Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02389 and BL00554
See
Amino acid alignment /
Visit
BSNT_02389 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence dna-align/BSNT_02389___moaE.1.5803.seq
# -bsequence dna-align/BL00554___moaE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02389___moaE-BL00554___moaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02389___moaE-BL00554___moaE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02389___moaE
# 2: BL00554___moaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 502
# Identity: 343/502 (68.3%)
# Similarity: 343/502 (68.3%)
# Gaps: 35/502 ( 7.0%)
# Score: 1097.0
#
#
#=======================================
BSNT_02389___ 1 ATG---GAACGGTTTGAGATTACGAAAACACCC-ATTAATACTGAAAACA 46
.|| |||||.|||...||.|| ||||.|||| |||...|..|||.|..
BL00554___moa 1 TTGTCTGAACGATTTATCATAAC-AAAAGACCCGATTGTCATCGAAGATG 49
BSNT_02389___ 47 TCATCAAAAAAGTGGAGAAACGGGAAGCAGGAGCCATTACAACATTTATT 96
||.||||||||||.||.|.|.|||||||.||.|||.|.||.||.|||||.
BL00554___moa 50 TCGTCAAAAAAGTTGAAAGAAGGGAAGCCGGTGCCGTCACGACGTTTATC 99
BSNT_02389___ 97 GGTACGGTTCGGGAATGGACAAACGGAAAAAGAACGGTTCGGCTTGAATA 146
||.||.||..|.||||||||.||||||||||..||..|....||.|||||
BL00554___moa 100 GGAACAGTGAGAGAATGGACCAACGGAAAAAAGACCCTCTATCTCGAATA 149
BSNT_02389___ 147 TGAGGCATATGAACCGATGGCCGT--GCAAATGCTTGCTCAAATCGGCGC 194
|||.||.||||..||.|||||.|| || |||||.|||||.||||||..
BL00554___moa 150 TGAAGCTTATGTTCCAATGGCGGTCAGC--ATGCTCGCTCAGATCGGCAA 197
BSNT_02389___ 195 TGAAATCGAAGAAAAATGGGAAGGTGCCTCAGCT---GCGATCACGCACC 241
.||||||.|.|||||||||...|| |.||||| ||.||.||.||.|
BL00554___moa 198 AGAAATCAATGAAAAATGGCCCGG---CACAGCTGCAGCCATTACCCATC 244
BSNT_02389___ 242 GTATAGGTGTGCTCGATATCGGTGAAGCAGCGGTAGTGATTGCTGTATCT 291
|.||.||...|||.||.||...|||.||.||.||.||.||.||.||.||.
BL00554___moa 245 GCATCGGCAGGCTGGACATTTCTGACGCGGCCGTTGTCATCGCCGTGTCG 294
BSNT_02389___ 292 TCTCCCCATCGAAAAGCCGCATATGAAGCCAATGAGTATGCGATTGAACG 341
||.||.||.||.|||||.||.||||||||.|||||.|||||.||.|||.|
BL00554___moa 295 TCGCCTCACCGGAAAGCGGCGTATGAAGCGAATGAATATGCTATCGAAAG 344
BSNT_02389___ 342 CATTAAACAGATTGTGCCGATTTGGAAAAAAGAAATTTGGGAAGACGGTG 391
.||.||.||.||.||.||||||||||||||||||..||||||.|||||.|
BL00554___moa 345 AATAAAGCAAATCGTCCCGATTTGGAAAAAAGAACATTGGGAGGACGGCG 394
BSNT_02389___ 392 AGCAATGGATCGGCGACCAGCTAGAAACAACAGCTTATCCGAACGGAAAA 441
||...|||||||||||||||||.||.|||||.|..||.|||.|.||.|||
BL00554___moa 395 AGACTTGGATCGGCGACCAGCTTGAGACAACTGAATACCCGGAAGGGAAA 444
BSNT_02389___ 442 CCAGACCT--AAG--------------CGAGGGAGAGCAGCATG---ATT 472
||.||..| ||| .|||..||||..|| || |||
BL00554___moa 445 CCGGATATTGAAGAGGCGGCTTCCGGCAGAGAAAGAGGTGC-TGACCATT 493
BSNT_02389___ 473 AA 474
.|
BL00554___moa 494 GA 495
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.