Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04164 and BL00328

See Amino acid alignment / Visit BSNT_04164 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:13
# Commandline: needle
#    -asequence dna-align/BSNT_04164___etfB.1.5803.seq
#    -bsequence dna-align/BL00328___etfB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04164___etfB-BL00328___etfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04164___etfB-BL00328___etfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04164___etfB
# 2: BL00328___etfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 792
# Identity:     579/792 (73.1%)
# Similarity:   579/792 (73.1%)
# Gaps:          36/792 ( 4.5%)
# Score: 2055.0
# 
#
#=======================================

BSNT_04164___      1 ATGAATCTATTTGTACTGATGAAACGGACGTTTGACACAGAAGAAAAAAT     50
                     |||||..|.|.|||..|.|||||.||.||||||||.|||||.||.|||||
BL00328___etf      1 ATGAACATTTATGTCTTAATGAAGCGCACGTTTGATACAGAGGAGAAAAT     50

BSNT_04164___     51 CGTCATTGA---AACA---GGAAAGATTCAGGA-TGACGGAGCGGAATGG     93
                       |||  ||   ||||   |||||   |||..| .|||||||||||||..
BL00328___etf     51 --TCA--GATCGAACAAGGGGAAA---TCAACACGGACGGAGCGGAATTC     93

BSNT_04164___     94 ATCATTAATCCATATGATGAGTACGCGATAGAAGAAGCCATCCAGCTGAA    143
                     |||||.|||||.||.|||||||||||.||.||||||||..|||||.||||
BL00328___etf     94 ATCATCAATCCGTACGATGAGTACGCCATTGAAGAAGCGCTCCAGTTGAA    143

BSNT_04164___    144 GGAAAAGCATGGCGGCACGATCACCGCCGTCACGGTCGGCGGTGAAGAAG    193
                     .||.|||||.|||||....||.||.|.|||.||.|||||||..|||||||
BL00328___etf    144 AGAGAAGCACGGCGGTGAAATTACGGTCGTGACAGTCGGCGAGGAAGAAG    193

BSNT_04164___    194 CGGAGAAAGAATTGCGTACGGCGCTTGCCATGGGTTGTGACCAAGCTGTT    243
                     |.||.||||||.|..|.|||||.||.||.|||||.||.|||.||||.|||
BL00328___etf    194 CTGAAAAAGAACTCAGGACGGCTCTGGCGATGGGGTGCGACAAAGCCGTT    243

BSNT_04164___    244 TTAATCAACATAGAAGATGATCTTGAAGAACCCGACCAATATTCCATTTC    293
                     .|.||||||||.|||||.||..|.||||||.|.|||||||||.|...|||
BL00328___etf    244 CTGATCAACATTGAAGACGACGTGGAAGAAGCGGACCAATATACGGCTTC    293

BSNT_04164___    294 TCAAG---TTTTATACCACTATATGAAGGATCAGGAGTTTGATTTGATTC    340
                        ||   |..|.|||.|||||.||||.||.|..||||..||..|.||.|
BL00328___etf    294 ---AGCCATCCTTTACAACTATTTGAAAGACCGCGAGTACGACATTATAC    340

BSNT_04164___    341 TCGGCGGAAATGTTGCCATTGACGGAGGATCAGGACAAGTGGCGCCTCGG    390
                     |||||||.|||||.||.||.|||||.|||||.|||||.||.||||||||.
BL00328___etf    341 TCGGCGGGAATGTGGCGATCGACGGGGGATCGGGACAGGTTGCGCCTCGT    390

BSNT_04164___    391 CTTGCCGAGCTACTGGACATTCCGTGTATCACTACGATCACCAAACT--C    438
                     .|.|||||.||.||||.||||||.|||||.||.|||||.||.||.||  |
BL00328___etf    391 TTGGCCGAACTGCTGGGCATTCCTTGTATTACGACGATTACAAAGCTGAC    440

BSNT_04164___    439 GAAATCAACGGCACTGATGCAGAAGCAGAAAGGGACGTCGAAGGGGATGT    488
                     |  .|.||||||...||||..|||||.|||.|.||||.|||.||.|||.|
BL00328___etf    441 G--GTAAACGGCGGAGATGTTGAAGCGGAACGCGACGCCGAGGGCGATCT    488

BSNT_04164___    489 TGAAAAAATCAAAACGACGCTCCCATTGCTTGTCACAGCTCAGCAGGGCT    538
                     ||||...|||.||||..||||.|||.|..|.|..||.||.||||||||.|
BL00328___etf    489 TGAAGTGATCCAAACATCGCTTCCAATCGTAGCGACTGCACAGCAGGGGT    538

BSNT_04164___    539 TAAACGAGCCGCGCTATCCATCGCTTCCGGGAATTATGAAGGCTAAGAAA    588
                     |.|||||||||||.|||||.||.|||||||||||.||||||||.||||||
BL00328___etf    539 TGAACGAGCCGCGTTATCCGTCTCTTCCGGGAATCATGAAGGCAAAGAAA    588

BSNT_04164___    589 AAGCCGCTTGAAGAGCTTGAACTTGATGATCTTGACCTGGACGAAGA---    635
                     |||||.||.||.||||||||.|||||||||||.|||.|.||||||||   
BL00328___etf    589 AAGCCTCTCGAGGAGCTTGAGCTTGATGATCTCGACATCGACGAAGAAGA    638

BSNT_04164___    636 ---GGATGCTGAACCAAAGCTGAAAACCATTGAACGTTTTCTGCCGCCGA    682
                        ||.|||..||.||      |||||.||.|||||.||.|||||.||||
BL00328___etf    639 CGTGGCTGCGAAAACA------AAAACGATCGAACGGTTCCTGCCTCCGA    682

BSNT_04164___    683 AAAAAGAAGCCGGGAAGCTTCTCCAAGGTGAGCCTGCTGAACAGGCAAAA    732
                     ||||||||||||||||..|.||..||||.|||||.|...|.|||||...|
BL00328___etf    683 AAAAAGAAGCCGGGAAAATCCTTGAAGGGGAGCCGGAGCAGCAGGCGGCA    732

BSNT_04164___    733 GAGCTTGTTTCATTGCTCCGCAGCGAAGCTAAAGTCATTTAA    774
                     ||.|||||.|||.||||..|.||||||||.||.|||.|.|.|
BL00328___etf    733 GAACTTGTATCACTGCTGAGAAGCGAAGCAAAGGTCGTATGA    774


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