Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05262 and BL00491

See Amino acid alignment / Visit BSNT_05262 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence dna-align/BSNT_05262.1.5803.seq
#    -bsequence dna-align/BL00491___malL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05262-BL00491___malL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05262-BL00491___malL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05262
# 2: BL00491___malL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1709
# Identity:    1008/1709 (59.0%)
# Similarity:  1008/1709 (59.0%)
# Gaps:         520/1709 (30.4%)
# Score: 4285.0
# 
#
#=======================================

BSNT_05262         1 ATGAGTGAATGGTGGAAAGAAGCTGTCGTTTATCAAATTTACCCGCGCAG     50
                     |||||..|||||||||||||.||.|||||.|||||||||||||||||.||
BL00491___mal      1 ATGAGCCAATGGTGGAAAGAGGCAGTCGTGTATCAAATTTACCCGCGGAG     50

BSNT_05262        51 TTTTTATGATGCCAATGGAGATGGATTCGGGGATTTGCAAGGTGTGATTC    100
                     ||||||||||.||||.|||||.||.|||||.||||||||.||.|||||||
BL00491___mal     51 TTTTTATGATTCCAACGGAGACGGCTTCGGTGATTTGCAGGGGGTGATTC    100

BSNT_05262       101 AAAAGCTGGATTACATCAAAAATCTCGGGGCGGATGTCATCTGGCTCTCC    150
                     |||||||.|||||||||||||..||.||.||.||||||||.|||||.|..
BL00491___mal    101 AAAAGCTCGATTACATCAAAAGCCTTGGAGCCGATGTCATATGGCTGTGT    150

BSNT_05262       151 CCGGTATTTGATTCCCCGCAGGATGACAACGGATATGATATCAGCGATTA    200
                     ||.||.||||||||||||||||||||||||||.||.||.||||||||.||
BL00491___mal    151 CCTGTGTTTGATTCCCCGCAGGATGACAACGGCTACGACATCAGCGACTA    200

BSNT_05262       201 CAAAAACATGTATGAAAAGTTTGGGACAAATGAAGATATGTTTCAGCTGA    250
                     .|.||.|||.||.||||||||.|||||.||.||.|||||||||||..|||
BL00491___mal    201 TAGAAGCATATACGAAAAGTTCGGGACGAACGATGATATGTTTCAATTGA    250

BSNT_05262       251 TTGATGAAGTCCATAAACGCGGAATGAAAATCGTCATGGATTTGGTCGTG    300
                     ||||||||||.|||||||||||||||||||||.|.||||||.|.||||||
BL00491___mal    251 TTGATGAAGTGCATAAACGCGGAATGAAAATCATTATGGATCTTGTCGTG    300

BSNT_05262       301 AACCACACATCAGATGAGCATGCTTGGTTTGCTGAAAGCCGCAAGTCGAA    350
                     ||.|||||.||.|||||.|||||.||||||||.||||||||||||||.||
BL00491___mal    301 AATCACACGTCTGATGAACATGCCTGGTTTGCCGAAAGCCGCAAGTCAAA    350

BSNT_05262       351 GGACAATCCTTACCGGGATTATTATTTTTGGAAAGATCCTAAACCGGACG    400
                     |||||||||||||||.|||||||||||||||||.|||||.||..||||||
BL00491___mal    351 GGACAATCCTTACCGTGATTATTATTTTTGGAAGGATCCAAAGGCGGACG    400

BSNT_05262       401 GCTCAGAGCCGAATAATTGGGGATCGATCTTTTCAGGCTCAGCGTGGACA    450
                     |.|||||||||||.|||||||||||||||||||||||..|.||.|||||.
BL00491___mal    401 GTTCAGAGCCGAACAATTGGGGATCGATCTTTTCAGGGCCGGCATGGACG    450

BSNT_05262       451 TACGATGAAGGAACAGGGCAGTATTATTTGCACTACTTTTCGAAAAAACA    500
                     ..||||||..|.|||||.|||||||||.|.|||||||||||||||||.||
BL00491___mal    451 CTCGATGAGCGGACAGGACAGTATTATCTTCACTACTTTTCGAAAAAGCA    500

BSNT_05262       501 GCCTGATTTAAATTGGGAAAACGAAGCCGTTCGCCGGGAAGTTTATAATG    550
                     ||||||.|||||.|||||.||.|||||.||||||||.|||||.||..||.
BL00491___mal    501 GCCTGACTTAAACTGGGAGAATGAAGCGGTTCGCCGCGAAGTATACGATT    550

BSNT_05262       551 TAATGAGATTCTGGATGGATAGAGGCGTTGACGGCTGGCGGATGGATGTG    600
                     |.||||.|||.||||||||.||||||||.|||||||||||||||||.|||
BL00491___mal    551 TGATGACATTTTGGATGGACAGAGGCGTGGACGGCTGGCGGATGGACGTG    600

BSNT_05262       601 ATCGGTTCTATTTCTAAATACACCGATTTTCCGGACTACGAAACGGATCA    650
                     ||||||||.||.||.||||.|..|||.|||||.||.||.|||||.|||.|
BL00491___mal    601 ATCGGTTCCATCTCCAAATTCGTCGACTTTCCCGATTATGAAACAGATGA    650

BSNT_05262       651 CAGCCG--CAGCTATATTGTCGGCCGTTATCACTCTAACGGCCCCCGTCT    698
                     ||||||  ||  |||.|.||||||||.|||||.||.||||||||||||||
BL00491___mal    651 CAGCCGTCCA--TATGTCGTCGGCCGCTATCATTCGAACGGCCCCCGTCT    698

BSNT_05262       699 TCATGAGTTTATTCAAGAGATGAACAGGGAAGTGCTTTCTCATTACGACT    748
                     .||.||.|||||.||||||||||||.||||||||||.||.|.||||||||
BL00491___mal    699 GCACGAATTTATACAAGAGATGAACCGGGAAGTGCTGTCCCGTTACGACT    748

BSNT_05262       749 GCATGACAGTCGGAGAGGCAAACGGCTCTGACATTGAAGAGGCGAAAAAG    798
                     |.|||||.|||||.||.|||||||||||.||..|||||||.||||||||.
BL00491___mal    749 GTATGACGGTCGGCGAAGCAAACGGCTCAGATGTTGAAGAAGCGAAAAAA    798

BSNT_05262       799 TACACAGATGCAAGCAGGCAAGAGCTGAATATGATCTTTACATTTGAACA    848
                     |||||.|||.|||||||.||.||||||||.|||||.||||||||||||||
BL00491___mal    799 TACACGGATCCAAGCAGACATGAGCTGAACATGATTTTTACATTTGAACA    848

BSNT_05262       849 TATGGATATTGATACAGAACAAAACTCGCCAAATGGGAAATGGCAGATCA    898
                     |||||||||||||||..||||..|.||.||.|||||||||||||||||.|
BL00491___mal    849 TATGGATATTGATACCAAACAGCATTCTCCGAATGGGAAATGGCAGATGA    898

BSNT_05262       899 AGCCGTTTGATTTGATTGCTTTAAAAAAGACGATGACAAGGTGGCAGACC    948
                     ||||||||||...|||.||||||||||||||||||||.||||||||||||
BL00491___mal    899 AGCCGTTTGACCCGATCGCTTTAAAAAAGACGATGACGAGGTGGCAGACC    948

BSNT_05262       949 GGGTTAATGAATGTCGGCTGGAATACCCTGTATTTTGAGAACCATGACCA    998
                     |..|||||||||||||||||||||||.||.|||||.||.||.|||||.||
BL00491___mal    949 GCTTTAATGAATGTCGGCTGGAATACGCTTTATTTCGAAAATCATGATCA    998

BSNT_05262       999 GCCGAGGGTTATTTCCCGCTGGGGCAATGACGGGAAGCTCCGTAAGGAAT   1048
                     |||||||||.||.||||||||||||||||||.|..|||||||.||..|||
BL00491___mal    999 GCCGAGGGTCATATCCCGCTGGGGCAATGACCGCGAGCTCCGCAAACAAT   1048

BSNT_05262      1049 GTGCGAAGGCATTTGCAACGGTTCTGCACGGCATGAAAGGAACGCCGTTT   1098
                     |.||.||.|||||||||||.|||||||||||||||||.|||||.|||||.
BL00491___mal   1049 GCGCCAAAGCATTTGCAACAGTTCTGCACGGCATGAAGGGAACCCCGTTC   1098

BSNT_05262      1099 ATTTACCAGGGAGAAGAAATCGGCATGGTCAACATCGATATGCCGCTGGA   1148
                     |||||.||.||.|||||||||||||||...||||.|||.||||||||.||
BL00491___mal   1099 ATTTATCAAGGTGAAGAAATCGGCATGACAAACAGCGAGATGCCGCTCGA   1148

BSNT_05262      1149 GATGTATGATGATCTTGAAATAAAGAATGCATA-CGTGAACTAG------   1191
                     .||||||||||||||.|||||.||.||.||||| ||.|||||.|      
BL00491___mal   1149 AATGTATGATGATCTCGAAATCAAAAACGCATACCGCGAACTTGTCATTG   1198

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1199 AAAACAAAACGATGACAGAGGAAGACTTTCGAAAAGCCGTGGCGAAAAAA   1248

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1249 GGGCGGGATCATGCGAGAACGCCGATGCAATGGGATGACGGGAAATACGC   1298

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1299 GGGCTTTACGGATGGAGAGCCTTGGCTGGCGGTAAATCCCCGCTATCAAG   1348

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1349 AAATCAATGTGAAAGAGTCGCTTGCCGATGAAGATTCGATTTTCTATTAT   1398

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1399 TATCAGAAGCTCATCGGGCTGCGCAAACAAAATAAAGTCATCGTGTACGG   1448

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1449 AGACTATCGGCTGCTGCTCGAGGAAGATCCGCGAATCTTTGCGTATATCC   1498

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1499 GCGAATATCGGGGCGAAAAGCTGTTAGTCGCCGTGAATTTATCAGAAGAA   1548

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1549 AAGGCGCTGTTTCATGCTTCGCCGGAATTGCTTGAGGACAGATGGGATGT   1598

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1599 GCTGTTGTCAAACTACGCCCGAGAGCGGCTTAATATAAGCGGCAGTATCG   1648

BSNT_05262      1191 --------------------------------------------------   1191
                                                                       
BL00491___mal   1649 ACATGGAGCCTTATGAAGCTTTCATGATGATCAGCCGGGCAAAGGATTAC   1698

BSNT_05262      1191 ---------   1191
                              
BL00491___mal   1699 ACATCATGA   1707


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