Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04151 and BL00301
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_04151___yslB.1.5803.seq
# -bsequence dna-align/BL00301___yslB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04151___yslB-BL00301___yslB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04151___yslB-BL00301___yslB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04151___yslB
# 2: BL00301___yslB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity: 335/456 (73.5%)
# Similarity: 335/456 (73.5%)
# Gaps: 21/456 ( 4.6%)
# Score: 1236.0
#
#
#=======================================
BSNT_04151___ 1 ATGAAGTCTAAATTTGAAGCATCTATTGACAAC---------CTAAAAGA 41
||||| |||||.||||||| ||| .|||||||
BL00301___ysl 1 ATGAA---TAAATATGAAGCA---------AACTTAGCGCAATTAAAAGA 38
BSNT_04151___ 42 AATTGAAATGAACGCCTATGCCTATGAACTAATACGAGAGATCGTTCTCC 91
..|.|||.|...|||.||||.||||||..|.||..|.||..|..|.||.|
BL00301___ysl 39 GCTGGAAGTCTCCGCATATGGCTATGAGTTGATCAGGGAAGTGCTGCTTC 88
BSNT_04151___ 92 CAGATATGCTTGGCCAAGATTACTCTTCCATGATGTATTGGGCAGGAAAA 141
|.||||||||.||.|||||.|||.|....||||||||.|||||.||||||
BL00301___ysl 89 CCGATATGCTGGGACAAGACTACGCAGATATGATGTACTGGGCGGGAAAA 138
BSNT_04151___ 142 CATCTCGCCCGTAAGTTTCCTCTTGAATCATGGGAGGAATTTCCGGCCTT 191
.|.||||||||.|||||.||.||||||||..|||||||..||||.||.||
BL00301___ysl 139 AAGCTCGCCCGCAAGTTCCCGCTTGAATCCCGGGAGGATCTTCCCGCTTT 188
BSNT_04151___ 192 CTTTGAAGAAGCGGGCTGGGGAACCCTCACCAACGTAAGCGCTAAAAAAC 241
||||.|.||.||.|||||||||||.||..|.|.|||.....|.|||||||
BL00301___ysl 189 CTTTCAGGATGCAGGCTGGGGAACGCTTGCGATCGTCCATTCAAAAAAAC 238
BSNT_04151___ 242 AGGAGCTTGAATTTGAACTTGAAGGGCCGATCATTTCCAACCGGCTTAAA 291
||||||||||.||||||||.|||||.|||.|..||||.|||||.||.||.
BL00301___ysl 239 AGGAGCTTGAGTTTGAACTCGAAGGCCCGCTGGTTTCAAACCGCCTCAAG 288
BSNT_04151___ 292 CATCAGAAAGAACCTTGCTTTCAGCTGGAGGCTGGTTTTATCGCTGAACA 341
.||||.||.||.||.|||||||||||.||.||.||.||||||||.||.||
BL00301___ysl 289 TATCAAAAGGAGCCCTGCTTTCAGCTTGAAGCCGGGTTTATCGCCGAGCA 338
BSNT_04151___ 342 AATTCAATTAATGAATGATCAGATTGCCGAATCATATGAACAAGTAAAAA 391
|||.||..|.|||||.||.||.|||||||||||.||||||||.||.||||
BL00301___ysl 339 AATCCAGCTGATGAACGAACAAATTGCCGAATCTTATGAACAGGTGAAAA 388
BSNT_04151___ 392 AGAGAGCCGATAAAGTGGTTCTAACTGTGAAATGGGATATGAAAGACCCA 441
|.|||||||..|||||||||.||||.||||||||||||.||||||||||.
BL00301___ysl 389 AAAGAGCCGGAAAAGTGGTTTTAACGGTGAAATGGGATTTGAAAGACCCG 438
BSNT_04151___ 442 GTGTAA 447
|..|||
BL00301___ysl 439 GCATAA 444
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