Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05150 and BL00207
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:16
# Commandline: needle
# -asequence dna-align/BSNT_05150___yvfU.1.5803.seq
# -bsequence dna-align/BL00207___yvfU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05150___yvfU-BL00207___yvfU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05150___yvfU-BL00207___yvfU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05150___yvfU
# 2: BL00207___yvfU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 637
# Identity: 439/637 (68.9%)
# Similarity: 439/637 (68.9%)
# Gaps: 68/637 (10.7%)
# Score: 1460.5
#
#
#=======================================
BSNT_05150___ 1 ATGATTCGTCTGTTTATTGCTGAGGACCAGCGAATGCTTTTAGGCGCTTT 50
|||||||||.|.||||||||.||.|||||..|||||||.|||.||||..|
BL00207___yvf 1 ATGATTCGTTTATTTATTGCCGAAGACCAAAGAATGCTGTTAAGCGCGCT 50
BSNT_05150___ 51 GGGATCTTTGCTTGATTTAGAAGAGGATATGACAGTCATCGGACAAGCAT 100
||||||.|||||||||.|.|||||.||.|||..|||.|||||.||.||..
BL00207___yvf 51 GGGATCCTTGCTTGATCTTGAAGAAGACATGGAAGTGATCGGCCAGGCGA 100
BSNT_05150___ 101 TAAACGGGGAAGAGGCGCTACA-TGCTATTTTGAAGCTGGAGCCGGATGT 149
.||||||.|||||.||||| || .||.|||.|||||||.||.|||||.||
BL00207___yvf 101 CAAACGGCGAAGAAGCGCT-CACCGCCATTCTGAAGCTAGAACCGGACGT 149
BSNT_05150___ 150 ATGCATTATGGACATTGAAATGCCGGTTCGAAGCGGGCTGGATGTGGCAG 199
.|||.|.|||||.||.|||||||||||...||||||.|||||.|||||.|
BL00207___yvf 150 CTGCCTCATGGATATCGAAATGCCGGTCAAAAGCGGACTGGAAGTGGCCG 199
BSNT_05150___ 200 AGGAATTAATGAAAAAAGGCTGCGTC--AGCAAGG--------------T 233
|.|| ||| || | ||||||| |
BL00207___yvf 200 AAGA--------------GCT-CG-CAAAGCAAGGCGCAAAAACGAAAAT 233
BSNT_05150___ 234 CATTATTTTAACCACCTTTGCTCGCCCCGGATATTTTGAACGCGCCGT-- 281
|||.||..||||.||.|||||.||.|||||.||.||.|||||||||||
BL00207___yvf 234 CATCATCCTAACGACGTTTGCGCGTCCCGGCTACTTCGAACGCGCCGTCA 283
BSNT_05150___ 282 AAAGGCCGGTGCACATGGCTATCTGCTGAAAGACGGCGAAATTGACGATC 331
|||| |..||..||.|||||.|||||.||.|||||.|||||.|||||||
BL00207___yvf 284 AAAG--CAATGTCCACGGCTACCTGCTCAAGGACGGGGAAATCGACGATC 331
BSNT_05150___ 332 TGGCCGATGCCATTCGAAAATGTGTA---AAGGGAAAACGTGTCTTCAGC 378
|.||.||.|||||.|||||| ||.| ||||.|||| |...|||.||.
BL00207___yvf 332 TCGCAGACGCCATCCGAAAA--TGCACGGAAGGCAAAA-GAACCTTTAGT 378
BSNT_05150___ 379 CCTGAGCTGACGTTTAATATGAT----GCGAGACGAAAATCCGCTAACCG 424
||.||.||.||.||.| |.|.| ||||.|| |||.|||||.||||
BL00207___yvf 379 CCGGAACTTACCTTCA--ACGCTGTCCGCGAAAC--AAACCCGCTCACCG 424
BSNT_05150___ 425 TTAGAGAGCAAGAAATTCTGAGGCTTGCGGC-------TTTAGGCAAGAC 467
...|.||.||.||.|| ||||||.| |.|.||.|||||
BL00207___yvf 425 AACGCGAACAGGACAT-------CTTGCGACTGGCATATATCGGAAAGAC 467
BSNT_05150___ 468 AACAAAAGACATTACGCTGGAGCTCTATTTATC-TCAAGGCACAGTTCGA 516
.||||||||.|||.|...||||||.|..||.|| || |||.||.||.||.
BL00207___yvf 468 GACAAAAGAAATTTCTGAGGAGCTTTTCTTGTCGTC-AGGGACCGTCCGG 516
BSNT_05150___ 517 AACTATATCTCAGAAATCATCCAAAAGCTTCATGCGAAAAATCGGACAGA 566
||.|||||.||.||.||.||.||.|||||..||||||||||.||||..||
BL00207___yvf 517 AATTATATTTCTGAGATTATGCAGAAGCTGGATGCGAAAAACCGGATGGA 566
BSNT_05150___ 567 AGCCGCCAGCATTGCTGAGGAAAAGGGCTGGATTTAA 603
|||.||.||.|||||.||||..||.||.|||||||.|
BL00207___yvf 567 AGCGGCAAGGATTGCGGAGGGGAAAGGATGGATTTGA 603
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