
# Similarity: 594/977 (60.8%)
# Gaps: 178/977 (18.2%)
# Score: 1643.0
#
#
#=======================================
BSNT_00376___ 1 ATGAGAAAAAATAG----------------AATACTGGCCTTGTTTGTTC 34
|||| |||.|.||| .|||..|||| .|
BL00184___glp 1 ATGA-AAAGACTAGTCCGCAGCATCTTCCTTATAACGGCC--------GC 41
BSNT_00376___ 35 TGTCGCTGGGCTTACTCTCATTTATGG--TAACGCCAGTGTCGGCA---- 78
..|||||| ||.|...||.||| | |||.| ||||
BL00184___glp 42 AATCGCTG------CTTTTGGTTTTGGATT-----CAGCG--GGCATGCG 78
BSNT_00376___ 79 ---GCGTCAAAAGGAAA---CCTGCTGTCACCTGA--CCGTA-----TCC 115
|||.||| |..| ||.||.| ||.||.| |||.| |.|
BL00184___glp 79 GAGGCGGCAA---GCCATTCCCAGCCG-CAGCTCAATCCGAACAAGCTAC 124
BSNT_00376___ 116 TGACCGTCGCGCACAGAGGGGCTTCTGGATATGTGCCTGAGCACACGATT 165
|.|..|||||||||.|.||.||.||.||..|||..||.|||||||||.||
BL00184___glp 125 TAAATGTCGCGCACCGCGGCGCATCGGGGCATGCTCCCGAGCACACGCTT 174
BSNT_00376___ 166 CTGTCTTACGAAACCGCT----CAGAAAATGAAAGCTGATTATATTGAAT 211
.||.||||..| ||| ||.||||||||||..|||||.||.|||.
BL00184___glp 175 TTGGCTTATAA----GCTTGGACAAAAAATGAAAGGCGATTACATAGAAA 220
BSNT_00376___ 212 TGGATCTGCAAATGACAAAAGACGGAAAATTGATTGTCATGCATGACGAA 261
|.|||||.|||||||||||||||||..|.|||.|.|.||||||.||.||.
BL00184___glp 221 TCGATCTTCAAATGACAAAAGACGGCCACTTGGTCGCCATGCACGATGAG 270
BSNT_00376___ 262 AAACTGGACCGCACCACAAACGGAATGGGTTGGGTGAAAGACCATACGCT 311
|.|.||||.||.||.||.||.||.|.|||||..||.||||||.|||||||
BL00184___glp 271 ACATTGGATCGTACGACTAATGGTACGGGTTTTGTCAAAGACTATACGCT 320
BSNT_00376___ 312 CGCAGACATTAAGAAGCTTGACGCCGGTTCTTGGTTTAATGAAGCCTATC 361
...|||.||.||..|||||||.||.||.||.||||||||.|||||.||||
BL00184___glp 321 GAAAGAAATCAAAGAGCTTGATGCAGGCTCCTGGTTTAACGAAGCATATC 370
BSNT_00376___ 362 CGGAAAAAGCAAAGCCGCAGTACGTCGGCCTTAAAGTTCCTACATTAGAA 411
|.||....|||||.|||.||||||.|||.||.|||||.||.||..|.|||
BL00184___glp 371 CTGAGCGGGCAAAACCGGAGTACGCCGGGCTGAAAGTGCCCACCCTTGAA 420
BSNT_00376___ 412 GAGGT-ATTAGACCGTTTCGGA-AAGCACGCGAACTACTACATTGAAACA 459
||..| ||...|.|.||..||| ||||.|||| ||||||.||.||||||
BL00184___glp 421 GAAATCATCCAAACATTCGGGAGAAGCGCGCG--CTACTATATCGAAACA 468
BSNT_00376___ 460 AAATCGCCTGACACCTA--CCCAGGTATGGAAGAAAAACTGATCGCTTCT 507
|||||.||.||...||| ..|| |||||||||||| |||.||
BL00184___glp 469 AAATCACCGGAAGACTATGATCA--TATGGAAGAAAA-------GCTCCT 509
BSNT_00376___ 508 -------TTGCAGAAACATAAATT-ACTGGGGAAG-CATTCTAAGCCAGG 548
.||.||.||.|.||||| ||.||.|.|| ||||| |..||.|
BL00184___glp 510 GGACATCCTGAAGCAATACAAATTGACCGGAGCAGACATTC--ATTCAAG 557
BSNT_00376___ 549 CCAGGTGATCATTCAATCGTTCAGCAAAGAAAGCCTGGTAAAAGTCCATC 598
|.|.||.|||||||||||.||.||....|||||| .|||||.| |||.
BL00184___glp 558 CAAAGTCATCATTCAATCTTTTAGTCCTGAAAGC---TTAAAAAT-CATT 603
BSNT_00376___ 599 AATTAC----AGCCAAACCTGCCGACCGTTCAATTGCTGGAAGCCAAACA 644
.||.|| |.||||||.|.|||...||.|||||..|
BL00184___glp 604 CATAACGCTAATCCAAACATTCCGCTAGTGCAATTATT------------ 641
BSNT_00376___ 645 AATGG--CGTCAATGACAGATGCTGCC----CTGGAAG--AAATCAAAAC 686
|||| ||.||| |..||||||| || ||.| .|||.|||||
BL00184___glp 642 -ATGGTACGACAA----ACCTGCTGCCATTACT-GACGCCGAATTAAAAC 685
BSNT_00376___ 687 A----------TAC-GCTGTCGGTGCGGGCCCGGATTATAAAGCTTTAA- 724
| ||| || |||||....||| ||.|| ||||.|
BL00184___glp 686 AATATCAATCTTACAGC-GTCGGACTCGGC-------ATGAA-CTTTGAC 726
BSNT_00376___ 725 ---AT----CAAGAAAACGTCCGTATGATCCGCAGCCACGGCCTCCTGCT 767
|| |..|.|.||||.|..|.|||.||..||..||||.|.|||.|
BL00184___glp 727 CGCATTGGCCGGGCATACGTGCAAAAGATTCGACGCACCGGCATGCTGGT 776
BSNT_00376___ 768 TCATCCTTACACAGTCAATAATGAAGCTGATATGCATCGCCTGCTTGATT 817
.||||||||.||.||.|||||..|||..||||||.|.||.|||||.||||
BL00184___glp 777 CCATCCTTATACTGTGAATAAAAAAGAAGATATGAAGCGGCTGCTCGATT 826
BSNT_00376___ 818 GGGGCGTAACAGGAGTGTTCACCAACTATCC------------TGATCTT 855
||||.|..||.|||.||||||||||||.||| .|||.||
BL00184___glp 827 GGGGAGCGACCGGAATGTTCACCAACTTTCCGGACCGGCTGCGCGATGTT 876
BSNT_00376___ 856 TTCCACAAAGTAAAAAAGGGTTATTAA 882
||.|.| |.|||.||| |||
BL00184___glp 877 TTGCGC---GAAAAGAAG------TAA 894
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