Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04224 and BL00382
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:19
# Commandline: needle
# -asequence dna-align/BSNT_04224___thrS.1.5803.seq
# -bsequence dna-align/BL00382___thrS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04224___thrS-BL00382___thrS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04224___thrS-BL00382___thrS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04224___thrS
# 2: BL00382___thrS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1942
# Identity: 1605/1942 (82.6%)
# Similarity: 1605/1942 (82.6%)
# Gaps: 20/1942 ( 1.0%)
# Score: 6661.5
#
#
#=======================================
BSNT_04224___ 1 ATGTCAGATATGGTAAAAATCACATTTCCTGATGGAGCAGTCAAGGAGTT 50
||||||||||||||||||||||.|||||||||.|||||.||.||||||||
BL00382___thr 1 ATGTCAGATATGGTAAAAATCAAATTTCCTGACGGAGCGGTTAAGGAGTT 50
BSNT_04224___ 51 TGCGAAAGGAACAACAACAGAAGATATCGCGGCATCCATCAGTCCGGGAT 100
|||.||||..||.|||||||||||||||||||||||.||||||||.||.|
BL00382___thr 51 TGCAAAAGCGACGACAACAGAAGATATCGCGGCATCAATCAGTCCCGGCT 100
BSNT_04224___ 101 TAAAGAAAAAATCATTAGCCGGAAAACTGAACGGAAAAGAAATCGATTTG 150
|||||||||||.|..||||.||.|||.|.|||||.||||||||||||.||
BL00382___thr 101 TAAAGAAAAAAGCGATAGCGGGGAAATTAAACGGCAAAGAAATCGATCTG 150
BSNT_04224___ 151 AGAACGCCGATCAATGAAGACGGTACAGTGGAAATCATTACAGAAGGCTC 200
.|..|.||||||..|||.|||||..|..|.||||||||||||||||||..
BL00382___thr 151 CGCGCACCGATCCTTGAGGACGGCGCCATCGAAATCATTACAGAAGGCAG 200
BSNT_04224___ 201 AGAAGAAGGTCTTCAAATTATGCGCCACAGTACGGCTCACTTGCTGGCTC 250
.|||||||..|||.||||.||||||||||||||.||.|||||..||||.|
BL00382___thr 201 CGAAGAAGCGCTTGAAATCATGCGCCACAGTACTGCACACTTAATGGCCC 250
BSNT_04224___ 251 AAGCGATTAAACGCATCTACAAGGATGTTAAATTCGGCGTCGGTCCGGTT 300
|.|||||.||.|||.|.||.||..|.||.||..||||.|||||.||||||
BL00382___thr 251 AGGCGATCAAGCGCCTGTATAAAAACGTGAAGCTCGGGGTCGGCCCGGTT 300
BSNT_04224___ 301 ATCGAAAACGGTTTTTACTACGATGTAGAAATGGACGAAGCGATTACACC 350
|||||||||||.||.||||||||.||.||..||||.||||||.|.||.||
BL00382___thr 301 ATCGAAAACGGCTTCTACTACGACGTGGATTTGGAAGAAGCGCTGACTCC 350
BSNT_04224___ 351 GGAGGATCTGCCGAAAATCGAGAAAGAAATGAAAAAAATCGTTAATGCG- 399
|||.||.||.|||||.||.|||||.||||||||||||||||| ||
BL00382___thr 351 GGAAGACCTTCCGAAGATTGAGAAGGAAATGAAAAAAATCGT-----CGG 395
BSNT_04224___ 400 ----AACCTGCCGATCGTTCGAAAAGAAGTCAGCCGTGAAGAAGCGAAAG 445
||.|||||||||||..||||||||||||||||.||.|||||.|.||
BL00382___thr 396 GGAAAATCTGCCGATCGTAAGAAAAGAAGTCAGCCGAGAGGAAGCCAGAG 445
BSNT_04224___ 446 CCCGTTTTGCGGAAATCGGCGACGACCTGAAGCTTGAACTATTGGATGCG 495
|||..|||||.|||||||||||.||.|||||..|.|||||..|.||||||
BL00382___thr 446 CCCTGTTTGCCGAAATCGGCGATGATCTGAAATTGGAACTGCTTGATGCG 495
BSNT_04224___ 496 ATTCCTGAAGGAGAAACCGTTTCGATCTATGAGCAAGGCGAATTCTTTGA 545
|||||.|||||.||.||.||.||||||||||||||.|||||||||||.||
BL00382___thr 496 ATTCCGGAAGGCGAGACGGTATCGATCTATGAGCAGGGCGAATTCTTCGA 545
BSNT_04224___ 546 CCTGTGCCGCGGTGTCCATGTTCCTTCAACCGGAAAAATCAAAGAGTTTA 595
.||||||||||||||.||.||||||||.||.||.||||||||.|||||.|
BL00382___thr 546 TCTGTGCCGCGGTGTTCACGTTCCTTCGACGGGCAAAATCAAGGAGTTCA 595
BSNT_04224___ 596 AGCTGTTAAGCCTTGCAGGCGCATACTGGCGCGGCGACAGCAAAAACCAA 645
|||||.|.||||||||.||.||||||||||||||.||||||||.|||.|.
BL00382___thr 596 AGCTGCTGAGCCTTGCGGGGGCATACTGGCGCGGAGACAGCAACAACAAG 645
BSNT_04224___ 646 ATGCTTCAGCGCGTATATGGTACAGCTTTCTTCAAAAAAGCTGATCTTGA 695
|||||.||||||.|.|||||.||.|||||||||||||||||.||.|||||
BL00382___thr 646 ATGCTCCAGCGCATCTATGGGACGGCTTTCTTCAAAAAAGCCGAGCTTGA 695
BSNT_04224___ 696 AGAGCATCTTCGTATGCTAGAAGAAGCGAAAGAACGCGACCACAGAAAGC 745
||||||||||||..|.||.||.||||||||||||||||||||||||||.|
BL00382___thr 696 AGAGCATCTTCGCCTCCTTGAGGAAGCGAAAGAACGCGACCACAGAAAAC 745
BSNT_04224___ 746 TCGGCAAAGAATTAAAGCTGTTTGCGAACTCTCAAAAAGTCGGACAAGGC 795
||||.||||||.|.||||||||.||.||.||.|||||||||||.||.||.
BL00382___thr 746 TCGGAAAAGAACTGAAGCTGTTCGCCAATTCGCAAAAAGTCGGCCAGGGT 795
BSNT_04224___ 796 CTGCCGCTTTGGCTGCCAAAAGGCGCGACAATCCGCCGCGTCATCGAGCG 845
||||||||||||||||||||.||.|||||.|||.|.||||||||||||||
BL00382___thr 796 CTGCCGCTTTGGCTGCCAAAGGGTGCGACCATCAGACGCGTCATCGAGCG 845
BSNT_04224___ 846 CTACATTGTCGATAAAGAAATCAGC-CTCGGCTATGAGCACGTATACACA 894
|||.||.||.||.|||||..|| || |||||||||||||||||.|||||.
BL00382___thr 846 CTATATCGTTGACAAAGAGCTC-GCGCTCGGCTATGAGCACGTGTACACC 894
BSNT_04224___ 895 CCTGTGCTAGGCAGCAAAGAGCTGTATGAAACATCAGGACACTGGGACCA 944
|||||.||.|||||||||||.|||||||||||||||||.||||||||.||
BL00382___thr 895 CCTGTCCTCGGCAGCAAAGACCTGTATGAAACATCAGGCCACTGGGATCA 944
BSNT_04224___ 945 TTATCAGGAAGGCATGTTCCCTCCGATGGAAATGGACAATGAAACACTTG 994
||||||.||.|||||||||||.||||||||.|||||||||||||||||||
BL00382___thr 945 TTATCAAGACGGCATGTTCCCGCCGATGGAGATGGACAATGAAACACTTG 994
BSNT_04224___ 995 TATTGCGTCCGATGAACTGTCCGCACCATATGATGATTTACAAACAAGAC 1044
|..|.|||||||||||||||||||||||||||||||||||.|||.|.|||
BL00382___thr 995 TGCTTCGTCCGATGAACTGTCCGCACCATATGATGATTTATAAAAACGAC 1044
BSNT_04224___ 1045 ATTCACAGTTACCGCGAGCTTCCGATTCGTATTGCGGAGCTTGGAACGAT 1094
||||||||.|||||.|||||||||||.||.||.||.|||||.||||||||
BL00382___thr 1045 ATTCACAGCTACCGTGAGCTTCCGATCCGGATCGCCGAGCTCGGAACGAT 1094
BSNT_04224___ 1095 GCACCGCTATGAAATGTCAGGTGCGCTGTCAGGGCTTCAACGGGTACGCG 1144
|||||||||||||||||||||.||.||.||||||||.||.||.||.||||
BL00382___thr 1095 GCACCGCTATGAAATGTCAGGGGCTCTTTCAGGGCTGCAGCGCGTCCGCG 1144
BSNT_04224___ 1145 GAATGACGTTAAATGATGCACACATCTTTGTGCGCCCGGATCAAATTAAG 1194
||||||||.|.|||||.||.|||||.||.||.||.||.||||||||.||.
BL00382___thr 1145 GAATGACGCTGAATGACGCCCACATTTTCGTCCGTCCAGATCAAATCAAA 1194
BSNT_04224___ 1195 GATGAGTTTATCCGTACAGTCCGTTTAATCCAGGATGTTTATGAAGACTT 1244
||.|||||.||.||.||.|||||..|.||.||||||||.||.||||||||
BL00382___thr 1195 GACGAGTTCATTCGAACTGTCCGCCTGATTCAGGATGTATACGAAGACTT 1244
BSNT_04224___ 1245 CGG--TTTAAGTG-ATTACACATTCCGTCTGTCTTACCGCGATCCGGAAG 1291
||| |..|||.| ||| |||||||..|||||||||||||.||.||||
BL00382___thr 1245 CGGACTGGAAGAGTATT---CATTCCGCTTGTCTTACCGCGACCCTGAAG 1291
BSNT_04224___ 1292 ATACAGAGAAATATTTTGATGACGATGAAATGTGGAACAAAGCGCAATCC 1341
|||||||||||||.|..||||||||||||||||||||||||||||||||.
BL00382___thr 1292 ATACAGAGAAATACTACGATGACGATGAAATGTGGAACAAAGCGCAATCG 1341
BSNT_04224___ 1342 ATGCTGAAAGAGGCAATGGACGAAATCGGCCACGACTATTACGAAGCAGA 1391
||||||||.|||||.||||||||.||||||||.||.|||||||||||.||
BL00382___thr 1342 ATGCTGAAGGAGGCGATGGACGAGATCGGCCATGATTATTACGAAGCTGA 1391
BSNT_04224___ 1392 AGGTGAAGCGGCATTCTACGGCCCTAAACTTGATGTCCAAGTGAAAACTG 1441
|||.||||||||.||||||||.||.||.|||||.||.||.||.|||||.|
BL00382___thr 1392 AGGGGAAGCGGCCTTCTACGGACCGAAGCTTGACGTTCAGGTCAAAACAG 1441
BSNT_04224___ 1442 CGATCGGAAAAGAAGAAACACTGTCTACGGTACAGCTTGA-TTTCTTATT 1490
|.|||||.|||||.|||||.|||||.||.||.|||||.|| ||.|||.||
BL00382___thr 1442 CAATCGGCAAAGAGGAAACTCTGTCAACTGTTCAGCTGGACTTCCTTCTT 1491
BSNT_04224___ 1491 GCCGGAACGTTTCGACCTGACATACATCGGTGAGGACGGCAAGCAGCACC 1540
||.|||...|||||.||||||||..||||.||.|||||.||.|..||.|
BL00382___thr 1492 -CCTGAAAAATTCGATCTGACATATGTCGGGGAAGACGGAAAACCTCATC 1540
BSNT_04224___ 1541 GTCCGGTTGTCATTCACAGAGGTGTCGTTTCAACAATGGAACGCTTTGTT 1590
|||||||.||||||||||||||||||||.||.|||||||||||||||||.
BL00382___thr 1541 GTCCGGTCGTCATTCACAGAGGTGTCGTATCGACAATGGAACGCTTTGTC 1590
BSNT_04224___ 1591 GCCTTCTTAATCGAAGAACACAAAGGCGCGCTGCCGACATGGCTTGCACC 1640
||.||||||||.||.||.||.||||||||..||||||||||||||||.||
BL00382___thr 1591 GCTTTCTTAATTGAGGAGCATAAAGGCGCATTGCCGACATGGCTTGCCCC 1640
BSNT_04224___ 1641 GGTTCAGTTCCAAGTCATTCCGGTTTCTCCGGCTGTGCATTTAGACTACG 1690
.|||||||||||.|||||.||.||.||.|||.||||||||.|.|||||||
BL00382___thr 1641 TGTTCAGTTCCAGGTCATCCCTGTATCGCCGTCTGTGCATCTTGACTACG 1690
BSNT_04224___ 1691 CGAAAAAAGTGCAGGAACGCCTGCAGCGTGAAGGCCTGCGTGTTGAAGTC 1740
|.||||||||.||.||.|||||||||||||||||.||.||.|||||||||
BL00382___thr 1691 CCAAAAAAGTTCAAGAGCGCCTGCAGCGTGAAGGGCTTCGCGTTGAAGTC 1740
BSNT_04224___ 1741 GACAGCCGCGATGAAAAAATCGGCTACAAAATCCGTGAAGCGCAAATGCA 1790
||.|.||||||.||.|||||||||||.|||||||||||||||||.|||||
BL00382___thr 1741 GATACCCGCGACGAGAAAATCGGCTATAAAATCCGTGAAGCGCAGATGCA 1790
BSNT_04224___ 1791 AAAAATCCCGTACATGCTGGTGGTCGGTGACCAAGAAGCAGAAAACGGCG 1840
|||||||||.||||||||.||.|||||.|||||.||||..|||||||..|
BL00382___thr 1791 AAAAATCCCTTACATGCTTGTCGTCGGCGACCAGGAAGTTGAAAACGAAG 1840
BSNT_04224___ 1841 CGGTAAACGTGCGTAAATACGGAGAGCAGAACTCTGAAACGATTTCTCTT 1890
|.||.|||||.||.||||||||||||||.||.||.||||||.||.|..||
BL00382___thr 1841 CCGTCAACGTCCGCAAATACGGAGAGCAAAAATCAGAAACGGTTGCAATT 1890
BSNT_04224___ 1891 GATGAGTTTGTGAAAAAGGCAGTAGCTGAAGCGAAAAAATAA 1932
|..||.|||.|.|||||.||.||.||||||||.||.||||||
BL00382___thr 1891 GCAGACTTTATCAAAAAAGCCGTTGCTGAAGCAAAGAAATAA 1932
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