Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04288 and BL00417

See Amino acid alignment / Visit BSNT_04288 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence dna-align/BSNT_04288___argG.1.5803.seq
#    -bsequence dna-align/BL00417___argG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04288___argG-BL00417___argG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04288___argG-BL00417___argG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04288___argG
# 2: BL00417___argG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1215
# Identity:     961/1215 (79.1%)
# Similarity:   961/1215 (79.1%)
# Gaps:           6/1215 ( 0.5%)
# Score: 3772.0
# 
#
#=======================================

BSNT_04288___      1 ATGTCAGAACAGAAAAAAGTCGTATTAGCATACTCAGGAGGTCTTGATAC     50
                     |||.|..||.||||||||||.|||||||||||.||||||||.||||||||
BL00417___arg      1 ATGACGCAAAAGAAAAAAGTGGTATTAGCATATTCAGGAGGACTTGATAC     50

BSNT_04288___     51 TTCCGTCGCAATAAAATGGCTTCAGGAGCAAGGATATAATGTAATCGCCT    100
                     |||.|||||.|||||.|||||||||||.||.||||||.|||||.|.||||
BL00417___arg     51 TTCTGTCGCGATAAAGTGGCTTCAGGAACAGGGATATGATGTAGTGGCCT    100

BSNT_04288___    101 GCTGTCTGGATGTCGGTGAGGGCAAAGATTTGGCATTTGTTCAGCAGAAA    150
                     ||||.||.||.|||||.|||||.||.|||.|.||.|||||||||||.|||
BL00417___arg    101 GCTGCCTTGACGTCGGAGAGGGAAAGGATCTCGCCTTTGTTCAGCAAAAA    150

BSNT_04288___    151 GCGCTTGAAGTCGGCGCGACAAACTCCTACGTGATCGATGCAAAAGAAGA    200
                     ||||||.|||||||.||..|.||.||.||.||.|||||||||||||||||
BL00417___arg    151 GCGCTTCAAGTCGGAGCCTCTAATTCTTATGTTATCGATGCAAAAGAAGA    200

BSNT_04288___    201 ATTTGCACAGGACTACGCGCTTATTTCTTTGCAGGCCCACACGATGTATG    250
                     ||||||..|.||.|..|||||.|...|..|.||||||||||||.|.||||
BL00417___arg    201 ATTTGCGAAAGAGTTTGCGCTGACCGCCCTCCAGGCCCACACGCTTTATG    250

BSNT_04288___    251 AAGGAAAATACCCGCTTGTTTCGGCATTATCTCGACCGCTGATCGCGAAA    300
                     |||||||.||.|||||.||.||.||..|.||..|||||||||||||.|||
BL00417___arg    251 AAGGAAAGTATCCGCTCGTATCAGCCCTGTCCAGACCGCTGATCGCCAAA    300

BSNT_04288___    301 AAACTGGTTGAAATAGCGGAAAAAGAAGATGCACAGGCGATTGCCCACGG    350
                     ||.||.||.|||.|.||.||.||||||.|.||.||.||..|.||.|||||
BL00417___arg    301 AAGCTCGTCGAAGTGGCTGAGAAAGAAAACGCGCAAGCCGTGGCTCACGG    350

BSNT_04288___    351 ATGCACAGGGAAAGGAAATGACCAGGTTCGTTTTGAAGTCTCCATTAAAT    400
                     .||||||||.|||||.||||||||.||.||.||.||.||.||.|||||||
BL00417___arg    351 CTGCACAGGCAAAGGGAATGACCAAGTGCGCTTCGAGGTGTCGATTAAAT    400

BSNT_04288___    401 CATTAAACCCTGATCTTGAAGTCATCGCGCCGGTTCGCGAATGGCAGTGG    450
                     |..|.||.||.|||.|.||.||..|.||.||.||.|||||||||.|.|||
BL00417___arg    401 CGCTCAATCCGGATTTGGAGGTGCTGGCACCTGTGCGCGAATGGAAATGG    450

BSNT_04288___    451 TCACGTGAAGAAGAAATTGAATATGCGGCTAGCCGCGGCATTCCGATTCC    500
                     ||.||.||.|||||.||.|..|||||.|..|..|..||||||||.|||||
BL00417___arg    451 TCTCGCGACGAAGAGATCGCGTATGCAGAAAAGCATGGCATTCCAATTCC    500

BSNT_04288___    501 GATCAATCTTGACAGCCCGTATTCTATCGACCAAAACCTCTGGGGACGCG    550
                     ||||||||||||||||||||||||.||||||||.|||||.|||||..|..
BL00417___arg    501 GATCAATCTTGACAGCCCGTATTCAATCGACCAGAACCTGTGGGGCAGAA    550

BSNT_04288___    551 CCAATGAGTGCGGCATTTTAGAAGATCCATGGGCGGCGCCGCCAGAAGGT    600
                     .||||||.|||||..|..|.||||||||.|||||.|||||.||.|||||.
BL00417___arg    551 GCAATGAATGCGGAGTCCTGGAAGATCCTTGGGCCGCGCCTCCTGAAGGA    600

BSNT_04288___    601 GCATACGATTTAAC--AGCTCCGCTGGAAAAAACGCCGGACACGCCGGAA    648
                     ||.||.|||||.||  ||  ||.||.||||||||.|||||.||.||.||.
BL00417___arg    601 GCGTATGATTTGACGAAG--CCTCTTGAAAAAACACCGGATACTCCTGAT    648

BSNT_04288___    649 GTGATTGAAATTGCATTTGAACAGGGCGTGCCTGTCTCCATTGACGGTGT    698
                     |||||.|||||.||.||||||.|.|||||.||.||.||||||||||| |.
BL00417___arg    649 GTGATCGAAATCGCTTTTGAAGAAGGCGTTCCCGTATCCATTGACGG-GA    697

BSNT_04288___    699 TTC-CTACTCGCTTTCTGAGCTGATCTTGAAGCTGAATGAAATGGCGGGG    747
                     .|| ||||.||||.||.||..||||.||.||||||||||||.|||||||.
BL00417___arg    698 CTCACTACCCGCTGTCAGACTTGATTTTAAAGCTGAATGAACTGGCGGGC    747

BSNT_04288___    748 GCGCACGGTGTCGGACGTATCGACCACGTGGAAAACCGCCTCGTCGGCAT    797
                     ||.||.||.||.||.||.||||||||.||.|||||||||||.||||||||
BL00417___arg    748 GCACATGGAGTGGGGCGCATCGACCATGTTGAAAACCGCCTTGTCGGCAT    797

BSNT_04288___    798 TAAATCCCGGGAAGTATACGAATGCCCTGGTGCGATGACACTGATCAAAG    847
                     .|||||.||.|||||.|||||||||||.||.||||||||..||||.||.|
BL00417___arg    798 CAAATCGCGCGAAGTTTACGAATGCCCGGGCGCGATGACTTTGATTAAGG    847

BSNT_04288___    848 CGCATAAAGAATTAGAAGATTTGACACTGGTGAAAGAGGTAGCCCACTTT    897
                     ||||.||.||..|.||||||||||||.||||.|||||.||.||.||.||.
BL00417___arg    848 CGCACAAGGAGCTTGAAGATTTGACATTGGTAAAAGAAGTGGCGCATTTC    897

BSNT_04288___    898 AAACCGATCATCGAGCAAAAAATGTCAGAGATCATTTACAACGGCTTATG    947
                     |||||.||.|||||.|||||||||.|.||..|.||.||.||||||.|.||
BL00417___arg    898 AAACCTATAATCGAACAAAAAATGGCTGAAGTGATCTATAACGGCCTCTG    947

BSNT_04288___    948 GTTCTCGCCGTTAAAAGATGCGCTGCACGCTTTCTTAAAAGAAACGCAAA    997
                     |||.||.|||.|.|||||.|||||...||.||||.|.|||||||||||.|
BL00417___arg    948 GTTTTCTCCGCTTAAAGACGCGCTTTCCGGTTTCCTGAAAGAAACGCAGA    997

BSNT_04288___    998 AGCATGTCACAGGCATTGTCCGCGTGAAGCTGTTTAAAGGCCATGCAATT   1047
                     ||||||||||.|||.|.||||||||.||||||||||||||||||||.||.
BL00417___arg    998 AGCATGTCACGGGCGTCGTCCGCGTCAAGCTGTTTAAAGGCCATGCGATC   1047

BSNT_04288___   1048 GTAGAAGGACGTAAATCAGAATACTCTCTATATGATGAAAAACTTGCAAC   1097
                     ||.|||||.|||||.||.||||||||.||.|||||||||||.|||||.||
BL00417___arg   1048 GTTGAAGGGCGTAAGTCCGAATACTCCCTGTATGATGAAAAGCTTGCGAC   1097

BSNT_04288___   1098 ATATACAAAAGACGATGCATTTGATCACCATGCAGCAATTGGATTTATCG   1147
                     .||||||||||||||||||||.|||||.||.||.|||.|.||.|||||||
BL00417___arg   1098 GTATACAAAAGACGATGCATTCGATCATCACGCTGCAGTCGGCTTTATCG   1147

BSNT_04288___   1148 AGCTTTGGGGACTTCCGACAAAAGTGAACAGCATCGTGAAAAAGAAGGAG   1197
                     ||||.||||||||.|||||.|||||.|||||||||||..||||.||||||
BL00417___arg   1148 AGCTGTGGGGACTGCCGACGAAAGTAAACAGCATCGTCCAAAAAAAGGAG   1197

BSNT_04288___   1198 CAGATTAAAGCATGA   1212
                     |||||||||||||||
BL00417___arg   1198 CAGATTAAAGCATGA   1212


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