Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04331 and BL00444
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence dna-align/BSNT_04331___ccpA.1.5803.seq
# -bsequence dna-align/BL00444___ccpA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04331___ccpA-BL00444___ccpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04331___ccpA-BL00444___ccpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04331___ccpA
# 2: BL00444___ccpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1021
# Identity: 787/1021 (77.1%)
# Similarity: 787/1021 (77.1%)
# Gaps: 35/1021 ( 3.4%)
# Score: 2990.0
#
#
#=======================================
BSNT_04331___ 1 ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCAT 50
|||||.|||.|.||.||.||.||||||||..|.|||||.||||||||.||
BL00444___ccp 1 ATGAGTAATGTGACAATATATGATGTAGCACGCGAAGCAAATGTAAGTAT 50
BSNT_04331___ 51 GGCAACCGTTTCCCGTGTCGTGAACGGCAACCCGAATGTAAAACCGACAA 100
|||||||||||||||.|||||.|||||.||.||||||||.||.|||||.|
BL00444___ccp 51 GGCAACCGTTTCCCGGGTCGTCAACGGGAATCCGAATGTCAAGCCGACGA 100
BSNT_04331___ 101 CGAGAAAAAAAGT-CTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAA 149
|||||||.||.|| ||| |||||.||.||.|||||.||.||.||||||||
BL00444___ccp 101 CGAGAAAGAAGGTGCTT-GAAGCGATCGAGCGTCTTGGCTATCGTCCAAA 149
BSNT_04331___ 150 CGCGGTGGCAAGAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCA 199
|||.||||||||||||||||||||.|||||.||.||.|||||.||.||.|
BL00444___ccp 150 CGCCGTGGCAAGAGGGCTGGCAAGCAAAAAGACGACGACTGTCGGCGTGA 199
BSNT_04331___ 200 TCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCGCGCGGAATT 249
|||||||||||||.||.||.||.||.|||||||||||.|||.|.|||||.
BL00444___ccp 200 TCATTCCCGATATTTCCAGTATCTTTTATTCAGAGCTGGCGAGGGGAATC 249
BSNT_04331___ 250 GAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGA 299
|||||||||||.||.|||||.||.||||||||||||||||||||.||.||
BL00444___ccp 250 GAAGATATCGCAACGATGTACAAGTACAATATTATTTTGAGCAATTCCGA 299
BSNT_04331___ 300 CCAAAACATGGAGAAAGAGCTGCA-CTTGTTAAACACAATGCTCGGCAAA 348
|||.||.|||||.|||||.||.|| ||| ||.||.||.|||||.||.||.
BL00444___ccp 300 CCAGAATATGGACAAAGAACTTCATCTT-TTGAATACGATGCTAGGAAAG 348
BSNT_04331___ 349 CAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGT 398
|||||.|||||.|||||.||||||.|||||||..|.||.||.||||||||
BL00444___ccp 349 CAAGTTGACGGTATCGTCTTTATGAGCGGAAATGTGACTGAAGAGCATGT 398
BSNT_04331___ 399 GGCGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAG 448
||.||||||||||||.||.|||||.|||||.||.|||||.||.|||||.|
BL00444___ccp 399 GGAGGAATTTAAGCGATCGCCAGTTCCGATCGTGCTTGCGGCATCTGTTG 448
BSNT_04331___ 449 AAGAGCAGGAGGAAACACCGTCAGTCGCTATCGATTACGAACAGGCGATT 498
||||..|.|.||||||.|||||.||.||.||||||||.||||||||||||
BL00444___ccp 449 AAGAAAAAGGGGAAACGCCGTCGGTTGCGATCGATTATGAACAGGCGATT 498
BSNT_04331___ 499 TATGATGCCGTGAAGC-TTTTGGTTGATAAAGGACATACAG-ACATCGCG 546
||||||| ||..||.| |..||.||||.|||||.|||| || .|.|.|||
BL00444___ccp 499 TATGATG-CGGCAACCATGCTGATTGAGAAAGGCCATA-AGCGCCTTGCG 546
BSNT_04331___ 547 TTCGTTTCCGGACCAATGGCAGAACCG----ATCAACCGTTCGAAAAAAC 592
|||||.||.|||||.|||||.|||||| ||||| .|||||||||
BL00444___ccp 547 TTCGTCTCAGGACCTATGGCTGAACCGGTTAATCAA----GCGAAAAAAC 592
BSNT_04331___ 593 TCCAAGGCTACAAACGTGCGCTT--GAAGAAGCGAACCTTCCGTTTAATG 640
|.|||||||..|||.|.|||||| |.|.|||.| .||.|..|||||.|
BL00444___ccp 593 TGCAAGGCTTTAAAAGAGCGCTTGGGGATAAGGG--GCTGCAATTTAAGG 640
BSNT_04331___ 641 AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCA 690
||.|.|.|||.|..|||||.|||||.||.||.|||||.|||.|.|||||.
BL00444___ccp 641 AAGAGTATGTTGTAGAAGGCGATTATACGTACGATTCAGGAATGGAAGCG 690
BSNT_04331___ 691 CTGCAGCATCTGATGAGCCTGGATAAAAAACCGACAGCCATTCTTTCTGC 740
|||.||..|.|.||||..||||||.||||||||||||||.|.||.||.||
BL00444___ccp 691 CTGGAGGCTTTAATGAAGCTGGATGAAAAACCGACAGCCGTCCTGTCAGC 740
BSNT_04331___ 741 AACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCT 790
.||.||.||||||||.||||||.||||.||.||.||.||||||.|.||..
BL00444___ccp 741 GACAGACGAAATGGCGCTCGGCGTTATTCACGCAGCACAGGATAAAGGAC 790
BSNT_04331___ 791 TATCCATTCCGGAGGATCTCGACATTATCGGTTTTGATAATACAAG---- 836
|..|..|||||||.||.||.||..|.|||||||||||.||||||||
BL00444___ccp 791 TGGCTGTTCCGGATGACCTTGAAGTGATCGGTTTTGACAATACAAGGCTT 840
BSNT_04331___ 837 --ATTAAGCCTCATGGTTCGTCCTCAGCTTTCAACAGTTGTTCAGCCGAC 884
|||| ||||||||.||.|||||.||.||.||.||.|||||.||
BL00444___ccp 841 TCATTA------ATGGTTCGGCCGCAGCTGTCGACTGTCGTCCAGCCTAC 884
BSNT_04331___ 885 ATATGATATCGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATA 934
.|||||||||||.|||||.||||||||.||.|||||.|||||.|||||.|
BL00444___ccp 885 GTATGATATCGGTGCCGTGGCGATGAGGCTTCTGACAAAGCTGATGAACA 934
BSNT_04331___ 935 AAGAGCCGGTTGAAGAGCATATCGTCGAACTGCCGCACCGTATAGAGCTT 984
|||||...||.|||||||||||.|||.|.||||||||.||.||.||.||.
BL00444___ccp 935 AAGAGGAAGTCGAAGAGCATATTGTCCAGCTGCCGCATCGCATTGAACTC 984
BSNT_04331___ 985 AGAAAGTCAACCAAGTCATAA 1005
|||.|.|||||.||.|.|
BL00444___ccp 985 AGACAATCAACAAAATGA--- 1002
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