Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_06047 and BL00229

See Amino acid alignment / Visit BSNT_06047 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:04
# Commandline: needle
#    -asequence dna-align/BSNT_06047___dra.1.5803.seq
#    -bsequence dna-align/BL00229___deoC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06047___dra-BL00229___deoC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06047___dra-BL00229___deoC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06047___dra
# 2: BL00229___deoC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity:     522/690 (75.7%)
# Similarity:   522/690 (75.7%)
# Gaps:          36/690 ( 5.2%)
# Score: 1978.5
# 
#
#=======================================

BSNT_06047___      1 ATGTC-ATTAGCCAACATAATTGATCATACAGCTTTGAAACCGCATACAC     49
                     |||.| ||| ||.||..|.||||||||||||||.||||||||||||||||
BL00229___deo      1 ATGACGATT-GCAAATCTCATTGATCATACAGCATTGAAACCGCATACAC     49

BSNT_06047___     50 AAAAAGCGGACATTCTAAAACTAATTGAAGAAGCGAAAACATACAAATTT     99
                     |||||.|.||.|||...|||.||||.||||||||||||.|||||.||||.
BL00229___deo     50 AAAAATCCGAGATTAAGAAATTAATAGAAGAAGCGAAAGCATACCAATTC     99

BSNT_06047___    100 GCTTCAGTATGTGTCAATCCGACATGGGTGGAGCTTGCTGCAAAAGAGCT    149
                     ||||||||.||.|||||.|||||||||||.||..||||.||..|||||||
BL00229___deo    100 GCTTCAGTCTGCGTCAACCCGACATGGGTCGAATTTGCCGCCGAAGAGCT    149

BSNT_06047___    150 TAAGGGAACTGGAGTCGACGTTTGTACGGTCATCGGCTTCCCGCTCGGTG    199
                     .||||||||.|.|.||||||||||.|||||||||||.||.|||||.||.|
BL00229___deo    150 GAAGGGAACGGAAATCGACGTTTGCACGGTCATCGGTTTTCCGCTGGGCG    199

BSNT_06047___    200 CCAATACAACTGAAACAAAAGCGTTCGAAACAAAAGACGCGATTTCAAAA    249
                     ||||.||.||.||.|||||||||||.||||||||||||||.||..|||||
BL00229___deo    200 CCAACACGACAGAGACAAAAGCGTTTGAAACAAAAGACGCTATCGCAAAA    249

BSNT_06047___    250 GGCGCCACTGAAGTGGATATGGTCATTAATATTGCCGCTTTAAAAGACAA    299
                     |||||.||.||.|||||.||||||||.||.||.|||||||||||||||  
BL00229___deo    250 GGCGCGACAGAGGTGGACATGGTCATCAACATCGCCGCTTTAAAAGAC--    297

BSNT_06047___    300 GGAAGACGATG---TGGTGGAAGCTGATATCCGCGGTGTAGTGGAAGCTG    346
                     |||| ||||||   |.||.||.||.||.|||||||..||.||.|||||.|
BL00229___deo    298 GGAA-ACGATGACTTTGTCGAGGCCGACATCCGCGCGGTCGTTGAAGCCG    346

BSNT_06047___    347 CAGCCGGAAAAGCGCTTGTCAAAGTCATTATCGAAACGTGCCTTCTGACT    396
                     ||...||.|||||||||||.||||||||.||.||||||||.||..||||.
BL00229___deo    347 CAAAAGGTAAAGCGCTTGTTAAAGTCATCATTGAAACGTGTCTGTTGACA    396

BSNT_06047___    397 GATGAAGAAAAAGAACGTGCATGCCGTTTAGCGGTGTCTGCGGGAGCGGA    446
                     ||.|||||||||||.||.||.|||||..|.||.||..||||.||.||.||
BL00229___deo    397 GACGAAGAAAAAGAGCGCGCCTGCCGCCTGGCTGTTGCTGCCGGTGCCGA    446

BSNT_06047___    447 TTTCGTAAAAACATCAACAGGCTTTTCTACAGGCGGCGCAACGAAGGAAG    496
                     .||.||.|||||.|||||.||.||.||.||.|||||.||.||...|||||
BL00229___deo    447 CTTTGTCAAAACCTCAACCGGGTTCTCAACCGGCGGAGCGACAGCGGAAG    496

BSNT_06047___    497 ATATCGCCTTAATGCGCAAAACAGTAGGACCTGATATCGGCGTGAAAGCA    546
                     ||||||||.|.|||||.|||||.||.||||||||.|||||.||.||||||
BL00229___deo    497 ATATCGCCCTGATGCGGAAAACCGTCGGACCTGACATCGGTGTCAAAGCA    546

BSNT_06047___    547 TCTGGCGGAATCAGAACGAAAGAAGATGTAGACACAATGGTTGAGGCT--    594
                     ||.||.||.||..|.||.|||||.||.||.||.||.|||.|     ||  
BL00229___deo    547 TCCGGAGGGATTCGTACAAAAGAGGACGTTGAAACCATGAT-----CTCA    591

BSNT_06047___    595 ---GGTGCAAGCCGAATTGGCGCCAGCGCAGGCGTTTCTATCGT------    635
                        ||.||.|.|||.||.||.||.||||||||||||||.|||||      
BL00229___deo    592 AACGGCGCGACCCGGATCGGTGCAAGCGCAGGCGTTTCCATCGTCAGCGG    641

BSNT_06047___    636 ---AAAAGGAGAAAATGCATCAGGCGGAGACAACTATTAA    672
                        |.|||||.|||||         |.|||.|||||.|||
BL00229___deo    642 AGCAGAAGGAAAAAAT---------GAAGATAACTACTAA    672


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.