Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04298 and BL00424

See Amino acid alignment / Visit BSNT_04298 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence dna-align/BSNT_04298___yteJ.1.5803.seq
#    -bsequence dna-align/BL00424___yteJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04298___yteJ-BL00424___yteJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04298___yteJ-BL00424___yteJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04298___yteJ
# 2: BL00424___yteJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 552
# Identity:     339/552 (61.4%)
# Similarity:   339/552 (61.4%)
# Gaps:          90/552 (16.3%)
# Score: 895.0
# 
#
#=======================================

BSNT_04298___      1 ATGGACGCGACATATGA---AGAGTTAGAGCGCAATGACAT------CAA     41
                     |||||.|.|||.|||||   |.||   ||.|..||||| ||      |.|
BL00424___yte      1 ATGGATGTGACTTATGATGGAAAG---GATCATAATGA-ATTATCGCCGA     46

BSNT_04298___     42 AGGCCCGC----------AAGAAGCGGAGCAGC-TG-ACA-CATGCCTAT     78
                     |.|.|.||          |||||.|||..|.|| || |.| |||||||||
BL00424___yte     47 ATGTCGGCGTTTCCAGGGAAGAATCGGCCCCGCATGTAGAGCATGCCTAT     96

BSNT_04298___     79 GCTGGCTTTTGGGTTC-----GTTTCTGGGCTTTCCTGCTTGATTGGCTC    123
                     ||.|| ||||.||.||     ||||    |||||.||||||||..||.| 
BL00424___yte     97 GCCGG-TTTTTGGATCAGGCTGTTT----GCTTTTCTGCTTGACGGGGT-    140

BSNT_04298___    124 GTGATATGGG--GATTAAACCA-TTTGCTCGTTTCTCCCCTCTTTACCGT    170
                      ||.|||.||  |..|.|||.| ||.|| .|||||.|||.|.||.|.|.|
BL00424___yte    141 -TGTTATCGGCAGCATCAACAACTTAGC-GGTTTCACCCGTTTTCAGCCT    188

BSNT_04298___    171 ATTGGATCTGCCGAAAACATCCGGCATGTTTACCTTCTCGGCCTACA---    217
                     ..||.|.||.||.|||..|||.||..|.||.|||||.|||  ||..|   
BL00424___yte    189 GCTGAACCTCCCTAAAGAATCAGGGTTTTTCACCTTTTCG--CTTTATTC    236

BSNT_04298___    218 --GTGTGACAACG--CTTATTGTGTATCTTGCCTATTTCGCACTAATGAC    263
                       .||||||..||  ..||||     |.||||.||.||.|..||.|||||
BL00424___yte    237 TTTTGTGACGGCGGCAGTATT-----TTTTGCTTACTTTGTCCTGATGAC    281

BSNT_04298___    264 AAAATACTTCAGGCAGACGCTTGGTAAAATGGTGTTCGGCCTCAAAGTGG    313
                     .||.||.|||.|.||||||.|.||.||.|||||.|||||.||.||.||.|
BL00424___yte    282 GAAGTATTTCGGACAGACGTTGGGCAAGATGGTATTCGGGCTGAAGGTCG    331

BSNT_04298___    314 TTTC---TGT----GAAGCGAGATAGCAAGCTGACATGGAGTACAGTGAT    356
                     |.||   |||    |||     |.||  .||||||||||..|...||..|
BL00424___yte    332 TGTCGCTTGTCCCGGAA-----AAAG--GGCTGACATGGGATGTGGTCCT    374

BSNT_04298___    357 TTTTCGTGAAGTGGTT----GGACGGTATATTGATAAGA-TTTGGATTTT    401
                     .|||.|.||    |||    ||.||.|||||   .||.| |||..||.||
BL00424___yte    375 GTTTAGGGA----GTTTATCGGCCGCTATAT---CAACAGTTTATATATT    417

BSNT_04298___    402 A--TATATCGTTGTTGCTTTTTCACCTACAAAACAAGGGATTCATGATTA    449
                     |  |||.||||.|..||.|||||.||||..||||||||||||||.||||.
BL00424___yte    418 ACGTATCTCGTAGCAGCGTTTTCGCCTAAGAAACAAGGGATTCACGATTT    467

BSNT_04298___    450 CATCGCGGATACCACCGTGGTGCATGAAAAATTATACCGCAAATAA----    495
                     |.|.|||||.||..|.||..|.|||||||||.|.||.||.|||.||    
BL00424___yte    468 CTTTGCGGACACTGCGGTTATCCATGAAAAACTGTATCGAAAAAAAGACT    517

BSNT_04298___    495 --    495
                       
BL00424___yte    518 GA    519


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