Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04150 and BL00323
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_04150___sdhC.1.5803.seq
# -bsequence dna-align/BL00323___sdhC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04150___sdhC-BL00323___sdhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04150___sdhC-BL00323___sdhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04150___sdhC
# 2: BL00323___sdhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 614
# Identity: 480/614 (78.2%)
# Similarity: 480/614 (78.2%)
# Gaps: 10/614 ( 1.6%)
# Score: 1851.5
#
#
#=======================================
BSNT_04150___ 1 ATGTCTGGGAACAGAGAGTTTTATTTTCGAAGATTGCATTCCTTGCTTGG 50
|||.|.|||||||||||||||..||.|||||||.|||||||.||||||||
BL00323___sdh 1 ATGGCCGGGAACAGAGAGTTTGTTTATCGAAGACTGCATTCTTTGCTTGG 50
BSNT_04150___ 51 CGTCATACCGGTCGGCATCTTTCTCATTCAGCATTTAGTCGTCAACCAGT 100
||||||||||||.|||||.|||.|.||.||||||||.||.||||||||.|
BL00323___sdh 51 CGTCATACCGGTGGGCATATTTTTAATCCAGCATTTGGTTGTCAACCATT 100
BSNT_04150___ 101 TTGCCGCAAGGGGCGCTGAAGCATTCAATAGCGCTGCTCATTTTATGGAT 150
||||.|||||.||.|..||.||.||.||||.|||.|||||.||||||||.
BL00323___sdh 101 TTGCGGCAAGCGGAGAAGAGGCGTTTAATAACGCCGCTCACTTTATGGAA 150
BSNT_04150___ 151 AGTCTGCCTTTCAGGTATGCCTTGGAAATTTTTATTATCTTCTTACCATT 200
|..|||||.||||||||.||.||||||||.||..|.||.|||.|.||..|
BL00323___sdh 151 AACCTGCCGTTCAGGTACGCTTTGGAAATCTTCGTGATTTTCCTTCCGCT 200
BSNT_04150___ 201 AATTTATCATGCAGTTTATGGTGTGTACATAGCGTTTACTGCGAAAAATA 250
.|||||||||||.||||||||.||.||||||||.|||||.||||||||.|
BL00323___sdh 201 GATTTATCATGCTGTTTATGGAGTATACATAGCTTTTACAGCGAAAAACA 250
BSNT_04150___ 251 ACGCAGGCCA-ATACAGCTACATGAGAAACTGGCTATTCGTCCTGCAGCG 299
|.|| |..|| ||.|.|||...|.|||||||||.|.|||||.||||||||
BL00323___sdh 251 ATGC-GAACAGATTCGGCTTTTTTAGAAACTGGATGTTCGTTCTGCAGCG 299
BSNT_04150___ 300 TGTAACCGGTATCATCACCCTCATTTTCGTCAGCTGGCACGTGTGGGAAA 349
..|.||.||.|||||.|||.|.|||||.||||||||||||||||||||||
BL00323___sdh 300 GATTACAGGAATCATTACCTTGATTTTTGTCAGCTGGCACGTGTGGGAAA 349
BSNT_04150___ 350 CCCGCATTGCTGCACAAATGGGCGCTGAGGTCAATTTCGACATGATGGCG 399
|.||.|||||.||.||||||||.||.|||||.||.||.|||||||||||.
BL00323___sdh 350 CACGGATTGCCGCCCAAATGGGGGCAGAGGTGAACTTTGACATGATGGCT 399
BSNT_04150___ 400 AATATTTTGAGCTCTCCGGCTATGCTTGGTTTTTACATTGTCGGTGTTTT 449
.|||||||||||||.|||...|||||.||.|||||||||||.|||||..|
BL00323___sdh 400 GATATTTTGAGCTCCCCGATCATGCTCGGCTTTTACATTGTAGGTGTCCT 449
BSNT_04150___ 450 ATCAACAATTTTCCACTTCTCGAACGGTTTATGGTCTTTCGCTGTTACAT 499
.||||||||.||||||||.||.||||||||||||||.||.|||||.||.|
BL00323___sdh 450 CTCAACAATCTTCCACTTTTCAAACGGTTTATGGTCGTTTGCTGTCACTT 499
BSNT_04150___ 500 GGGGCATCACGGTAACGCCTCGTTCTCAAAGAATTTCGACATACGTT--- 546
||||.|||||.||..|.|||||.||.||..||| |||.| |||||
BL00323___sdh 500 GGGGAATCACTGTTTCTCCTCGCTCACAGCGAA--TCGCC--ACGTTTGT 545
BSNT_04150___ 547 -ACGCTGATTATTTTTGTTGCACTGTCATACGTAGGCTTAAAAGCGATTT 595
||..||....|.|||||||..|||||.||.|||||..|.|.||||||||
BL00323___sdh 546 GACAATGGGAGTCTTTGTTGTGCTGTCCTATGTAGGGCTGAGAGCGATTT 595
BSNT_04150___ 596 TCGCATTTGTTTAA 609
|.||||||||.|||
BL00323___sdh 596 TGGCATTTGTGTAA 609
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