Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05263 and BL00492

See Amino acid alignment / Visit BSNT_05263 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence dna-align/BSNT_05263___yvdK.1.5803.seq
#    -bsequence dna-align/BL00492___yvdK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05263___yvdK-BL00492___yvdK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05263___yvdK-BL00492___yvdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05263___yvdK
# 2: BL00492___yvdK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2321
# Identity:    1834/2321 (79.0%)
# Similarity:  1834/2321 (79.0%)
# Gaps:          85/2321 ( 3.7%)
# Score: 7255.5
# 
#
#=======================================

BSNT_05263___      1 ATGATAAATCAGCGGTTATTTGAGATTGATGAATGGAAAATCAAAACAAA     50
                     |||..||||||||||.||||||||||.||..|.|||||||||||||||||
BL00492___yvd      1 ATGGCAAATCAGCGGCTATTTGAGATCGACCAGTGGAAAATCAAAACAAA     50

BSNT_05263___     51 TACATTTAATAAGGAGCGTACACGGCTGCTGGAAAGCCTGACGTCTCTT-     99
                     .|.||||.|.|||||.|.||.||||||.|.||||||.|||||.|| ||| 
BL00492___yvd     51 CAAATTTGAAAAGGAACATAAACGGCTTCAGGAAAGTCTGACATC-CTTG     99

BSNT_05263___    100 GCCAATGGCTATATGGGGGTCAGAGGGAATTTTGAAGAAGGCTATTCAGG    149
                     ||.||.||.||||||||..||||.|||||||||||||||.||||||||||
BL00492___yvd    100 GCGAACGGATATATGGGAATCAGGGGGAATTTTGAAGAAAGCTATTCAGG    149

BSNT_05263___    150 CGACAGTCACCAAGGCACATATATTGCAGGCGTGTGGTTCCCCGACAAAA    199
                     |||.||||.|.|||||||||||||.|||||.||.||||||||.|||||||
BL00492___yvd    150 CGAAAGTCTCAAAGGCACATATATCGCAGGGGTTTGGTTCCCTGACAAAA    199

BSNT_05263___    200 CGCGAGTCGGCTGGTGGAAAAACGGGTATCCGGAATATTTCGGAAAAGTG    249
                     ||||.||||||||||||||||||||.|||||.|||||||||||.||||||
BL00492___yvd    200 CGCGTGTCGGCTGGTGGAAAAACGGCTATCCCGAATATTTCGGGAAAGTG    249

BSNT_05263___    250 ATCAATGCAATGAACTTTATGGGCATAGGCTTATATGTTGACGGTGAAAA    299
                     ||||||||.|||||.||.||.||.||.|...|||||||.||||..|||||
BL00492___yvd    250 ATCAATGCGATGAATTTCATCGGAATTGATGTATATGTAGACGACGAAAA    299

BSNT_05263___    300 AATCGATCTCCATCAAAACCCAATCAAATCATTTGAGGTAGAACTCAATA    349
                     |.||||.|||...||||||...|||.||||.|||||..|.||.||.||||
BL00492___yvd    300 AGTCGACCTCAGCCAAAACGACATCGAATCGTTTGAATTGGAGCTTAATA    349

BSNT_05263___    350 TGAAAGAGGGGATTCTGCGGCGAAGCGCTGTTGTCCGCATTCAGGGTAAA    399
                     |||||||.||.||..|||||.||||||||||.||||       |.||.||
BL00492___yvd    350 TGAAAGAAGGCATCTTGCGGAGAAGCGCTGTCGTCC-------GTGTGAA    392

BSNT_05263___    400 T-------CCGTCAGAATCAGGTCAGAGCGGTTTCTTAGCCTTGCTGTAA    442
                     |       |.||||.|||...|||.|||||.|||||||||||.|.|||..
BL00492___yvd    393 TCAAAAGGCTGTCAAAATTTCGTCCGAGCGCTTTCTTAGCCTCGATGTCC    442

BSNT_05263___    443 AAGAACTCTGTGCGATTCATTATGAAGCGGAGTGCTTGACGG--GAAATG    490
                     ...||||.||.|||||.||||||||||||||.|||.|||..|  |||  |
BL00492___yvd    443 CGCAACTGTGCGCGATCCATTATGAAGCGGAATGCCTGAGCGATGAA--G    490

BSNT_05263___    491 CTGTCATTACGCTTGTTCCTTACCTGGATGGAAACGTGGCAAATGAAGAT    540
                     |.|||||.||||||||||||||.||.||||||||.||.||||||||.|||
BL00492___yvd    491 CGGTCATCACGCTTGTTCCTTATCTTGATGGAAATGTCGCAAATGAGGAT    540

BSNT_05263___    541 TCTAACTACCAAGAACAGTTTTGGCAGGAGGAAGCGAAAGGTGCTGATTC    590
                     .|.||.|.|.||||.|.||||||||||||.|||||||||||.||.||.||
BL00492___yvd    541 GCCAATTTCGAAGAGCGGTTTTGGCAGGAAGAAGCGAAAGGCGCCGAATC    590

BSNT_05263___    591 TCACAGCGGCCATTTAGCGGCAAAAACGATCGAAAATCCATTTGGAACAC    640
                     |||..||||||||.|.|.|.|.||||||||.||.|||||.||||||||.|
BL00492___yvd    591 TCATCGCGGCCATCTTGTGACGAAAACGATTGAGAATCCGTTTGGAACCC    640

BSNT_05263___    641 CGCGCTTCACGGTATTAGCCGCAATG-GCAAACGAGACGGAGGGTTTTGT    689
                     ||||.||.|||||....||..|.||| || ||.|.||||||.||.|.|||
BL00492___yvd    641 CGCGTTTTACGGTGGCTGCTTCTATGTGC-AATGTGACGGAAGGATATGT    689

BSNT_05263___    690 CCATGAAAGC------TTTAAAACGACTGAAATGTATGTCGAGAATCGCT    733
                     |      |||      |||.|||||..||.||||||.|..||.||.||||
BL00492___yvd    690 C------AGCGAGCATTTTCAAACGGATGCAATGTACGCGGAAAACCGCT    733

BSNT_05263___    734 ACAGTTATCA------------AACGAAGGCATCATTGAAAAAGTTTGTG    771
                     ||.||||..|            |||.|||||.||.||.||.||.||..|.
BL00492___yvd    734 ACTGTTACGAAGTGGGACCGGGAACAAAGGCTTCTTTAAAGAAATTGATC    783

BSNT_05263___    772 ATTGTCACGACTTCCCGTGATTTTCGGGAGGAAGAGCTTTTATCGAAAGC    821
                     ||||||||.||.|||||.||||||...||.|.||||||||||....|.|.
BL00492___yvd    784 ATTGTCACAACGTCCCGGGATTTTGAAGAAGCAGAGCTTTTAGTACAGGG    833

BSNT_05263___    822 CAAGGAGCTTTTGGCGGATGT-----GGTAGAGAACGGCTATGAAGATGC    866
                     ||.||.|||||||||||||||     ||.||     ||.||||||||.||
BL00492___yvd    834 CAGGGCGCTTTTGGCGGATGTTCTTCGGCAG-----GGATATGAAGAAGC    878

BSNT_05263___    867 AAAACGGAGGCACACTGATCGATGGAAGGAAAGATGGGCAAAAGCGGACA    916
                     .||.||||||||.||.||.|..||||.||||||.||||||||||||||||
BL00492___yvd    879 GAAGCGGAGGCATACCGAACATTGGATGGAAAGGTGGGCAAAAGCGGACA    928

BSNT_05263___    917 TTGAGATTAAAGGAGATGAGGAGCTTCAACAAGGAATCCGCTACAATATC    966
                     ||||.||||||||.|||||.||||||||.||.||.|||||.|||||..||
BL00492___yvd    929 TTGAAATTAAAGGGGATGATGAGCTTCAGCAGGGCATCCGGTACAACCTC    978

BSNT_05263___    967 TTTCAGTTATTCTCGACATATTACGGGGGCGATGCCCGTTTGAATATCGG   1016
                     ||||||.|.|||||||||||.|||||.|.||||.|.||.||.||.|||||
BL00492___yvd    979 TTTCAGCTCTTCTCGACATACTACGGAGCCGATTCACGCTTAAACATCGG   1028

BSNT_05263___   1017 GCCGAAAGGATTTACTGGCGAGAAATATGGAGGTGCCGCATATTGGGATA   1066
                     |||||||||||||||.|||||||||||.|||||.|||||.||||||||||
BL00492___yvd   1029 GCCGAAAGGATTTACCGGCGAGAAATACGGAGGAGCCGCCTATTGGGATA   1078

BSNT_05263___   1067 CTGAGGCGTACGCCGTTCCGATGTATTTGGCGACAGCCGAGCCGGAGGTG   1116
                     ||||||||||||||||||||||||||||||||||.||.||||||||||||
BL00492___yvd   1079 CTGAGGCGTACGCCGTTCCGATGTATTTGGCGACGGCAGAGCCGGAGGTG   1128

BSNT_05263___   1117 ACGAAAAACCTGCTTTTGTATCGCTATCATCAGTTGGAGGCTGCCGAACG   1166
                     |||||.||.|||||||||||.|||||||||||.||||||||.||..||||
BL00492___yvd   1129 ACGAAGAATCTGCTTTTGTACCGCTATCATCATTTGGAGGCAGCAAAACG   1178

BSNT_05263___   1167 AAACGCGGCAAAATTGGGGATGAAGGGGGCACTTTATCCGATGGTGACGT   1216
                     .||.||.||.|||.|||||.||||.||.||.||||||||||||||.||.|
BL00492___yvd   1179 GAATGCCGCCAAACTGGGGCTGAAAGGAGCCCTTTATCCGATGGTCACCT   1228

BSNT_05263___   1217 TCACCGGTGATGAATGCCACAACGAATGGGAAATCACCTTTGAAGAAATT   1266
                     ||||.||.||||||||||||||.||||||||.||||||||.|||||||||
BL00492___yvd   1229 TCACAGGCGATGAATGCCACAATGAATGGGAGATCACCTTCGAAGAAATT   1278

BSNT_05263___   1267 CACCGCAATGGCGCGATCTGTTATGCGATCTACAATTATATCAATTATAC   1316
                     ||||||||.||||||||||||||||||||||||||||||.||||||||||
BL00492___yvd   1279 CACCGCAACGGCGCGATCTGTTATGCGATCTACAATTATGTCAATTATAC   1328

BSNT_05263___   1317 AGGCGACCGTAACTATATGGAAGAATACGGGATAGACGTACTTGTGGCAG   1366
                     |||||||||..||||.|||.|||||||||||||||||||.||.||.|.|.
BL00492___yvd   1329 AGGCGACCGGGACTACATGAAAGAATACGGGATAGACGTTCTCGTCGAAA   1378

BSNT_05263___   1367 TCAGCAGATTTTGGGCCGACCGTGTTCACTTCTCGAAACGAAAAAATAAG   1416
                     ||||||||||||||||.|||||.||.||||||||.||||||||.|||||.
BL00492___yvd   1379 TCAGCAGATTTTGGGCGGACCGCGTCCACTTCTCAAAACGAAACAATAAA   1428

BSNT_05263___   1417 TATATGATCCATGGCGTCACAGGGCCGAATGAATACGAAAACAACGTTAA   1466
                     ||.||||||||.|||||||||||||||||||||||.||||||||.||.||
BL00492___yvd   1429 TACATGATCCACGGCGTCACAGGGCCGAATGAATATGAAAACAATGTCAA   1478

BSNT_05263___   1467 CAACAATTGGTATACGAATGTCATTGCGGCTTGGACGTTGGAGTATACTC   1516
                     ||||||.|||||||||||..|.||||||.|.||||||.|.|||||.||.|
BL00492___yvd   1479 CAACAACTGGTATACGAACTTGATTGCGTCATGGACGCTTGAGTACACGC   1528

BSNT_05263___   1517 TACAAAGTCTCGAAAGTAT-CTCAGCGGAG---AAACGCCGCCTTCTGGA   1562
                     |..|||..||||   .||| ||| .|||||   ||||||||||..||.||
BL00492___yvd   1529 TCGAAAACCTCG---CTATCCTC-CCGGAGGAAAAACGCCGCCGGCTTGA   1574

BSNT_05263___   1563 TGTACAGGAAGAAGAATT---GAAAGTCTGGAGAGAAATCATCCAGCACA   1609
                     |||||.|||||..|||.|   ||||   ||||..||.||||||.|||..|
BL00492___yvd   1575 TGTACGGGAAGCCGAAATCGAGAAA---TGGAAGGATATCATCGAGCGAA   1621

BSNT_05263___   1610 TGTACTATCCGTATAGTGAAGAACTGCAAA--TTTTCGTTCAGCATGACA   1657
                     ||||||||||.||.|||||.|||.|  |||  ||||..||||||||||.|
BL00492___yvd   1622 TGTACTATCCATACAGTGAGGAATT--AAATGTTTTTATTCAGCATGATA   1669

BSNT_05263___   1658 CGTTCTTGGATAAAGACCTGCAAGCAGTTGACGAATTAGATCCAGCGGAA   1707
                     |.|||.||||||||||.||.||.||||..||.||..|.||.||.|..||.
BL00492___yvd   1670 CTTTCCTGGATAAAGAGCTTCAGGCAGCGGATGAGCTTGAACCGGGTGAC   1719

BSNT_05263___   1708 CGGCCTCTTTACCAGAATTGGTCATGGGACAAGATTCTCCGCTCCAATTT   1757
                     ||.||.||.||.|||||.|||||||||||.||.|||||||||||||.|||
BL00492___yvd   1720 CGTCCGCTCTATCAGAACTGGTCATGGGATAAAATTCTCCGCTCCAGTTT   1769

BSNT_05263___   1758 TATTAAGCAGGCAGATGTTCTCCAAGGCATTTATCTTTTTAATGACCGTT   1807
                     ||||||||||||.||||||||.||||||||||||.|.||||||.||||.|
BL00492___yvd   1770 TATTAAGCAGGCTGATGTTCTGCAAGGCATTTATTTCTTTAATCACCGAT   1819

BSNT_05263___   1808 TTACAATGGAAGAAAAACGGCGAAATTTTGAATTTTATGAGCCGATGACT   1857
                     |||||||||||||||||||.||.||.||||||||||||||.||||||||.
BL00492___yvd   1820 TTACAATGGAAGAAAAACGTCGCAACTTTGAATTTTATGAACCGATGACA   1869

BSNT_05263___   1858 GTCCATGAATCAAGCCTATCGCCCTCTGTCCATGCGATTCTCGCAGCCGA   1907
                     ||.||||||||.|||||.|||||.||||||||||||.|.||.||.||.||
BL00492___yvd   1870 GTTCATGAATCGAGCCTTTCGCCATCTGTCCATGCGGTGCTGGCGGCTGA   1919

BSNT_05263___   1908 ACTCAAGCTGGAAAAGAAAGCGCTCGAATTATATAAGCGCACAGCAAGGC   1957
                     .|||||..||||||||||||||||||||.|.||||||||.|||||.||||
BL00492___yvd   1920 GCTCAAAATGGAAAAGAAAGCGCTCGAACTGTATAAGCGTACAGCGAGGC   1969

BSNT_05263___   1958 TTGATCTTGATAATTACAATCATGATACGGAAGAA-GGCTTGCATATTAC   2006
                     |||||||.|||||||||||||||||.||.||.||| ||||| |||||.||
BL00492___yvd   1970 TTGATCTGGATAATTACAATCATGACACCGAGGAAGGGCTT-CATATCAC   2018

BSNT_05263___   2007 TTCAATGACGGGTAGCTGGCTGACAATCGTTCATGGCTTTGCAGGCATGC   2056
                     |||.|||||.||.||||||||..|.|||||.||.||.|||||.|||||||
BL00492___yvd   2019 TTCGATGACCGGAAGCTGGCTCGCCATCGTGCAAGGATTTGCCGGCATGC   2068

BSNT_05263___   2057 GCACCGCGAATGAGACGCTGTCATTTGCTCCGTTTTTGCCGAAAGAATGG   2106
                     ||||...|.||||||.||||||.||||||||||||.|||||||.||||||
BL00492___yvd   2069 GCACTCAGGATGAGAAGCTGTCTTTTGCTCCGTTTCTGCCGAAGGAATGG   2118

BSNT_05263___   2107 GACGAATATTCATTCAACATCAATTATCGAAACCGATTAATCAATGTGAC   2156
                     ||||..|||||.||||||||||||||||||.||||..|||||||||||..
BL00492___yvd   2119 GACGGTTATTCGTTCAACATCAATTATCGAGACCGGCTAATCAATGTGCA   2168

BSNT_05263___   2157 GGTTGACGAAAAGCGCGTTATTTTTGAG-CTTGTAAAAGGCGAGCCGCTG   2205
                     |||.||.|||||..||| |..||||.|| |||.|||||||.||.|||||.
BL00492___yvd   2169 GGTAGAGGAAAACAGCG-TCGTTTTCAGTCTTTTAAAAGGAGAACCGCTT   2217

BSNT_05263___   2206 CACATGAACGTTTATGAGGAACCAG-TTGTCCTACAGGGACGATGTGAAA   2254
                     ...||||..|||||||..||| ||| |.|..||..|.|||||.|.|||||
BL00492___yvd   2218 TCTATGACAGTTTATGGAGAA-CAGATCGCACTGAACGGACGGTATGAAA   2266

BSNT_05263___   2255 GGA-GAACGCCTAATGAGTGA   2274
                     ||| ||..|||..||||    
BL00492___yvd   2267 GGAGGATGGCCCGATGA----   2283


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.