Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04239 and BL00476
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence dna-align/BSNT_04239___ytcD.1.5803.seq
# -bsequence dna-align/BL00476___ytcD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04239___ytcD-BL00476___ytcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04239___ytcD-BL00476___ytcD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04239___ytcD
# 2: BL00476___ytcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 382
# Identity: 294/382 (77.0%)
# Similarity: 294/382 (77.0%)
# Gaps: 5/382 ( 1.3%)
# Score: 1107.0
#
#
#=======================================
BSNT_04239___ 1 ATGGAGAAGAAAAAATATAACATTTCTGTTGAAGCGACTCTTGAAGTGAT 50
|||.||..||||||.|||||.||.|||||.|||||.||.|||||||||||
BL00476___ytc 1 ATGAAGCCGAAAAAGTATAATATATCTGTCGAAGCTACACTTGAAGTGAT 50
BSNT_04239___ 51 CGGTGGGAAATGGAAATGCGTCATTTTATGCCATCTGACGCACGGAAAAA 100
|||.|||||||||||||||||.|||||.||.||..||||||||||.||||
BL00476___ytc 51 CGGCGGGAAATGGAAATGCGTGATTTTGTGTCACTTGACGCACGGCAAAA 100
BSNT_04239___ 101 AACGCACAAGTGAATTAAAACGCCTAATGCCCAATATCACGCAAAAAATG 150
|||||||.||.||..|.||.||.||.|||||.||.||.|||||.||||||
BL00476___ytc 101 AACGCACGAGCGAGCTCAAGCGGCTGATGCCGAACATTACGCAGAAAATG 150
BSNT_04239___ 151 CTGACTCAGCAGCTGCGCGAGCTGGAAGCGGACAGTGTCATTAACCGAAT 200
|||||.||||||||||||||.|||||.|.||||.|.|||||.|||||.||
BL00476___ytc 151 CTGACCCAGCAGCTGCGCGAACTGGAGGAGGACGGCGTCATCAACCGGAT 200
BSNT_04239___ 201 CGTATATAATCAAGTTCCTCCCAAAGTGGAATACGAGCTCAGCGAATACG 250
|||.||..|.||.||.||.||.||.||.||||||||.|||||||||||||
BL00476___ytc 201 CGTGTACCAGCAGGTGCCGCCGAAGGTCGAATACGAACTCAGCGAATACG 250
BSNT_04239___ 251 GCCGCA-GCTTAGAAGGGATTTTAGATATGCTGTGTGCTTGGGGAGCGAA 299
|..|.| ||||| |||..|||||.|||..||||||..|.|||||.|..||
BL00476___ytc 251 GATGGACGCTTA-AAGACATTTTGGATTCGCTGTGCTCCTGGGGCGAAAA 299
BSNT_04239___ 300 TCATATTAACAGAGTGTACGGGGATACATTTTCTGTGCTAGAAGAAAGTG 349
.||.||||..|.||||||.||.||.|.||||.||||..|.||.||.||.|
BL00476___ytc 300 ACACATTACAAAAGTGTATGGAGACAAATTTGCTGTTTTGGAGGACAGCG 349
BSNT_04239___ 350 TGCTCAATGATAAGTTAAAACAGGAATCATAA 381
||||.|||||..|.|| |||||||.|||.|
BL00476___ytc 350 TGCTGAATGAACAATT---ACAGGAAACATGA 378
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