Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06147 and BL00201
See
Amino acid alignment /
Visit
BSNT_06147 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:08
# Commandline: needle
# -asequence dna-align/BSNT_06147___ahpF.1.5803.seq
# -bsequence dna-align/BL00201___ahpF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06147___ahpF-BL00201___ahpF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06147___ahpF-BL00201___ahpF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06147___ahpF
# 2: BL00201___ahpF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1534
# Identity: 1279/1534 (83.4%)
# Similarity: 1279/1534 (83.4%)
# Gaps: 8/1534 ( 0.5%)
# Score: 5365.0
#
#
#=======================================
BSNT_06147___ 1 TTGGTACTTGATGCAAACATCAAAGCACAATTAAATCAATATATGCAGCT 50
|||||||||||.|||||.|||||||||||||||||.|||||.||||||.|
BL00201___ahp 1 TTGGTACTTGAAGCAAATATCAAAGCACAATTAAACCAATACATGCAGAT 50
BSNT_06147___ 51 AATTGAGAATGACATTGTTCTCAAAGTTAGCGCAGGCGAAGATGACACT- 99
.|||||.||||||||.||.||.|||||.||.|||||| |||||||.|
BL00201___ahp 51 GATTGAAAATGACATCGTCCTTAAAGTCAGTGCAGGC---GATGACAGTG 97
BSNT_06147___ 100 --TCTAAGGACATGCTGGCTCTCGTTGATGAGCTGGCTTCCATGTCATCG 147
||||||||.|||||||||||.||.||.||||||||||||||||||||.
BL00201___ahp 98 TCTCTAAGGATATGCTGGCTCTTGTAGAAGAGCTGGCTTCCATGTCATCA 147
BSNT_06147___ 148 AAAATTTCAGTTGAAAAAGCTGAATTAAACAGAACGCCGAGCTTCAGTGT 197
|||||..|.||||||||.||..|..|..||||||||||.||||||||.||
BL00201___ahp 148 AAAATCACTGTTGAAAAGGCGCAGCTCGACAGAACGCCAAGCTTCAGCGT 197
BSNT_06147___ 198 CAATCGTGTCGGAGAAGACACTGGCGTGACTTTCGCCGGTATCCCTCTGG 247
||||||||.||.||||||.||.||||||||.||||||||..|.||.||.|
BL00201___ahp 198 CAATCGTGCCGAAGAAGATACAGGCGTGACATTCGCCGGGGTTCCGCTCG 247
BSNT_06147___ 248 GCCACGAATTCACATCATTAGTGTTGGCGTTGCTCCAAGTGAGCGGCAGA 297
|.||||||||||||||.||.|||.||||..|..|.|||||.|||||||||
BL00201___ahp 248 GTCACGAATTCACATCTTTGGTGCTGGCACTCTTGCAAGTAAGCGGCAGA 297
BSNT_06147___ 298 CCGCCTAAGGTGGACCAAAAAGTCATTGATCAGGTGAAGAAGATCAGTGG 347
|||||.||.||.||.||||||.||||.|||||..|.|||||.|||||.||
BL00201___ahp 298 CCGCCGAAAGTCGATCAAAAAATCATCGATCAAATCAAGAACATCAGCGG 347
BSNT_06147___ 348 TGAATACCACTTCGAATCTTATATCAGCCTGACATGCCACAACTGTCCTG 397
.||.||||.|||||||||||||||||||||.||||||||||||||.||.|
BL00201___ahp 348 CGAGTACCGCTTCGAATCTTATATCAGCCTCACATGCCACAACTGCCCGG 397
BSNT_06147___ 398 ATGTTGTACAAGCTTTAAATATGATGAGCGTGCTGAACCCGAACATTACG 447
|||||||.||.||.||.||.||||||||||||||.|||||||||||..|.
BL00201___ahp 398 ATGTTGTGCAGGCATTGAACATGATGAGCGTGCTCAACCCGAACATCTCT 447
BSNT_06147___ 448 CACACGATGATTGACGGTGCAGCATACAAAGCAGAAGTTGAAAGCAAAAA 497
|||||.|||||.||||||||.||||||||..|||||||.|||||||||||
BL00201___ahp 448 CACACAATGATCGACGGTGCGGCATACAAGTCAGAAGTCGAAAGCAAAAA 497
BSNT_06147___ 498 CATCATGGCAGTGCCGACCGTTTACCTGAATGGCGAATCCTTCGGAAGCG 547
|||.|||||.|||||||||||.|||.||||.|||||||||||.|||||||
BL00201___ahp 498 CATTATGGCTGTGCCGACCGTATACTTGAACGGCGAATCCTTTGGAAGCG 547
BSNT_06147___ 548 GCCGTATGACGCTTGAAGAAATTCTTGCGAAAATGGGCAGCGGCACAGAT 597
||||.||||||||||||||||||||||||||.||||||||||||||||||
BL00201___ahp 548 GCCGAATGACGCTTGAAGAAATTCTTGCGAAGATGGGCAGCGGCACAGAT 597
BSNT_06147___ 598 GCATCTGAGTTTGCTGACAAAGAGCCGTTTGACGTTCTTGTGGTCGGAGG 647
||.||||||.||.||||.|||||.|||||.||.||.||.||.||||||||
BL00201___ahp 598 GCGTCTGAGCTTTCTGATAAAGAACCGTTCGATGTACTCGTTGTCGGAGG 647
BSNT_06147___ 648 CGGACCTGCTGGTGCAAGTGCAGCGATCTACACTGCACGTAAAGGCATCC 697
|||.|||||.||.||.||.|||||.|||||..|.||.||.||||||||||
BL00201___ahp 648 CGGGCCTGCCGGCGCCAGCGCAGCAATCTATGCGGCGCGCAAAGGCATCC 697
BSNT_06147___ 698 GCACTGGTGTTGTCGCTGAGCGCTTCGGCGGACAGGTGCTCGACACCATG 747
|.||.||..|.||.||.||.|||||||||||.||.||.||.|||||.|||
BL00201___ahp 698 GTACGGGAATCGTTGCCGAACGCTTCGGCGGCCAAGTCCTTGACACGATG 747
BSNT_06147___ 748 AGCATCGAAAACTTCATCAGCGTCAAAGCG-ACGGAAGGACCGAAGCTTG 796
||||||||.|||||||||||||| .||||| ||.|||||.||.|||||||
BL00201___ahp 748 AGCATCGAGAACTTCATCAGCGT-GAAGCGCACCGAAGGGCCTAAGCTTG 796
BSNT_06147___ 797 CGGCAAGTCTTGAAGAGCATGTGAAGGAATATGATATTGATGTCATGAAC 846
|||||||.||||||||.||.||||||||.||||||||.||.|||||||||
BL00201___ahp 797 CGGCAAGCCTTGAAGAACACGTGAAGGATTATGATATCGACGTCATGAAC 846
BSNT_06147___ 847 CTTCAGCGTGCGAAACGCCTTGAGAAGAAAGATCTGTTCGAACTTGAACT 896
||.||.||.||.|||.||||.|||||.|||||.||.|||.|.||.|||||
BL00201___ahp 847 CTGCAACGAGCAAAAGGCCTCGAGAAAAAAGACCTTTTCCATCTAGAACT 896
BSNT_06147___ 897 CGAAAACGGCGCTGTTCTGAAAAGTAAAACAGTGATCCTTTCAACAGGTG 946
|||||||||||||||||||||.||.|||||.||.||.||||||||.||.|
BL00201___ahp 897 CGAAAACGGCGCTGTTCTGAAGAGCAAAACCGTCATTCTTTCAACTGGCG 946
BSNT_06147___ 947 CACGCTGGCGCAATGTCAACGTACCAGGTGAACAAGAGTTCAAAAACAAA 996
||||||||||||||.||..||||||.||.|||||||||||||||||||||
BL00201___ahp 947 CACGCTGGCGCAATATCGGCGTACCCGGCGAACAAGAGTTCAAAAACAAA 996
BSNT_06147___ 997 GGTGTCGCATACTGCCCGCACTGTGATGGGCCATTGTTTGAAGGCAAAGA 1046
|||||||||||||||||.||||||||.||.||||||||||||||||||||
BL00201___ahp 997 GGTGTCGCATACTGCCCTCACTGTGACGGACCATTGTTTGAAGGCAAAGA 1046
BSNT_06147___ 1047 CGTTGCGGTAATCGGCGGCGGAAACTCTGGTATCGAAGCAGCGATTGATC 1096
|||.||.||.|||||||||||.|||||.||.||||||||.||||||||.|
BL00201___ahp 1047 CGTCGCCGTCATCGGCGGCGGCAACTCCGGCATCGAAGCGGCGATTGACC 1096
BSNT_06147___ 1097 TTGCAGGTATTGTCAATCACGTTACTGTACTAGAATTCGCGCCGGAACTG 1146
|||||||.||.|||||.||.||.|||||.||.||.||.||||||||.|||
BL00201___ahp 1097 TTGCAGGCATCGTCAACCATGTGACTGTTCTTGAGTTTGCGCCGGAGCTG 1146
BSNT_06147___ 1147 AAAGCAGACGAAGTCCTGCAAAAACGTCTCTACAGCCTGCCTAACGTTAC 1196
|||||||||.||||.|||||||||||||||||||||||.||.|||||.||
BL00201___ahp 1147 AAAGCAGACAAAGTTCTGCAAAAACGTCTCTACAGCCTCCCCAACGTGAC 1196
BSNT_06147___ 1197 TGTCGTGAAAAACGCACAAACAAAAGAAATCACAGGTGATCAGAGTGTTA 1246
|||||||||||||||.|||||||||||||||||.||.|||.|.|..||.|
BL00201___ahp 1197 TGTCGTGAAAAACGCCCAAACAAAAGAAATCACGGGCGATGAAAACGTAA 1246
BSNT_06147___ 1247 ACGGCATCACATATGTAGACCGCGAAACAGGCGAAGAAAAACACGTTGAA 1296
|||||||.||.||.||||||||.||||||||.||||||||||||||.||.
BL00201___ahp 1247 ACGGCATTACTTACGTAGACCGTGAAACAGGAGAAGAAAAACACGTCGAG 1296
BSNT_06147___ 1297 CTTCAAGGTGTATTCGTCCAAATCGGTCTCGTGCCAAACACAGAATGGTT 1346
||.|||||.||.|||||||||||||||||.|||||.|||||.||||||.|
BL00201___ahp 1297 CTCCAAGGCGTCTTCGTCCAAATCGGTCTTGTGCCGAACACGGAATGGCT 1346
BSNT_06147___ 1347 AGAAGGAACGGTTGAACGCAACCGCATGGGCGAAATCATCGTCGACAAAC 1396
....|.|||.||.||||||||||||||.|||||||||...||||||||||
BL00201___ahp 1347 GCCTGAAACCGTCGAACGCAACCGCATCGGCGAAATCGCAGTCGACAAAC 1396
BSNT_06147___ 1397 ATGGCGCAACAAGCGTACCAGGCTTATTTGCTGCCGGCGACTGCACAGAC 1446
..||||.|||||.|.|.||.||.||.||.|||||||||||||||||||||
BL00201___ahp 1397 GCGGCGAAACAACCATCCCTGGATTGTTCGCTGCCGGCGACTGCACAGAC 1446
BSNT_06147___ 1447 AGTGCGTACAACCAAATTATTATTTCTATGGGATCAGGTGCAACTGCCGC 1496
||..|||||||||||||.||.|||||.||||||||.||.||||..||.||
BL00201___ahp 1447 AGCCCGTACAACCAAATCATCATTTCCATGGGATCCGGAGCAAACGCTGC 1496
BSNT_06147___ 1497 CCTCGGCGCGTTTGATTACCTAATCCGTAACTGA 1530
..|.|||||||||||.|||||.||.||.||.|.|
BL00201___ahp 1497 TTTAGGCGCGTTTGACTACCTGATTCGGAATTAA 1530
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.