Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04276 and BL00411
See
Amino acid alignment /
Visit
BSNT_04276 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04276___ytoI.1.5803.seq
# -bsequence dna-align/BL00411___ytoI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04276___ytoI-BL00411___ytoI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04276___ytoI-BL00411___ytoI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04276___ytoI
# 2: BL00411___ytoI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1350
# Identity: 1035/1350 (76.7%)
# Similarity: 1035/1350 (76.7%)
# Gaps: 48/1350 ( 3.6%)
# Score: 3916.5
#
#
#=======================================
BSNT_04276___ 1 GTGAAAGGCTTGGCAACGAAGCATGAACAAATTTTAACGTATATCGATTC 50
|||||.||.||.||.|||||.|||||||..|||||.|||||
BL00411___yto 1 ---------TTGGCGACAAAACACGAACAGATTTTAAAATATATTGATTC 41
BSNT_04276___ 51 ACTGCCTGTCGGTGAAAAAATTTCTGTCCGAAGAATTGCAAAGGAAATGA 100
..||.|||||||.||||||||.||.|||.|..|.|||||.||.|||||||
BL00411___yto 42 TTTGTCTGTCGGCGAAAAAATCTCCGTCAGGCGGATTGCCAAAGAAATGA 91
BSNT_04276___ 101 AAGTAAGCGAAGGAACCGCGTACAGAGCGATCAAGGAAGCAGAGAATAAA 150
||||.||.||||||||.||.|||||||||||.||.|||||.|||||||||
BL00411___yto 92 AAGTCAGTGAAGGAACTGCTTACAGAGCGATAAAAGAAGCCGAGAATAAA 141
BSNT_04276___ 151 GGGTTTGTCAGCACGATTGAACGTGTGGGCACAATCAGAATTGAACAAAA 200
|||||||||||||||||||||.|.||.||.||.|||||.||.||.|||||
BL00411___yto 142 GGGTTTGTCAGCACGATTGAAAGGGTCGGAACGATCAGGATCGAGCAAAA 191
BSNT_04276___ 201 GAAAAAAGAGAACATTGAAAAGCTTACCTATGCAGAGGTTGTAAATGTTA 250
||||||||||||.||||||||.||.||.|||||.||.||.||.|||||.|
BL00411___yto 192 GAAAAAAGAGAATATTGAAAAACTGACATATGCTGAAGTGGTGAATGTCA 241
BSNT_04276___ 251 TAGACGGACAAGTGCTCGGAGGCAGGGCAGGGCTCCATAAGACATTGAAT 300
|.|||||.||.|||||.||.||.|..||||||||.|||||.||..|.||.
BL00411___yto 242 TTGACGGCCATGTGCTTGGCGGAAAAGCAGGGCTTCATAAAACGCTCAAC 291
BSNT_04276___ 301 AAATTCGTCATCGGCGCGATGGAGCTTGACGCGATGATGCGTTACACCGC 350
||||||||||||||.||||||.|||||||.|||||||||.|.||.||||.
BL00411___yto 292 AAATTCGTCATCGGAGCGATGAAGCTTGATGCGATGATGAGATATACCGG 341
BSNT_04276___ 351 AGCGGGGAATCTTTTGATTGTCGGAAACAGAATCAATGCACACAGGCAGG 400
||||||.||.||..||||||||||.|||.|||||.||||.|||.|.||||
BL00411___yto 342 AGCGGGCAACCTGCTGATTGTCGGCAACCGAATCGATGCGCACCGCCAGG 391
BSNT_04276___ 401 CGCTTGAAGCGGGCGCGGCCGTATTGGTGACCGGGGGCTTTAACACGGA- 449
|..|.||||||||.||.||||||.|||||||.||.||.|||.|.|||||
BL00411___yto 392 CTTTGGAAGCGGGTGCTGCCGTACTGGTGACGGGCGGTTTTGATACGGAG 441
BSNT_04276___ 450 --TGACAGCATTGTGCAGCTGGCAGATGAGCTTGAACTGCCGATTTTATC 497
.||.|..|||| ||||.||.||...|||.||.||.|||.|..|.||
BL00411___yto 442 CCGGAGATTATTG---AGCTTGCCGACAGGCTCGAGCTCCCGGTCATTTC 488
BSNT_04276___ 498 CACGAGCTATGACACCTTTACAGTTGCCGCTATGATTAACCGGGCAATTT 547
.||.||||||||.||.|||||.||.||.||.|||||.|||.||||.||||
BL00411___yto 489 TACAAGCTATGATACGTTTACTGTAGCGGCGATGATCAACAGGGCGATTT 538
BSNT_04276___ 548 ATGACCAGCTGATCAAAAAAGAAATTGTTTTGGTGGAGGACATCCTAACA 597
||||||||||.||||||||||||.|.||..|.||.|||||.||..|.||.
BL00411___yto 539 ATGACCAGCTCATCAAAAAAGAAGTCGTGCTTGTTGAGGATATTTTGACT 588
BSNT_04276___ 598 CCTGCTGACCGCACGGTATATCTT-TCGCCTAAGGATAAACTTGAAAAAT 646
|||...||....||.||.| .||| ||.|||.|.||.||.||.||||.||
BL00411___yto 589 CCTTTAGAAAAAACAGTCT-GCTTATCACCTCATGAAAAGCTGGAAAGAT 637
BSNT_04276___ 647 GGTATGAGAAAAATTTTGAAACGGGGCACGGACGCTTCCCGGTTGTCGAC 696
|||||||||||||.||||||||.||||||||||||||.||..|.||.|||
BL00411___yto 638 GGTATGAGAAAAACTTTGAAACTGGGCACGGACGCTTTCCCATCGTTGAC 687
BSNT_04276___ 697 GATCAAATGAAAATCCATGGCATTCTGACATCAAAAGATATTGCTGGCCA 746
||.||.|||||||||||.||||||.|.||.||.||.||..||||.||..|
BL00411___yto 688 GAGCAGATGAAAATCCACGGCATTTTAACTTCGAAGGACGTTGCCGGATA 737
BSNT_04276___ 747 TGACCGAAATGCATCTATAGAAAAAGTCATGACCAAAAATCCCG-TCACG 795
||||||.|.||.||..||.||||||||||||||.||||| |||| |.||.
BL00411___yto 738 TGACCGCAGTGTATTGATTGAAAAAGTCATGACGAAAAA-CCCGATTACA 786
BSNT_04276___ 796 GTTATTGGGAAAACATCTGTCGCTTCAGCTGCGCAAATGATGGTATGGGA 845
||.||.||.|||||.|||||.||||||||.|||||.||||||||.|||||
BL00411___yto 787 GTGATCGGAAAAACGTCTGTTGCTTCAGCCGCGCAGATGATGGTCTGGGA 836
BSNT_04276___ 846 AGGGATCGAAGTGCTTCCCGTCACTGACGGCCACCAAAAACTCATCGGCA 895
||||||||||||||||||||||..|||||..|..|||||.||.|||||||
BL00411___yto 837 AGGGATCGAAGTGCTTCCCGTCGTTGACGAGCGGCAAAAGCTGATCGGCA 886
BSNT_04276___ 896 TGATCAGCCGCCAAGACGTATTGAAAGCTCTTCAAATGATTCAAAAGCAG 945
||||||||.|.||.||.|||||.||.||.|||||||||||.|||||.|||
BL00411___yto 887 TGATCAGCAGGCAGGATGTATTAAAGGCGCTTCAAATGATCCAAAAACAG 936
BSNT_04276___ 946 CCGCAGGTCGGGGAGAAGCTTGATGATATCGTTTCAAGGGGGTTT-AAAG 994
|||||||||||.||.||.||.|||||.|||||..| .||.||||| ||||
BL00411___yto 937 CCGCAGGTCGGAGAAAAACTCGATGACATCGTGAC-CGGCGGTTTCAAAG 985
BSNT_04276___ 995 ATGAGGGTGATGATAAAGAAGATCAA-------ACGGTTTACGAGTATGA 1037
|...||...||||.||| |.||| .||||.||..|.||.||
BL00411___yto 986 AATCGGACCATGACAAA----AACAAGCCGGCTCCGGTCTATCAATACGA 1031
BSNT_04276___ 1038 AGTCACGCCGCAAATGACAAATCAGCTT-GGAACCATTTCTTATGGCGTA 1086
|||.|||||||||||||||||.|| ||| ||.||.|||||.||.|||||.
BL00411___yto 1032 AGTAACGCCGCAAATGACAAACCA-CTTGGGGACGATTTCCTACGGCGTG 1080
BSNT_04276___ 1087 TTTACGACCATTTTGACGCAAGCGGCAAACCGATTTTTGCGCTCG---AA 1133
||||||||.||||||||..||||.||||||||.||||||||.||| ||
BL00411___yto 1081 TTTACGACGATTTTGACCGAAGCTGCAAACCGCTTTTTGCGGTCGCGCAA 1130
BSNT_04276___ 1134 AAAACGCGGCGAACTCGTCATAGAGAGCATCACCATCTTCTTTTTGAAGC 1183
|||| |||||.|||||.|||||||||||.||.||.|..|||||.||||
BL00411___yto 1131 AAAA---GGCGAGCTCGTGATAGAGAGCATGACGATTTATTTTTTAAAGC 1177
BSNT_04276___ 1184 CTGTGCAGATGGAATCAGTCATCGAAGTCAAACCTCGCATCTTGGAGGCT 1233
|||||||.|||||.||.|||||.|||.|.|||||...|||..|.||.||.
BL00411___yto 1178 CTGTGCAAATGGAGTCTGTCATTGAAATAAAACCGAACATTCTCGAAGCC 1227
BSNT_04276___ 1234 GGCAGAAAGTTTGGGAAAATGGAAGTGGAAG---TGCACAGCCAAGGTCA 1280
||.||||||||.|||||||||||..|.|||| |.|| |||.|||..
BL00411___yto 1228 GGGAGAAAGTTCGGGAAAATGGATATAGAAGTTTTTCA---CCAGGGTGC 1274
BSNT_04276___ 1281 TATCGT-GTCTAAAGCGATGCTGATGGTTCAGCTGATGGAAAGAAGCTAA 1329
|.|.|| |.| |||||||||.|||||||||||||||||||||||||||||
BL00411___yto 1275 TCTAGTCGGC-AAAGCGATGATGATGGTTCAGCTGATGGAAAGAAGCTAA 1323
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.