Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04289 and BL00418
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence dna-align/BSNT_04289___moaB.1.5803.seq
# -bsequence dna-align/BL00418___moaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04289___moaB-BL00418___moaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04289___moaB-BL00418___moaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04289___moaB
# 2: BL00418___moaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity: 378/541 (69.9%)
# Similarity: 378/541 (69.9%)
# Gaps: 50/541 ( 9.2%)
# Score: 1327.5
#
#
#=======================================
BSNT_04289___ 1 ATGAGCGTTCAAGAGCATAAACAAGAAGCTCCCGATATCGTTCGGTGCAA 50
|||||.|||.|||||||||||.|||||||.||.||...|||....|||||
BL00418___moa 1 ATGAGTGTTGAAGAGCATAAAAAAGAAGCGCCGGACTGCGTCAACTGCAA 50
BSNT_04289___ 51 AGTGATTACTGTCAGTGACACGAGGACAGAGGAAACCGATAAAAGCGGCA 100
|||.|||||||||||.||.||.||.||.||.||.||.||||||||||||.
BL00418___moa 51 AGTCATTACTGTCAGCGATACAAGAACGGAAGACACGGATAAAAGCGGCC 100
BSNT_04289___ 101 AGCTGATGATCTCA----TTTTTAGAAGAAGCCGGTCATCATATTGCCGC 146
.|||.|||| | |||||||..||||||||||||.|.||.|...|
BL00418___moa 101 GGCTCATGA----AAGAGTTTTTAGCGGAAGCCGGTCATGAGATCGTTTC 146
BSNT_04289___ 147 ATATGAAATTGTAAAAGACGAAAAGG------------ATGCTTTGCAGC 184
.|||||.||||||||.|||||||||| |.|||
BL00418___moa 147 CTATGAGATTGTAAAGGACGAAAAGGAAATAATTCAAAAAGCT------- 189
BSNT_04289___ 185 GGTCAGTGCTTGCGGGCTGCATGGATGAACAGACAGACGCGGTACTCTTA 234
|||||....|||||..|.||.||.|.||..||.||.||.||.|||
BL00418___moa 190 -----GTGCTGAAAGGCTGTCTCGACGACCGGATCGATGCCGTCCTATTA 234
BSNT_04289___ 235 AACGGAGGGACAGGCATAGC----AGATCGGGATGTCACAATTGAAGCCA 280
|||||||||||.|||||.|| ||| |||||.|||||.||..|.|
BL00418___moa 235 AACGGAGGGACTGGCATTGCCTCAAGA----GATGTAACAATCGAGTCGA 280
BSNT_04289___ 281 TAACG--CCGCTGTTTTCGAAAGAACTGCCCGGCTTTGGAGAAATATTCA 328
| || ||.||.||||||||||||.|.||.||.||.||.||.||||||.
BL00418___moa 281 T--CGTTCCTCTTTTTTCGAAAGAAATTCCGGGGTTCGGGGAGATATTCC 328
BSNT_04289___ 329 GGATGCTGAGTTATACAGAGGATATCGGCTCTGCCGCAATCATGTCGAGA 378
|.||||||||||||||||||||||||||..|.||.||.|||.|.||.||.
BL00418___moa 329 GCATGCTGAGTTATACAGAGGATATCGGAGCGGCTGCGATCCTCTCAAGG 378
BSNT_04289___ 379 GCAACTGCCGGCGTCATTCAGCATACCGCTGTTTTCTCAACGCCAGGCTC 428
||..|.||.||.||.|||||..|.|..||.||.||..||||.||.||.||
BL00418___moa 379 GCTGCAGCAGGTGTTATTCAAAACAAAGCCGTATTTGCAACACCGGGTTC 428
BSNT_04289___ 429 AAGCGGCGCGGTAAAGCTGGCAATGAATAAGCTGATTATTCCCGAACTTG 478
||||||.||.||||||||.||||||...|||||||||.|.||.||.||||
BL00418___moa 429 AAGCGGTGCCGTAAAGCTTGCAATGTCAAAGCTGATTGTGCCTGAGCTTG 478
BSNT_04289___ 479 CACATGTGGTCAGAGAAATCAGAAAAG------ACAAGTAA 513
|.|||||..||||||||.|.||||||| |.||||||
BL00418___moa 479 CCCATGTCATCAGAGAACTGAGAAAAGATATGAAAAAGTAA 519
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