Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06098 and BL00244

See Amino acid alignment / Visit BSNT_06098 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:06
# Commandline: needle
#    -asequence dna-align/BSNT_06098___iolC.1.5803.seq
#    -bsequence dna-align/BL00244___iolC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06098___iolC-BL00244___iolC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06098___iolC-BL00244___iolC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06098___iolC
# 2: BL00244___iolC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 982
# Identity:     767/982 (78.1%)
# Similarity:   767/982 (78.1%)
# Gaps:           8/982 ( 0.8%)
# Score: 2946.0
# 
#
#=======================================

BSNT_06098___      1 ATGAAGTATACATTCAATGAAGAGAAGGCTTTTGACATTATTGCCATCGG     50
                     |||||||||||.||.|||||||||||.|..|||||||||.|.||.|||||
BL00244___iol      1 ATGAAGTATACGTTTAATGAAGAGAAAGAATTTGACATTGTAGCGATCGG     50

BSNT_06098___     51 CCGGGCATGTATTGACCTGAACGCAGTCGAATACAACCGCCCAATGGAAG    100
                     |||.|||||.||.||..|.||||||||||||||||||.|.||.|||||..
BL00244___iol     51 CCGCGCATGCATCGATTTAAACGCAGTCGAATACAACAGGCCGATGGAGC    100

BSNT_06098___    101 AGACGATGACATTTTCCAAATACGTCGGCGGTTCACCTGCGAATATCGCG    150
                     ||||||||||||||||.|||||.||||||||.||.||.||.|||||.||.
BL00244___iol    101 AGACGATGACATTTTCAAAATATGTCGGCGGCTCCCCGGCTAATATTGCA    150

BSNT_06098___    151 ATCGGCAGCGCGAAGCTTGGCTTAAAAGCGGGCTTCATCGGCAAAATTCC    200
                     ||||||||..|.||..|.|||||.||..|.||.||.|||||.||.|||||
BL00244___iol    151 ATCGGCAGTTCCAAATTAGGCTTGAAGACCGGATTTATCGGGAAGATTCC    200

BSNT_06098___    201 GGATGACCAGCATGGAAGATTCATAGAGTCCTATATGAGAAAGACCGGCG    250
                     ||||||||||||.||.||||||||.||..|||||||||||||.||.||.|
BL00244___iol    201 GGATGACCAGCACGGCAGATTCATCGAAACCTATATGAGAAATACAGGTG    250

BSNT_06098___    251 TTGATACAACACAGATGGTTGTTGATCAAGATGGACACAAAGCAGGCCTT    300
                     |.|||||..||||.||||..||||||.||||.|||||.|||||.||.|||
BL00244___iol    251 TCGATACGTCACAAATGGCGGTTGATAAAGACGGACATAAAGCTGGGCTT    300

BSNT_06098___    301 GCATTTACAGAAATCCTCAGCCCTGAAGAATGCAGCATTTTAATGTATCG    350
                     ||.||.||||||||..|.|||||||||||||||||||||||||||||..|
BL00244___iol    301 GCTTTCACAGAAATTTTAAGCCCTGAAGAATGCAGCATTTTAATGTACAG    350

BSNT_06098___    351 CGATGATGTGGCGGATCTTTATCTTGAGCCTTCAGAGGTAAGCGAGGACT    400
                     .||||||||.||.||||||||.||||..|||||.||.||.|.|||.||||
BL00244___iol    351 GGATGATGTTGCAGATCTTTACCTTGCCCCTTCTGAAGTGAACGAAGACT    400

BSNT_06098___    401 ATATCG-CAAATGCGAAAATGCTGCTTGTTTCCGGGACAGCGCTCGCCAA    449
                     ||||.| ||||| ||||.|||||.|||||.||.||.||.|||||.||.||
BL00244___iol    401 ATATTGCCAAAT-CGAAGATGCTTCTTGTGTCAGGTACGGCGCTGGCTAA    449

BSNT_06098___    450 AAGCCCGTCACGGGAAGCGGTGCTAAAAGCTGTTCAATACGCGAAGAAGC    499
                     ||||||.||.||.|||||||||||.|||||.||.||....|||||.||||
BL00244___iol    450 AAGCCCTTCCCGCGAAGCGGTGCTGAAAGCCGTACAGCTGGCGAAAAAGC    499

BSNT_06098___    500 ATCAGGTTAAAGTGGTGTTCGAACTGGATTACCGTCCGTATACGTGG-CA    548
                     ||||.||.||||||||.||.||.||.||.||.|||||.||||||||| ||
BL00244___iol    500 ATCAAGTGAAAGTGGTCTTTGAGCTTGACTATCGTCCATATACGTGGACA    549

BSNT_06098___    549 GTCATCAGATGAAACAGCCGTTTATTATTCTTTGGTTGCCGAGCAGTCTG    598
                      ||..|.||.|||||.|||||.||.|||.|..|.||||||||.||.||.|
BL00244___iol    550 -TCTGCGGAGGAAACGGCCGTCTACTATACGCTTGTTGCCGAACAATCAG    598

BSNT_06098___    599 ATATCGTCATCGGCACACGCGATGAATTTGATGTGATGGAAAACCGCACA    648
                     |.||.||||||||.||.||.|||||.||||||||.||||||||....|..
BL00244___iol    599 ACATTGTCATCGGGACGCGTGATGAGTTTGATGTAATGGAAAATAAGAGC    648

BSNT_06098___    649 GGCGGAAGCAATGAAGAATCCGTCAATCATTTATTTGGCCATTCAGCCGA    698
                     |||||.||||||||||||||.||..|.||||||||||..|||||.||.||
BL00244___iol    649 GGCGGCAGCAATGAAGAATCTGTTCAGCATTTATTTGCACATTCCGCAGA    698

BSNT_06098___    699 CCTCGTTGTCATCAAACACGGCGTCGAAGGCTCTTACGCATACAGCAAAT    748
                     .||.||.||.|||||.|||||.||||||||.||.||.|||||||||||||
BL00244___iol    699 TCTTGTCGTTATCAAGCACGGTGTCGAAGGTTCATATGCATACAGCAAAT    748

BSNT_06098___    749 CCGGCGAGGTATTCCGCGCTCAAGCGTACAAGACAAAAGTGCTGAAAACC    798
                     ||||.||.||.|||||.||..||||||||||.||.||.||..|||||||.
BL00244___iol    749 CCGGGGACGTCTTCCGGGCGAAAGCGTACAAAACGAAGGTCTTGAAAACG    798

BSNT_06098___    799 TTTGGAGCCGGTGACTCCTATGCGTCAGCCTTTATCTATGGCCT--TGTC    846
                     ||||||||.||.||.||.||.||.||.|||||..||||.||.||  |.||
BL00244___iol    799 TTTGGAGCGGGCGATTCATACGCCTCCGCCTTCCTCTACGGACTCGTTTC    848

BSNT_06098___    847 AGCGGAAAAGACATTGAAACGGCATTGAAATACGGCAGTGCTTCCGCTTC    896
                     |  ||.|||||.||||||||.||..||||||||||.||.||||||||.||
BL00244___iol    849 A--GGCAAAGATATTGAAACCGCGCTGAAATACGGAAGCGCTTCCGCCTC    896

BSNT_06098___    897 CATTGTGGTGAGTAAGCATAGTTCGTCAGAAGCGATGCCGACTGCGGAAG    946
                     .|||||.||....|||||.||.||.||.||||||||||||||.|..|..|
BL00244___iol    897 GATTGTTGTTTCAAAGCACAGCTCATCTGAAGCGATGCCGACAGTCGCCG    946

BSNT_06098___    947 AAATCGTACAGCTTATTGAAGCACAGTCATAA    978
                     |.||.|.|.|||||||||..||.|||||.|||
BL00244___iol    947 AGATTGAAGAGCTTATTGCGGCTCAGTCTTAA    978


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