Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04243 and BL00392
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:21
# Commandline: needle
# -asequence dna-align/BSNT_04243.1.5803.seq
# -bsequence dna-align/BL00392___ytaF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04243-BL00392___ytaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04243-BL00392___ytaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04243
# 2: BL00392___ytaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 654
# Identity: 463/654 (70.8%)
# Similarity: 463/654 (70.8%)
# Gaps: 42/654 ( 6.4%)
# Score: 1517.5
#
#
#=======================================
BSNT_04243 1 ATGCAAATGGTT---TCTATACTGCTGCTGGCGTTGGCTGTCAGCTTGGA 47
||| |||.|| |||.|..||||||||||.||.||.|||||||||||
BL00392___yta 1 ATG---ATGTTTGCATCTTTCTTGCTGCTGGCATTTGCCGTCAGCTTGGA 47
BSNT_04243 48 CAGTTTTTCAGTCGGATTTACGTACGGATTGAGAAAAATGAAAATACCGT 97
|||||||||||||||||||||.|||||||||.||||..|||||||.||.|
BL00392___yta 48 CAGTTTTTCAGTCGGATTTACTTACGGATTGCGAAAGCTGAAAATCCCAT 97
BSNT_04243 98 TTAAAGCGATTTTGGTTATCGCCTGCTGTTCCGGTGCTGTCATGTTTATA 147
||||||||||||||.||||.||.|..||.||.|||||.||.||||.|||.
BL00392___yta 98 TTAAAGCGATTTTGATTATTGCTTTTTGCTCTGGTGCCGTGATGTATATT 147
BSNT_04243 148 TCCATGCTGATCGGAAGCTTTCTCACGAAGTTTTTTCCTGTATAT-GTGA 196
.|||||.|||||||||.|.||.|..||||.||..|.||.|| |.| ||.|
BL00392___yta 148 GCCATGATGATCGGAACCCTTTTGGCGAAATTCCTGCCCGT-TGTCGTAA 196
BSNT_04243 197 CGGAGAAGCTTGGCGGTTTGATATTGGTTGGAATCGGTGCGTGGGTTCTG 246
|.||.|.|||.||.|...|.||.||..|.||.|||||.||.|||||.|||
BL00392___yta 197 CAGAAAGGCTCGGAGCCGTCATCTTAATGGGGATCGGCGCATGGGTGCTG 246
BSNT_04243 247 TATCAATTTTTCAAACCGGCAAAAGATAAAGAAT-ACCTATTGCATGAAA 295
|||||.|||||||..||||..||||| |.||.|| .|.|.||...|||||
BL00392___yta 247 TATCAGTTTTTCAGGCCGGAGAAAGA-ACAGGATCTCGTCTTCTCTGAAA 295
BSNT_04243 296 AAACACTGCTTAATCTAGAGGT----TCGGTCATTAGGAATTGTGATTCA 341
||||.||..||||.||.||..| |||.|| |||||.|||||.||
BL00392___yta 296 AAACGCTCATTAACCTTGAATTGAAATCGCTC----GGAATCGTGATACA 341
BSNT_04243 342 TATTTTGAGAAAACCCATGAGTGCGGATATCGACAAATCGGGTGTGATCA 391
.||.||.||||||||.|..||.||.||.||.||.|||||.||..|.||.|
BL00392___yta 342 CATATTAAGAAAACCGACAAGCGCCGACATTGATAAATCAGGAATCATTA 391
BSNT_04243 392 ACGGAATTGAGGCGGTCTTATTGGGATTTGCCTTATCGATTGATGCCTTT 441
.|||.||.||.||..||.|..|.||.||.|||.|.||.|||||.||.||.
BL00392___yta 392 CCGGTATAGAAGCTTTCCTTCTCGGTTTCGCCCTCTCTATTGACGCGTTC 441
BSNT_04243 442 GGAGCAGGTATAGGCGCAGCCATTCTCGGTTTTTCGCCGATTGT---GAT 488
||.|||||.||.|||||.|||...||.||.|||||.|| ||| |||
BL00392___yta 442 GGCGCAGGGATCGGCGCGGCCGCGCTGGGCTTTTCCCC---TGTACCGAT 488
BSNT_04243 489 GAGCATCGCCGT-GGCAATCATGAGCTCGCTGTTTGTATCAATT---GGA 534
||||||..|.|| ||| |||||||||||..||||.|||| || |||
BL00392___yta 489 GAGCATTACGGTAGGC-ATCATGAGCTCATTGTTCGTAT---TTTGCGGA 534
BSNT_04243 535 ATCAATGCCGGCC-ATTTTCTGTCTAAGTGGAAATGGATCGATAAAATGG 583
||..|.||.|||| ||||| |.||.||.|||||.|||||.||||||.||.
BL00392___yta 535 ATACAGGCAGGCCGATTTT-TATCGAAATGGAACTGGATGGATAAACTGA 583
BSNT_04243 584 CGTTT-TTGCCGGGGCTTCTAT---TAATCACGATTGGGCTCTGGAAATT 629
|.||| ||.|||| |.||| |.||.|.|||.||..||||||||.|
BL00392___yta 584 CCTTTCTTCCCGG----TATATTGCTGATTATGATCGGCATCTGGAAACT 629
BSNT_04243 630 GTAA 633
||||
BL00392___yta 630 GTAA 633
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