Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02075 and BL00469

See Amino acid alignment / Visit BSNT_02075 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence dna-align/BSNT_02075___yjjA.1.5803.seq
#    -bsequence dna-align/BL00469___hemD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02075___yjjA-BL00469___hemD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02075___yjjA-BL00469___hemD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02075___yjjA
# 2: BL00469___hemD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     562/873 (64.4%)
# Similarity:   562/873 (64.4%)
# Gaps:         105/873 (12.0%)
# Score: 1663.5
# 
#
#=======================================

BSNT_02075___      1 ATGGGAAAAGGGTT--ACTTGGAAAACGCGTGGCAATCGGTGGCTCACGA     48
                     .||||||||||.||  ||  ||.|.|.|..|.||.|||||.|..||.|||
BL00469___hem      1 TTGGGAAAAGGATTGAAC--GGCAGAAGAATTGCCATCGGAGCATCGCGA     48

BSNT_02075___     49 AAAACGGAAGAAATTAGTACAATCATTGAAAAACAGGGCGGAATACCTGT     98
                     ||||||||.|||||.||.||..|.||..||||.||.|||||..|.||..|
BL00469___hem     49 AAAACGGATGAAATGAGCACGCTGATCAAAAAGCAAGGCGGGGTTCCCCT     98

BSNT_02075___     99 CATCCGGCCTCTCCAAGGTACAGTTTACTTAGC----AGAGAAGCAGGTG    144
                     |||.||..|.||.||.|||||.||.|..||.||    |.|||||.|||  
BL00469___hem     99 CATTCGCTCCCTTCAGGGTACCGTGTTTTTGGCCGAAAAAGAAGTAGG--    146

BSNT_02075___    145 GAGCCGGATTTGCGGACGTTTGCGGAAGAAAA----AGCTGACTGGGTCA    190
                       .||.||||||||..|.||.|..|    |||    |||.||||||||.|
BL00469___hem    147 --CCCTGATTTGCGTGCCTTCGTTG----AAACGGGAGCCGACTGGGTGA    190

BSNT_02075___    191 TTTTCACGACAGGCATCGGGTTGGAGACTCTTGTCGATATGGCAGAGAAA    240
                     ||||||||||.||.||||||..|||.||.||||||....|.||.||||||
BL00469___hem    191 TTTTCACGACCGGAATCGGGACGGAAACGCTTGTCAGCCTAGCTGAGAAA    240

BSNT_02075___    241 ATTGGACTGAAAGAT----GAG---TTTCTGCAGGCCATTCGCCAAGCGA    283
                     .||||       |||    |||   |.|.|.||.||.||.|||...||||
BL00469___hem    241 CTTGG-------GATCGGAGAGCGCTATTTACAAGCGATCCGCAGGGCGA    283

BSNT_02075___    284 AAGCGGCATGCCGGGGATACAAAACGCTGTCTGCGCTGAAAAAGCTTGGA    333
                     |||||||||...|.||.||||||||..|..|.||..|.||||||||.||.
BL00469___hem    284 AAGCGGCATCGAGAGGCTACAAAACAATCGCCGCTTTAAAAAAGCTCGGC    333

BSNT_02075___    334 ATCACACCGGAAGCTTCGGATGAAGACGGGAC-AACAAGAGGCTTAATC-    381
                     ||.||.||.|..||..|||||||||||||.|| |.|||| ||..|.||| 
BL00469___hem    334 ATTACGCCCGTTGCGGCGGATGAAGACGGCACGACCAAG-GGACTGATCG    382

BSNT_02075___    382 ---CGTTCCTTGGAGCCTCACGACTTTTCAGGAAAAACAGTCATGGTGCA    428
                        ||.|||    |..|.|||||.|||||.||.|||...||.|||||.||
BL00469___hem    383 ACTCGCTCC----AATCCCACGATTTTTCCGGCAAACGGGTGATGGTTCA    428

BSNT_02075___    429 GCTTCATGGCGAAAAAGCGCCG-----GCTCTCATGGCATTTCTTGAAGA    473
                     |||.||.||||||||.||.|||     ||| |||    .|||.|.|||||
BL00469___hem    429 GCTCCACGGCGAAAACGCTCCGTCACTGCT-TCA----GTTTTTGGAAGA    473

BSNT_02075___    474 AAAAGGCGC-GTCTGTCCTGCCGATTCTGCCTTATCAGCACATCCCGCCG    522
                     .|||||.|| |.| ||..|.|||.|||||||.||||.|||..|..|.||.
BL00469___hem    474 GAAAGGTGCAGAC-GTTGTTCCGCTTCTGCCGTATCGGCATGTTGCTCCA    522

BSNT_02075___    523 GAGGAGGAAACGGTGG----AGCAGTTATGCCGAGAGCTGATGAACGATG    568
                     ||...||||||.||.|    |    ||.|||.|.|||.|.||.|||..||
BL00469___hem    523 GACCGGGAAACCGTCGCTTTA----TTGTGCAGCGAGATCATCAACCGTG    568

BSNT_02075___    569 AGGTCGATGCCGTTTGTTTTACAACGGCCATTCAGGTTCGTTCCCTGTTT    618
                     |.||.|||||.|||||.|||||||||||..|.||.||.||.||.||.|||
BL00469___hem    569 AAGTGGATGCGGTTTGCTTTACAACGGCTGTCCAAGTCCGCTCGCTTTTT    618

BSNT_02075___    619 GATTTTGCCAAGG-----GGC------GAGGTTATATCAATGAAGTGAAG    657
                     .||||.||.||.|     |||      |||        ||  ||.||...
BL00469___hem    619 CATTTCGCGAAAGAAAACGGCTATGCGGAG--------AA--AATTGTTC    658

BSNT_02075___    658 AAGGTATTCGAAGAACGCGCCATCGCAGCTGCTGTCGGAAAAGTGACTGC    707
                     ||..|.||| ||||..|||...|.||.||.|||||||||||||||||.||
BL00469___hem    659 AATCTTTTC-AAGACAGCGTGTTGGCGGCCGCTGTCGGAAAAGTGACGGC    707

BSNT_02075___    708 TGAAGCACTGCGGGAAGAGGGCATTACGA--GACTGCTTGCGCCAGAGAT    755
                     .|||||..|..|.|||||.||..|  |||  |.||.||.||.||.||..|
BL00469___hem    708 AGAAGCTTTAAGAGAAGAAGGAGT--CGAACGCCTTCTCGCTCCGGATCT    755

BSNT_02075___    756 TGAGCGGATGGGTGCGATGATTGTTGAGCTGGCCAAGTATTATGAA---G    802
                     .||.||||||||.|||||||||||.|||||.||...||.|||||||   |
BL00469___hem    756 CGAACGGATGGGAGCGATGATTGTGGAGCTAGCGCGGTTTTATGAAACGG    805

BSNT_02075___    803 AA-AAGGAATAA-----------    813
                     || |.||.||||           
BL00469___hem    806 AAGAGGGGATAAGAACACAGTAA    828


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