Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00091 and BL00517
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:45
# Commandline: needle
# -asequence dna-align/BSNT_00091___spoVC.1.5803.seq
# -bsequence dna-align/BL00517___spoVC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00091___spoVC-BL00517___spoVC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00091___spoVC-BL00517___spoVC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00091___spoVC
# 2: BL00517___spoVC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 580
# Identity: 450/580 (77.6%)
# Similarity: 450/580 (77.6%)
# Gaps: 26/580 ( 4.5%)
# Score: 1688.0
#
#
#=======================================
BSNT_00091___ 1 ATGCTTGTGATTGCCGGTCTCGGAAACCCGGGGAAGAAC-TATGAAAATA 49
|||||||||.||||.||..|.||.||.|||||.|| ||| ||||||||||
BL00517___spo 1 ATGCTTGTGTTTGCAGGATTGGGCAATCCGGGTAA-AACATATGAAAATA 49
BSNT_00091___ 50 CACGGCATAATGTCGGATTTATGGTGATAGATCAGCTTGCAAAGGAATGG 99
|..|.||.|||||.||.||||||..|||.||..||||..|.||.||.|||
BL00517___spo 50 CGAGACACAATGTAGGTTTTATGACGATTGACGAGCTCTCGAAAGAGTGG 99
BSNT_00091___ 100 AATATAGAGCTGAATCAAAATAAA-TTTAACGGATTATACGGAACCGGAT 148
||.||...|||..|| ||||.||| ||.||||||..||||||||.|||.|
BL00517___spo 100 AACATTCCGCTTGAT-AAAACAAAGTTCAACGGACAATACGGAATCGGGT 148
BSNT_00091___ 149 TTGTTTCCGGCAAAAAGGTTCTACTTGTTAAACCGCTTACATATATGAAT 198
|||||||||||||||||||||||||||||||.||||||||||||||||||
BL00517___spo 149 TTGTTTCCGGCAAAAAGGTTCTACTTGTTAAGCCGCTTACATATATGAAT 198
BSNT_00091___ 199 TTATCAGGAGAATGTTTGCGGC--CTTTAATGGACTACTATGA------T 240
|||||.||||||||||||.||| |||| |||||||.||.|| |
BL00517___spo 199 TTATCGGGAGAATGTTTGAGGCCGCTTT--TGGACTATTACGAGATCCCT 246
BSNT_00091___ 241 GTCGATAACGAAGATTTGACAGTCATTTACGACGACCTTGACCTTCCTAC 290
||.||.| ||||||.|||.||||||||.||..|.||.|||||.||
BL00517___spo 247 GTTGACA------ATTTGAAAGTGATTTACGATGATTTGGATCTTCCGAC 290
BSNT_00091___ 291 TGGCAAG-ATCCGTTTAAGAACGAAAGGAAGCGCCGGAGGGCACAATGGC 339
.|| ||| ||||||.|.||.||||||||||||||.|||||.||.||.|||
BL00517___spo 291 CGG-AAGAATCCGTCTGAGGACGAAAGGAAGCGCAGGAGGCCATAACGGC 339
BSNT_00091___ 340 ATCAAATC-ACTGATCCAGCATCTTGGTACATCCGAGTTTGACCGTATCC 388
|||||||| || |||.||||||||.||.|||...||||||.||||.|||.
BL00517___spo 340 ATCAAATCGAC-GATTCAGCATCTGGGAACAAGTGAGTTTAACCGGATCA 388
BSNT_00091___ 389 GCATCGGAATCGGCAGGCCTGTAAACGGCATGAAGGTCGTTGATTATGTG 438
|.||||||||.|||.|.||.||||||||||||||.|||||.|||||||||
BL00517___spo 389 GAATCGGAATAGGCCGTCCGGTAAACGGCATGAAAGTCGTCGATTATGTG 438
BSNT_00091___ 439 TTAGGCTCCTTTACCAAGGAGGAGGCACCTGAGATCGAAGAAGCGGT-TG 487
.|.|||.|.|||||..|.||.||.|..||.|.|||..||||.||.|| .|
BL00517___spo 439 CTTGGCGCTTTTACAGATGAAGAAGAGCCGGCGATAAAAGAGGCCGTCAG 488
BSNT_00091___ 488 ATAAATCTGTGAAGGCTTGTGAGGCTTCTTTGAGTAAACCGTTTTTAGAA 537
| .||||.|..|||||.|||||.|||||||||...|||||.|||||||||
BL00517___spo 489 A-CAATCGGCCAAGGCCTGTGAAGCTTCTTTGGAAAAACCTTTTTTAGAA 537
BSNT_00091___ 538 GTCATGAACGAATTTAACGCAAAGGTATAA 567
||||||||.|||||||||||||||||||||
BL00517___spo 538 GTCATGAATGAATTTAACGCAAAGGTATAA 567
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