Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04275 and BL00366
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:24
# Commandline: needle
# -asequence dna-align/BSNT_04275___ytpI.1.5803.seq
# -bsequence dna-align/BL00366___ytpI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04275___ytpI-BL00366___ytpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04275___ytpI-BL00366___ytpI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04275___ytpI
# 2: BL00366___ytpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 341
# Identity: 201/341 (58.9%)
# Similarity: 201/341 (58.9%)
# Gaps: 76/341 (22.3%)
# Score: 521.0
#
#
#=======================================
BSNT_04275___ 1 ATGCTGGTTCTTGTTTTTTTGATTGGGCTTTCCGCCTGCT--TTTATGTG 48
||||.|.||.||||||||||.||||.|.||||.|| |.| .|||||||
BL00366___ytp 1 ATGCCGTTTTTTGTTTTTTTTATTGTGGTTTCAGC--GATAGCTTATGTG 48
BSNT_04275___ 49 TACTATAAAGTAAAAGGCGTACGGGC--------AAAGCCATCTTTGGCA 90
||||..||||||| .|||.|.|| ||||| ..||| |
BL00366___ytp 49 TACTTCAAAGTAA----GGTATGTGCGCACCAAAAAAGC---GGTTG--A 89
BSNT_04275___ 91 AAAGAAATA-TGTTCAGCAAAATCAAGCAT-------GGCCTTAGGGTCA 132
|..|.|||| |.|||.||.||.|||||||| ||||| ||
BL00366___ytp 90 ACGGGAATACTATTCGGCCAAGTCAAGCATGAGTCTGGGCCT----GT-- 133
BSNT_04275___ 133 CTAGTCCTGTTCTACGG-GCTCAACCAAATGATATTATTCCATTCAGTAT 181
|..||.||||||.||| || |||.||..||||.|||..|| .|.|
BL00366___ytp 134 -TTATCATGTTCTTCGGCGC-CAATCAGCTGATTTTAAACC--GCGG--- 176
BSNT_04275___ 182 TAACG------TTAGTAATCGGCGGTATCTTTA------------TCGTC 213
.||| .|.||.|||||||.|||.|||| |||
BL00366___ytp 177 -CACGCTGGCTGTCGTCATCGGCGTTATTTTTATGCTGACCGGGCTCG-- 223
BSNT_04275___ 214 ATAGGAGCAGGAAGCGCTTGGGCAGGTTATAAAGCCTTCAGGCATTACAA 263
||||||.| |||||.||.||.||.||||..|.|||.|| ..
BL00366___ytp 224 ---GGAGCATG-------TGGGCCGGCTACAAGGCCTATAAGCACTA-TG 262
BSNT_04275___ 264 TCCCCTT-CACGCCAAAGAAGCTGAAAGAGATCACGCGTAA 303
||||.|| |..||.||||||...|||.|.||..||||.|||
BL00366___ytp 263 TCCCTTTGCTTGCGAAAGAAAACGAACGGGAGAACGCATAA 303
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