Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06027 and BL00213
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:03
# Commandline: needle
# -asequence dna-align/BSNT_06027___bglP.1.5803.seq
# -bsequence dna-align/BL00213___bglP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06027___bglP-BL00213___bglP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06027___bglP-BL00213___bglP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06027___bglP
# 2: BL00213___bglP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1907
# Identity: 1372/1907 (71.9%)
# Similarity: 1372/1907 (71.9%)
# Gaps: 139/1907 ( 7.3%)
# Score: 4714.5
#
#
#=======================================
BSNT_06027___ 1 ATGGATTATGATAAATTATCGAAGGACATATTACAACTCGTAGGCGGTGA 50
|||||||||.|||||.|||||||||||||.|||||||||||.||||||||
BL00213___bgl 1 ATGGATTATAATAAAGTATCGAAGGACATTTTACAACTCGTGGGCGGTGA 50
BSNT_06027___ 51 AGACAACGTTCAGCGCGTGATTCACTGCATGACGAGGCTGCGTTTTAATC 100
|||.|||||.|||.|||||||||||||||||||.||.||||||||.||||
BL00213___bgl 51 AGAGAACGTACAGAGCGTGATTCACTGCATGACAAGACTGCGTTTCAATC 100
BSNT_06027___ 101 TTCATGACAACGCGAAGGCGGATCGCAGTCAGCTGGAGCAG-CTGCCGGG 149
||.|||||||.||||||||.||.|||....|.||||| .|| ||.||||.
BL00213___bgl 101 TTTATGACAATGCGAAGGCAGACCGCGCGAAACTGGA-AAGTCTTCCGGC 149
BSNT_06027___ 150 GGTGATGGGCACCAATATCAGCGGCGAGCAGTTTCAAATCATTATCGGAA 199
.||.|||||||||||.|||||||||.||||||||||||||||.||.||||
BL00213___bgl 150 TGTAATGGGCACCAACATCAGCGGCCAGCAGTTTCAAATCATCATTGGAA 199
BSNT_06027___ 200 ACGATGTGCCGAAGGTGTATCAGGCGAT--TGTGCGGC-AGAGCAATCTC 246
|.|||||.||.|||||||||.|.||||| | ||| | |.|||...|||
BL00213___bgl 200 ATGATGTCCCTAAGGTGTATAAAGCGATCAT-TGC--CAACAGCGGGCTC 246
BSNT_06027___ 247 AGTGATGAAAA-------GAGC-----GCTGGTTCATCCTCTCAGAAA-A 283
||.|||||||| |||| ||||| ||.||| |
BL00213___bgl 247 AGCGATGAAAAAGCGGGCGAGCAGCAAGCTGG----------CAAAAAGA 286
BSNT_06027___ 284 AGAATGTGCTGAGTGCGGTCTTTGATGTGATTTCTGGGGTGTTTACTCCG 333
|.||.||||||...||..|.|||||||||||.||.||.||.|||||.|||
BL00213___bgl 287 AAAACGTGCTGTCCGCCATTTTTGATGTGATATCAGGCGTATTTACGCCG 336
BSNT_06027___ 334 ATTCTGCCTGCGATTGCGGGGGCGGGGATGATCAAAGGGCTTGTTGCGCT 383
|||||.||.|||||.||.||.|||||.||||||||.|||.|..||||..|
BL00213___bgl 337 ATTCTCCCGGCGATCGCCGGAGCGGGTATGATCAAGGGGATCATTGCAAT 386
BSNT_06027___ 384 GGCAGTTACGTTTGGCTGGATG-GCGGAGAAGAGCCAGGTTCATGTCATT 432
.||.||.|||||.||||||||| || ||.|..||||||||.||...||||
BL00213___bgl 387 CGCCGTCACGTTCGGCTGGATGAGC-GAAACTAGCCAGGTCCACACCATT 435
BSNT_06027___ 433 TTGACGGCTGTCGGTGACGGTGCGTTCTACTTCCTGCCGCTCCTGCTAGC 482
||..|.||..||||.|||||.||.||.||||||||||||.|..||||.||
BL00213___bgl 436 TTATCCGCCATCGGCGACGGAGCATTTTACTTCCTGCCGATTTTGCTGGC 485
BSNT_06027___ 483 GATGAGTGCGGCGAGAAAATTCGGAAGCAATCCGTACGTAGCGGCAGCCA 532
|.|.|||||.||||||||||||||.||.|||||.||.||.|||||.||.|
BL00213___bgl 486 GGTCAGTGCCGCGAGAAAATTCGGCAGTAATCCTTATGTTGCGGCGGCGA 535
BSNT_06027___ 533 TTGCGGCGGCGATCCTGCATCCGGATTTGACAGCCCTGCTCGGTGCGGGG 582
|.|..||||||||.||||||||.|||.|||||||.||.||||||.|.|||
BL00213___bgl 536 TCGGAGCGGCGATTCTGCATCCCGATCTGACAGCGCTTCTCGGTTCAGGG 585
BSNT_06027___ 583 AAACCGATTTCCTTTATCGGGCTTCCTGTAACCGCTGCCACTTATTCGTC 632
|||...|||||||||.||||..|.||||||||||||||||||||||||||
BL00213___bgl 586 AAAAGCATTTCCTTTGTCGGATTGCCTGTAACCGCTGCCACTTATTCGTC 635
BSNT_06027___ 633 AACGGTCATCCCGATTTTGCTGGCGATATGGATTGCTTCATACGTGGAAA 682
.||.|||||.|||||..||||.|||||.||||||||.||.|||||.||.|
BL00213___bgl 636 GACCGTCATTCCGATCCTGCTCGCGATTTGGATTGCATCTTACGTTGAGA 685
BSNT_06027___ 683 AATGGATTGACCGTTTTACACACG-CATCTCTCAAATTGATTGTGGTTCC 731
|||||||||||....|.|| |.|| |.||..|.||..|||||.|.||.||
BL00213___bgl 686 AATGGATTGACAAAGTCAC-CCCGACTTCGTTGAAGATGATTTTTGTACC 734
BSNT_06027___ 732 GACATTCACGCTATTGATTGTCGTGCCGCTGACATTGATTACAGTCGGTC 781
|||..|.|||||..||.||||||||||..|.|||||.|||||.|||||||
BL00213___bgl 735 GACGCTGACGCTGCTGGTTGTCGTGCCTGTCACATTAATTACGGTCGGTC 784
BSNT_06027___ 782 CGCTTGGCGCTATTTTAGGAGAA-TACTTGTC-TTCTGGGGTCAATTATT 829
||||.||.||.|||..||| ||| ||..|||| .|| ||.||.||...||
BL00213___bgl 785 CGCTCGGTGCGATTGCAGG-GAACTATCTGTCAATC-GGTGTGAACGGTT 832
BSNT_06027___ 830 TGTTTGATCATGCAGGGCTTGTGGCGATGAT--TTTGCTGGCGGGTACAT 877
|.|||||..||||.||..|..|..||||||| ||| |.||.||.||.|
BL00213___bgl 833 TATTTGAAAATGCCGGTTTAATCACGATGATCCTTT--TAGCAGGAACGT 880
BSNT_06027___ 878 TCTCTTTAATCATTATGACGGGCATGCACTATGCCTTTGTGCCGATTATG 927
||||..|.|||.|.|||||.||.|||||||||||.||..|.|||.|||||
BL00213___bgl 881 TCTCGCTGATCGTCATGACAGGAATGCACTATGCTTTCATTCCGGTTATG 930
BSNT_06027___ 928 ATCAACAACATCGCTCAAAACGGCCACGATTATTTACTGCCGGCTATGTT 977
.||||||||||..|.|||||||||.|||||||.||..|.||.||.|||||
BL00213___bgl 931 TTCAACAACATTACGCAAAACGGCTACGATTACTTGATACCTGCGATGTT 980
BSNT_06027___ 978 TTTGGCGAATATGGGGCAGGCGGGAGCATCATTTGCAGTCTTCCTTCGCT 1027
.||||||||||||||||||||.||.||.||||||||.||||||||.||.|
BL00213___bgl 981 CTTGGCGAATATGGGGCAGGCTGGCGCGTCATTTGCCGTCTTCCTGCGAT 1030
BSNT_06027___ 1028 CCAGAAACAAAAAATTTAAATCACTCGCGCTTACCACAAGCATCACGGCG 1077
|||||||.||.|||||.||||||.|..||||.||.||||||||||||||.
BL00213___bgl 1031 CCAGAAATAAGAAATTCAAATCATTGTCGCTGACGACAAGCATCACGGCT 1080
BSNT_06027___ 1078 CTGATGGGGATCACAGAACCTGCAATGTACGGCGTGAATATGCGATTGAA 1127
.||||||||||.|||||.||.||.||||||||.||.||.|||.|..||||
BL00213___bgl 1081 TTGATGGGGATTACAGAGCCGGCGATGTACGGTGTCAACATGAGGCTGAA 1130
BSNT_06027___ 1128 AAAGCCGTTTG----CGGCCGCTTTGATTGGCGGTGCAGCCGGTGGCGCG 1173
||||||||||| || ||||| .|.||||..||.|.|||.||.||.
BL00213___bgl 1131 AAAGCCGTTTGTATCCG--CGCTT--CTCGGCGCCGCTGTCGGAGGAGCA 1176
BSNT_06027___ 1174 TTTTACGGCATGACGGGTGTTGCTTCCTATATCGTCGGGGGGAATGCAGG 1223
|||||||||||.||.||.||.||..|.|||||..|.||.||.||.|..||
BL00213___bgl 1177 TTTTACGGCATCACCGGCGTAGCAGCATATATTATTGGCGGAAACGTCGG 1226
BSNT_06027___ 1224 TCTCCCGAGCATCCCTGTC-TTTATCGGCCCAACGTTTATTTACGCGATG 1272
|.|.|||.|.||..| |.| |||||||||||.||.|||||..|.||.|||
BL00213___bgl 1227 TTTGCCGGGAATTAC-GACGTTTATCGGCCCGACTTTTATACAGGCAATG 1275
BSNT_06027___ 1273 ATCGGCCTTGTGATTGCG---TTTGCGGCGGGAACAGCAGCTGCGTATTT 1319
|||||..|.||.||.||| |||||.|| |||.|| .|||
BL00213___bgl 1276 ATCGGTATCGTCATCGCGTTCTTTGCCGC---AACGGC--------GTTT 1314
BSNT_06027___ 1320 GCTT--------GGATTCGAGGATGTGCCTTCTGACGGCAGCC------- 1354
|||| ||.||.||.||..|.|||||.|| .|.||||
BL00213___bgl 1315 GCTTTTGTATTGGGGTTTGAAGACATTCCTTCAGA-TGAAGCCGCTGAAC 1363
BSNT_06027___ 1355 -AGCAGCCGGCAGTGCAT-----GAGGGCAGC-AGAGAGATCATTCACAG 1397
||.||||| .|.||| |.|||| || .|||||||||||||.||
BL00213___bgl 1364 AAGGAGCCG---CTCCATCTGAAGCGGGC-GCGGGAGAGATCATTCAAAG 1409
BSNT_06027___ 1398 CCCGATTAAGGGAGAAGTGAAAGCCTTAAGTGAAGTCAAAGATG-GAGTA 1446
||||.|.||.||.|||||.|||||.||.||||||||..|.|||| || .|
BL00213___bgl 1410 CCCGCTGAAAGGCGAAGTCAAAGCATTGAGTGAAGTGGATGATGCGA-CA 1458
BSNT_06027___ 1447 TTTTCTGTCGGGA--TCATGGGAAAAGGATTTGCCATTGAGCCTGAAGAA 1494
||||||| |.|| |||||||||||||..|.||||||||||||||||||
BL00213___bgl 1459 TTTTCTG--GAGAAGTCATGGGAAAAGGCGTCGCCATTGAGCCTGAAGAA 1506
BSNT_06027___ 1495 GGAGAAGTTGTGTCGCCTGT-TCGTGGAAGCG-TTACCACCATTTTTAAA 1542
||..||||.||||||||.|| ||..|.| || |.||.|||.|||||.||
BL00213___bgl 1507 GGCAAAGTGGTGTCGCCGGTATCAGGCA--CGATCACAACCGTTTTTCAA 1554
BSNT_06027___ 1543 ACAAAACACGCAATTGGCATTACGAGTGATCAGGGAGCTGAAATACTCAT 1592
||.||.|||||..|.||||||||.||.||..|.||.||.|||||..|.||
BL00213___bgl 1555 ACGAAGCACGCCCTCGGCATTACAAGCGACAATGGGGCGGAAATTATTAT 1604
BSNT_06027___ 1593 ACACATTGGATTGGACACGGTAAAGCTGGAGGG-----ACAATGGTTCAC 1637
.||.||.|||.|.||||||||.||..||.|.|| || ||.||
BL00213___bgl 1605 CCATATCGGAATCGACACGGTGAAATTGAACGGCGAGCAC-----TTTAC 1649
BSNT_06027___ 1638 GGTTCACGTCAAAGAAGGCGACAAGGTCGCACCGGGAGATCCGCTCGTGT 1687
.||.||.|||||..||||||||...||...|||||||||...|||.||.|
BL00213___bgl 1650 CGTGCATGTCAATAAAGGCGACGCTGTAAAACCGGGAGACGAGCTTGTCT 1699
BSNT_06027___ 1688 CCTTTGATCTGGA-GCAAATCAAAGACGCGGGATATGACGTCATTACTCC 1736
|.||||||.|||| || .||.||.||.||.||.|||.|..|.||.||.||
BL00213___bgl 1700 CATTTGATATGGATGC-GATTAAGGATGCAGGCTATCAGTTGATCACGCC 1748
BSNT_06027___ 1737 GGTGATCGTGACCAACACAGACCAATATTCATTTTCGCCGGTGAAA---- 1782
|||.|||.|.||.||.||.||||..|| .|| |.||.|.|||
BL00213___bgl 1749 GGTTATCATCACAAATACGGACCGGTA-CCA-----GTCGATCAAACCTT 1792
BSNT_06027___ 1783 -GAGATCGG--TAAAGTGCAGACA--AAAGAAGCGCTGCTTGCTTTATCT 1827
||.|||.| .||||.|..|||| .|.|||||||||.|.|| .||
BL00213___bgl 1793 TGAAATCAGATGAAAGCGTTGACATTGAGGAAGCGCTGATCGC----GCT 1838
BSNT_06027___ 1828 TGA---- 1830
.|.
BL00213___bgl 1839 GGCGTAG 1845
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