Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04291 and BL00419

See Amino acid alignment / Visit BSNT_04291 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence dna-align/BSNT_04291___ackA.1.5803.seq
#    -bsequence dna-align/BL00419___ackA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04291___ackA-BL00419___ackA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04291___ackA-BL00419___ackA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04291___ackA
# 2: BL00419___ackA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1308
# Identity:     977/1308 (74.7%)
# Similarity:   977/1308 (74.7%)
# Gaps:         132/1308 (10.1%)
# Score: 3982.0
# 
#
#=======================================

BSNT_04291___      1 ATGTTTAAATGGAAAAGTCAGATATTTTTCGGAGAAGATGTTGATATTCA     50
                                                                       
BL00419___ack      0 --------------------------------------------------      0

BSNT_04291___     51 CCGGGAAAAAAGTACGAAAAACGAAGTTGTTGATACAGAGTATAAAGGAG    100
                                                                       
BL00419___ack      0 --------------------------------------------------      0

BSNT_04291___    101 CGTCAATCATGTCCAAAATTATTGCAATTAACGCAGGAAGCTCGTCTTTG    150
                             ||||||||||||||||||||.||.||.||||||||.||..||
BL00419___ack      1 --------ATGTCCAAAATTATTGCAATCAATGCTGGAAGCTCATCACTG     42

BSNT_04291___    151 AAATTTCAGCTTTTCGAAATGCCTTCA--GAAACCGTTTTAACGAAGGGT    198
                     ||||||||.||.|||||||||||  ||  ||||..||.|||||.||.||.
BL00419___ack     43 AAATTTCAACTGTTCGAAATGCC--CAGCGAAAAAGTATTAACAAAAGGC     90

BSNT_04291___    199 TTAGTTGAACGAATCGGTATCGCCG----ACAGCGTATTCACAATTTCTG    244
                     .|.|||||.||||||||    ||.|    ||.||.|.|||||.|||||.|
BL00419___ack     91 CTTGTTGAGCGAATCGG----GCTGGATAACGGCATCTTCACGATTTCCG    136

BSNT_04291___    245 TGAACGGCGAAAAAAATACAGAAGTAACTGATATTCCGGATCATGCGGTA    294
                     |.||||.|||||||||.||.|||..|||.|||||||||||||||.|.|||
BL00419___ack    137 TCAACGACGAAAAAAAGACTGAAACAACAGATATTCCGGATCATTCCGTA    186

BSNT_04291___    295 GCTGTTAAAATGCTGCTGAATAAGTTAACGGAATTCGGCATTATTAAAGA    344
                     |||||.||||||||||||.||||..|.||..|||||||||||||.||.||
BL00419___ack    187 GCTGTAAAAATGCTGCTGGATAAACTGACAAAATTCGGCATTATCAAGGA    236

BSNT_04291___    345 CTTGAATGAAATTGACGGAATTGGCCATCGTGTCGTTCACGGCGGAGAAA    394
                     .||.||||||||.||||||||.||.||.||.|||||.||||||||.||||
BL00419___ack    237 TTTAAATGAAATCGACGGAATCGGTCACCGCGTCGTACACGGCGGCGAAA    286

BSNT_04291___    395 AATTCAGCGATTCTGTTTTATTAACGGATGAAA----CCATTAAGGAAAT    440
                     |.||||||||.||.||||||||.||||||||||    ||||    ||.||
BL00419___ack    287 AGTTCAGCGACTCCGTTTTATTGACGGATGAAATGATCCAT----GAGAT    332

BSNT_04291___    441 CGAAGATATTTCTGAATTGGCACCGCTTCACAATCCGGCAAATATCGTTG    490
                     ||||||.|||||.||..|.|||||||||||.||.|||||.|||||.||.|
BL00419___ack    333 CGAAGAGATTTCAGAGCTTGCACCGCTTCATAACCCGGCCAATATTGTCG    382

BSNT_04291___    491 GAATTAAAGCGTTCAAAGAAGTGCTTCCAAATGTTCCTGCGGTAGCTGTA    540
                     |||||||||||||.||||||||.|||||.|||||||||||.||.||.||.
BL00419___ack    383 GAATTAAAGCGTTTAAAGAAGTTCTTCCGAATGTTCCTGCCGTGGCCGTT    432

BSNT_04291___    541 TTTGATACGGCATTCCACCAAACAATGCCTGAGCAGTCTTACCTGTACAG    590
                     |||||||||||||||||.|||||.|||||.||.||.|||||.||||||||
BL00419___ack    433 TTTGATACGGCATTCCATCAAACGATGCCGGAACAATCTTATCTGTACAG    482

BSNT_04291___    591 CCTGCCGTATGAATACTATGAAAAATTCGGCATCCGTAAATACGGCTTCC    640
                     .|||||.||||||||.|||||.|||||||||||||||||||||||.||||
BL00419___ack    483 TCTGCCATATGAATATTATGAGAAATTCGGCATCCGTAAATACGGTTTCC    532

BSNT_04291___    641 ACGGCACTTCACATAAATATGTAACTGAGCGTGCGGCAGAGCTTCTCGGC    690
                     |.||.||.||.|||||||||||.|||||.||.|||||||||||.||.|||
BL00419___ack    533 ATGGTACATCTCATAAATATGTGACTGAACGCGCGGCAGAGCTGCTTGGC    582

BSNT_04291___    691 CGTCCG-TTAAAAGACTTGCGCCTGATTTCCTGCCACCTTGGAAACGGAG    739
                     |||||| ||.||..|||| |||||||||||||||||||||||||||||||
BL00419___ack    583 CGTCCGATTGAAGAACTT-CGCCTGATTTCCTGCCACCTTGGAAACGGAG    631

BSNT_04291___    740 CAAGTATTGCCGCTGTTGAAGGCGGAAAATCTATTGACACATCCATGGGC    789
                     |.||.||.||.||||||||||||||.|||||.||.||.|||||.||||||
BL00419___ack    632 CGAGCATCGCAGCTGTTGAAGGCGGCAAATCAATCGATACATCAATGGGC    681

BSNT_04291___    790 TTTACGCCGCTTGCCGGTGTAGCAATGGGCACACGCTCTGGAAACATCGA    839
                     ||.||.||||||||.||||||||.|||||.||.||.||.||.||||||||
BL00419___ack    682 TTCACACCGCTTGCAGGTGTAGCGATGGGTACGCGTTCAGGTAACATCGA    731

BSNT_04291___    840 CCCTGCCCTGATCCCATACATCATGGAGAAAACAGGCCAAACGGCTGACG    889
                     .|||||.||.|||||.|.|||.|||||.|||||.||.|||||.||.||||
BL00419___ack    732 TCCTGCGCTTATCCCGTTCATTATGGAAAAAACGGGTCAAACAGCCGACG    781

BSNT_04291___    890 AAGTACTGAATACATTAAACAAAAAAAGCGGACTGCTCGGCATTTCCGGT    939
                     ||||.|||||.||..|.||.||.||.|||||.||..|.||.|||||.||.
BL00419___ack    782 AAGTCCTGAACACGCTCAATAAGAAGAGCGGTCTTTTGGGTATTTCTGGA    831

BSNT_04291___    940 TTCTCAAGCGATCTTCGTGACATCGTTGAAGCAACGAAAGAAGGAAATGA    989
                     ||||||||||||.|.||.||.||||||||||||||.||||||||.|||||
BL00419___ack    832 TTCTCAAGCGATTTGCGCGATATCGTTGAAGCAACTAAAGAAGGCAATGA    881

BSNT_04291___    990 GCGCGCGGAAACGGCTCTTGAAGTATTCGCAAGCAGAATCCACAAATACA   1039
                     .||.||||||||.||.||.||||||||||||||||||||.||.|||||||
BL00419___ack    882 ACGTGCGGAAACAGCACTCGAAGTATTCGCAAGCAGAATTCATAAATACA    931

BSNT_04291___   1040 TCGGTTCTTACGCTGCAAGAATGAGCGGTGTCGATGCGATCATCTTTACT   1089
                     ||||||||||.||.||..||||||||||.||.||.|||||.||.||.|||
BL00419___ack    932 TCGGTTCTTATGCAGCGCGAATGAGCGGAGTAGACGCGATTATTTTCACT    981

BSNT_04291___   1090 GCCGGTATCGGTGAAAACAGTGTGGAAGTCAGAGAACGCGTTCTGCGCGG   1139
                     |||||.|||||.||||||||.||.|||||||||||.||||||||.|..||
BL00419___ack    982 GCCGGCATCGGGGAAAACAGCGTTGAAGTCAGAGAGCGCGTTCTTCATGG   1031

BSNT_04291___   1140 TTTAGAATTCATGGGCGTATACTGGGATCCTGCGCTT-AATAACGTGCGC   1188
                     |||.||||||||||||||.||.|||||.||||| ||| ||||||||.|||
BL00419___ack   1032 TTTGGAATTCATGGGCGTCTATTGGGACCCTGC-CTTGAATAACGTCCGC   1080

BSNT_04291___   1189 GGCGAGGAAGCTTTCATCAGCTATCCGCATTCTCCAGTAAAAGTCATGAT   1238
                     ||..|.|||||.||.||||||||.||||||||.||.|||||||||||..|
BL00419___ack   1081 GGAAAAGAAGCGTTTATCAGCTACCCGCATTCGCCTGTAAAAGTCATCGT   1130

BSNT_04291___   1239 CATTCCGACTGATGAAGAAGTCATGATTGCGCGCGACGTTGTTCGTTTAG   1288
                     |||||||||..||||||||||.||||||||..|.|||||.||..|..|.|
BL00419___ack   1131 CATTCCGACGAATGAAGAAGTAATGATTGCAAGAGACGTCGTCAGACTGG   1180

BSNT_04291___   1289 CAAAATAA   1296
                     ||.|.|||
BL00419___ack   1181 CACACTAA   1188


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