Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00082 and BL00525

See Amino acid alignment / Visit BSNT_00082 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:44
# Commandline: needle
#    -asequence dna-align/BSNT_00082___ispE.1.5803.seq
#    -bsequence dna-align/BL00525___ipk.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00082___ispE-BL00525___ipk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00082___ispE-BL00525___ipk.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00082___ispE
# 2: BL00525___ipk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 895
# Identity:     674/895 (75.3%)
# Similarity:   674/895 (75.3%)
# Gaps:          41/895 ( 4.6%)
# Score: 2510.5
# 
#
#=======================================

BSNT_00082___      1 GTGAAAGCTATGCGTATTTTAGAAAAAGCGCCAGCTAAGATCAATCTGTC     50
                              .|||||||||||||.||.|||||.|||||.||.|||.||||
BL00525___ipk      1 ---------TTGCGTATTTTAGAGAAGGCGCCGGCTAAAATTAATTTGTC     41

BSNT_00082___     51 ACTTGACGT----CACCCGAAAACGCCCGGATGGCTATCATGAAGTCGAA     96
                     .||.|||||    |||    |||||.||.|||||.|||||||||||.||.
BL00525___ipk     42 GCTCGACGTTCGCCAC----AAACGTCCAGATGGGTATCATGAAGTAGAG     87

BSNT_00082___     97 ATGATCATGACGACAATTGATTTAGCTGATCGAATTGAATTGACGGAGCT    146
                     |||.||||||||||.||||||||.||.|||||..|.|||||.||.|||||
BL00525___ipk     88 ATGGTCATGACGACGATTGATTTGGCGGATCGGGTCGAATTAACAGAGCT    137

BSNT_00082___    147 TGCAGAGGATGAAGTGAGGGTTTCCTCCCACAACCGATTTGTGCCTGATG    196
                     .|||||.|||.||||.|.||||||.||.||.|||||.|||||.||.||.|
BL00525___ipk    138 GGCAGAAGATAAAGTAACGGTTTCTTCGCATAACCGCTTTGTTCCCGACG    187

BSNT_00082___    197 ACCAAAGAAACTTAGCTTATCAGGCTGCCAAGCTGATCAAGGACAGATAC    246
                     |.||..|||||.|.||||||||||||||.|.|||.||.||.||..|.|||
BL00525___ipk    188 ATCAGCGAAACCTTGCTTATCAGGCTGCAATGCTCATGAAAGAACGCTAC    237

BSNT_00082___    247 AACGTGAAAAAGGGAGTTTCCATCATGATTACGAAGGTAATTCCGGTGGC    296
                     ..|.|.|||||.||.||||||||..|.||||||||.||.|||||.||.||
BL00525___ipk    238 GGCATTAAAAAAGGGGTTTCCATTTTTATTACGAAAGTGATTCCCGTTGC    287

BSNT_00082___    297 TGCCGGTCTTGCCGGCGGGAGCAGTGATGCGGCGGCGACG--CTCAGAGG    344
                     |||.||.|||||.||.||.|||||.||||||||.||  ||  .|||||||
BL00525___ipk    288 TGCGGGCCTTGCAGGAGGAAGCAGCGATGCGGCTGC--CGTCTTCAGAGG    335

BSNT_00082___    345 GCTGAACAGACTGTGGAATTTAAATCTGTCTGCGGA--AACG--CTTGCT    390
                     ..|||||.|.||||||.||||.||.||.||    ||  ||.|  ||.|||
BL00525___ipk    336 ATTGAACCGGCTGTGGGATTTGAAGCTTTC----GATGAATGAACTGGCT    381

BSNT_00082___    391 GAGCTTGGAGCGGAAATTGGCTCTGACGTTTCATTTTGTGTCTATGGCGG    440
                     ||||||||.||.||.||.||.|||||.||.||.|||||.||..||||.||
BL00525___ipk    382 GAGCTTGGCGCTGAGATCGGATCTGATGTCTCCTTTTGCGTACATGGAGG    431

BSNT_00082___    441 AACTGCATTAGCAACAGGGCGCGGCGAGAAAATTAAACATATC-AGCACG    489
                     |||.||..|.|||||.||..|.||.||||||||....|||||| || ||.
BL00525___ipk    432 AACGGCTCTTGCAACGGGAAGGGGAGAGAAAATCCGTCATATCGAG-ACT    480

BSNT_00082___    490 CCTCCGCACTGCTGGGTCATTTTAGCGAAGCCGACTATCGGTGTTTCAAC    539
                     ||.||||||||||||||..|..|.||.||||||||.|||||.||.|||||
BL00525___ipk    481 CCGCCGCACTGCTGGGTAGTGCTGGCAAAGCCGACGATCGGCGTATCAAC    530

BSNT_00082___    540 TGCTGAAGTGTACAGAGC-GCTGAAACTGGATGGTATAGAGCATCCCGAT    588
                     |||.|||||||||| ||| |||||||.|.||.|..||.||.|||||.|||
BL00525___ipk    531 TGCAGAAGTGTACA-AGCAGCTGAAAGTCGACGAGATTGAACATCCGGAT    579

BSNT_00082___    589 GTACAAGGAATGATCGAGGCGATAGAAGAAAAGAGTTTTCAGGAGATGTG    638
                     ||.|||||.|||||.|..|||||.|||||.||||.||||||..|.|||||
BL00525___ipk    580 GTTCAAGGTATGATTGCTGCGATTGAAGAGAAGAATTTTCAAAAAATGTG    629

BSNT_00082___    639 ----CAGCCGTTTAGGCAATGTGCTTGAATCTGTTACGCTCGATATGCAT    684
                         .|||    |.||||||||.||.|||||||||||..|..|.|||||.
BL00525___ipk    630 TGACAAGC----TCGGCAATGTACTCGAATCTGTTACATTGAACATGCAC    675

BSNT_00082___    685 CCTGAAGTTGCAATGATCAAAAACCAGATGAAACGCTTTGGTGCAGATGC    734
                     ||.|||||.||.|||||||||||.||.|||||.||.||.||.||.|||||
BL00525___ipk    676 CCCGAAGTCGCGATGATCAAAAATCAAATGAAGCGGTTCGGCGCCGATGC    725

BSNT_00082___    735 CGTGTTAATGAGCGGGAGCGGCCCGACAGTGTTTGGACTGGTTCAGTATG    784
                     .|||.|.|||||||||||||||||.||.|||||.|||||.|||||.||.|
BL00525___ipk    726 TGTGCTGATGAGCGGGAGCGGCCCCACTGTGTTCGGACTTGTTCAATACG    775

BSNT_00082___    785 AGTCGAAGGTGCAGAGAATTTATAACGGGTTAAGAGGCTTCTGCGATCAA    834
                     |.||.||.|||||.|||||.||||||||.||||||||.||.||||||||.
BL00525___ipk    776 AATCAAAAGTGCAAAGAATCTATAACGGATTAAGAGGGTTTTGCGATCAG    825

BSNT_00082___    835 GTTTATGCGGTGAGAATGATCGGCGAACAGAACGCTCTTGATTAA    879
                     ||||||||||||.|.||||||||.|||||.||.|..|||||||||
BL00525___ipk    826 GTTTATGCGGTGCGGATGATCGGAGAACAAAATGAACTTGATTAA    870


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00082 and BL00525

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
