Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04158 and BL00326
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_04158___trxA.1.5803.seq
# -bsequence dna-align/BL00326___trxA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04158___trxA-BL00326___trxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04158___trxA-BL00326___trxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04158___trxA
# 2: BL00326___trxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity: 281/315 (89.2%)
# Similarity: 281/315 (89.2%)
# Gaps: 0/315 ( 0.0%)
# Score: 1269.0
#
#
#=======================================
BSNT_04158___ 1 ATGGCTATCGTAAAAGCAACTGATCAATCTTTCTCAGCTGAAACAAGCGA 50
|||||||||||||||||||||||||||.|.||||||.|||||||||||||
BL00326___trx 1 ATGGCTATCGTAAAAGCAACTGATCAAACATTCTCATCTGAAACAAGCGA 50
BSNT_04158___ 51 AGGCGTCGTACTGGCAGACTTCTGGGCTCCTTGGTGCGGACCTTGTAAAA 100
||||||.||.||.||.|||||.||||||||||||||||||||||||||||
BL00326___trx 51 AGGCGTAGTTCTTGCCGACTTTTGGGCTCCTTGGTGCGGACCTTGTAAAA 100
BSNT_04158___ 101 TGATTGCACCTGTTCTTGAAGAATTGGATCAAGAAATGGGAGACAAACTG 150
||||.||.||.||.||||||||..|.||||||||||||||||||||||||
BL00326___trx 101 TGATCGCGCCGGTACTTGAAGAGCTTGATCAAGAAATGGGAGACAAACTG 150
BSNT_04158___ 151 AAAATCGTAAAAATCGATGTAGACGAAAACCAAGAAACTGCCGGAAAATA 200
||||||||||||||||||||.|||||||||||||||||||||||.|||||
BL00326___trx 151 AAAATCGTAAAAATCGATGTTGACGAAAACCAAGAAACTGCCGGCAAATA 200
BSNT_04158___ 201 CGGCGTTATGAGCATCCCGACTCTTCTTGTGTTAAAAGACGGCGAAGTAG 250
||||||.|||||||||||||||||.||.||..||||||||||||||||.|
BL00326___trx 201 CGGCGTGATGAGCATCCCGACTCTCCTCGTACTAAAAGACGGCGAAGTGG 250
BSNT_04158___ 251 TTGAAACTTCAGTCGGCTTCAAACCAAAAGAAGCGCTTCAAGAGCTTGTA 300
|.|||||.||.||||||||.|||||.||||||||||||.||||.||.||.
BL00326___trx 251 TCGAAACATCTGTCGGCTTTAAACCGAAAGAAGCGCTTGAAGAACTGGTC 300
BSNT_04158___ 301 AACAAACATCTTTAA 315
|||||||||.|.|||
BL00326___trx 301 AACAAACATTTGTAA 315
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