Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06049 and BL00230
See
Amino acid alignment /
Visit
BSNT_06049 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence dna-align/BSNT_06049___deoR.1.5803.seq
# -bsequence dna-align/BL00230___deoR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06049___deoR-BL00230___deoR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06049___deoR-BL00230___deoR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06049___deoR
# 2: BL00230___deoR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 948
# Identity: 731/948 (77.1%)
# Similarity: 731/948 (77.1%)
# Gaps: 15/948 ( 1.6%)
# Score: 2792.0
#
#
#=======================================
BSNT_06049___ 1 ATGGATCGGGAAAAACAACAATTAAGCATAGAAGCGGCAAGGCTTTACTA 50
|||||...|||||||||.|||||.|||||.|||||.||.|||||.|||||
BL00230___deo 1 ATGGACAAGGAAAAACAGCAATTGAGCATTGAAGCAGCGAGGCTCTACTA 50
BSNT_06049___ 51 TCAGTCTGACTACAGTCAGCAGCAAATTGCTGAGCAGCTCAACATTTCAA 100
|||||||||||||||.|||||||||||.||.||.|||||..|.|||||||
BL00230___deo 51 TCAGTCTGACTACAGCCAGCAGCAAATCGCCGAACAGCTGCAGATTTCAA 100
BSNT_06049___ 101 GGCCAACCGTTTCCCGGCTGCTGCAATATGCAAAGGAAAAAGGGTATGTC 150
|.||.||.||.||..||||||||||.|..||.||||||||.|||||||||
BL00230___deo 101 GACCGACGGTATCAAGGCTGCTGCAGTTCGCCAAGGAAAAGGGGTATGTC 150
BSNT_06049___ 151 CAGATTCGCGTCATGGACCCTTTTGAGGATTTGGATGCGCTCGGTTCCAT 200
||.||.|||||.||||||||.|||||.|||.||||||||||||||.|.||
BL00230___deo 151 CAAATCCGCGTTATGGACCCGTTTGAAGATATGGATGCGCTCGGTGCGAT 200
BSNT_06049___ 201 ACTTGAAGAGAAATACGGGCTCCTTGAGGCGCATGTTGTGTTTTCCCCGA 250
.|||||.||.|||||||||||.||.||.|||||||||||.|||||.||||
BL00230___deo 201 GCTTGAGGAAAAATACGGGCTTCTAGAAGCGCATGTTGTCTTTTCGCCGA 250
BSNT_06049___ 251 CACCCGATTATGCAGGA--ATTACACATGACCTAAGCCGCTATGGTGCAG 298
|..|.|||||| |.|| ||.||.|||.|.||.|||||||..||.||.|
BL00230___deo 251 CCGCGGATTAT--ACGACCATCACGCATTATCTCAGCCGCTTCGGGGCCG 298
BSNT_06049___ 299 AATATATGCATGAAACGGTAAAAGACGGCGACATTGTCGGCGTCAGCTGG 348
||||||||||.|...|.||.||.|||||||||||||||||||||||||||
BL00230___deo 299 AATATATGCACGGCGCAGTCAAGGACGGCGACATTGTCGGCGTCAGCTGG 348
BSNT_06049___ 349 GGAACTACCATGTATCAAATCGCGCAAAACATGCAGCCGAAGCAAGTAAA 398
||.||.||.|||||.||||||||.|||||.||||||||.||.||.||.||
BL00230___deo 349 GGGACGACGATGTACCAAATCGCCCAAAATATGCAGCCTAAACAGGTGAA 398
BSNT_06049___ 399 AGGCGTCGAGGTCGTCCAACTGAAAGGCGGCATCAGCCATTCCCGGGTAA 448
.||||..||||||||.||||||||||||||.||||||||||||.|.||.|
BL00230___deo 399 GGGCGCAGAGGTCGTTCAACTGAAAGGCGGAATCAGCCATTCCAGCGTCA 448
BSNT_06049___ 449 GCACGTATTCGGCTGAAACGATTCAGCTGTTTGCGGAGGCTTTTCAAACG 498
.|||.||||||.||||||||||||||||||||||.||.||||||||||||
BL00230___deo 449 ACACTTATTCGTCTGAAACGATTCAGCTGTTTGCCGAAGCTTTTCAAACG 498
BSNT_06049___ 499 ATGCCGCGCTATCTCCCGCTTCCCGTCGTGTTTGATAATGCGGATGTGAA 548
||||||.|.|||.|.||||||||.|||||||||||.|||.||||.||.||
BL00230___deo 499 ATGCCGAGGTATTTGCCGCTTCCGGTCGTGTTTGACAATCCGGAAGTCAA 548
BSNT_06049___ 549 GCGAATGGTGGAGAAAGACCGTCATATTGAGCGGATCATCGAGATGGGAA 598
.|..||||||||..|.|||.|.||.||..||||||||||.||.|||||||
BL00230___deo 549 ACAGATGGTGGAACAGGACAGGCACATCAAGCGGATCATAGAAATGGGAA 598
BSNT_06049___ 599 AGCAGGCGAATATCGCTCTCTTCACGGTGGGGACCGTTCGTGACGAAGCG 648
|.|||||.||.||.||..|.||.||.||.||.||.||.||.||.|||||.
BL00230___deo 599 AACAGGCAAACATTGCGTTATTTACAGTCGGCACGGTACGCGATGAAGCC 648
BSNT_06049___ 649 CTGCTGTTCCGGCTCGGATATTTTAACGAAGAAGAGAAAGCCCTGCTGAA 698
.||||||||.||||.||.||||||.|.|||||.||.||||||||.|||||
BL00230___deo 649 TTGCTGTTCAGGCTGGGGTATTTTCATGAAGAGGAAAAAGCCCTCCTGAA 698
BSNT_06049___ 699 AAAACAGGCCGTGGGTGATATTTGTTCACGCTTTTTTGATGCGAAAGGGA 748
|.|||..|..||.||.|||||||||||.|||||||||||||||.||||.|
BL00230___deo 699 AGAACGTGGAGTCGGCGATATTTGTTCGCGCTTTTTTGATGCGGAAGGAA 748
BSNT_06049___ 749 ATATTTGCAGCAGCGCCATCAATGACCGGACCATCGGTGTTGA----GCT 794
|.|||||||||...||.|||.||...|||||.|||||..|||| |||
BL00230___deo 749 ACATTTGCAGCGATGCTATCGATTCGCGGACGATCGGCATTGAATTGGCT 798
BSNT_06049___ 795 TGAAGACCTCAGACTGAAGGAACGCTCCATTTTAGTTGCCGGCGGAAGCA 844
|||.|.||....||.|||||.||.|||.|.||.||.|||||.|||.
BL00230___deo 799 ----GACTTGAGGGAAAAAGAACGGTCGATTCTCGTAGCGGGCGGCAGCC 844
BSNT_06049___ 845 GAAAAGTATCTTCCATTCACGGAGCATTAACCGGAAAATATGCCAACGTT 894
|.|||..|.|..|.|||||.||.||..|.|..||.||.||||||||.||.
BL00230___deo 845 GGAAAAAAGCCGCTATTCATGGTGCGCTCAAAGGCAAGTATGCCAATGTG 894
BSNT_06049___ 895 TTAATCATTGACCAGCATACCGCGAGGGCGCTTGTTAATGATTTGTGA 942
.|.||.|||||.|||||.||.||||..|..||..||.|||| .|||
BL00230___deo 895 CTGATTATTGATCAGCACACGGCGAAAGAACTGCTTGATGA---CTGA 939
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.