Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02387 and BL00555

See Amino acid alignment / Visit BSNT_02387 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence dna-align/BSNT_02387___mobB.1.5803.seq
#    -bsequence dna-align/BL00555___mobB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02387___mobB-BL00555___mobB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02387___mobB-BL00555___mobB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02387___mobB
# 2: BL00555___mobB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 601
# Identity:     341/601 (56.7%)
# Similarity:   341/601 (56.7%)
# Gaps:         152/601 (25.3%)
# Score: 905.5
# 
#
#=======================================

BSNT_02387___      1 ATGGCCTTGGTCCG-TCCTTTCCCGATCGTCCAAGTTGTAGGATTTCAAA     49
                           .||| ||| .|.|||.||.|||.||||..|.|||||.|..||||
BL00555___mob      1 ------GTGG-CCGCACATTTTCCAATCCTCCAGATCGTAGGGTACCAAA     43

BSNT_02387___     50 ACAGCGGGAAAACAACGTTTATTGAGCGCATTCTTGAAAAA---GC----     92
                     |||||||.|||||.|||||       ||     ||||||||   ||    
BL00555___mob     44 ACAGCGGCAAAACGACGTT-------CG-----TTGAAAAATTGGCGGGA     81

BSNT_02387___     93 ---CTCTGAACAG---GGAGTCCATTTGGGCTGCCTGAAGCATCATGGTC    136
                        ||| ||.|||   ||||||.||.|.|||||.|||||.||.||.||.|
BL00555___mob     82 AAGCTC-GATCAGCTAGGAGTCAATGTTGGCTGTCTGAAACACCACGGAC    130

BSNT_02387___    137 ACGGCGGTGAACCGCAAACGC--TCACGGAAGGAAAAGACACGGACCG--    182
                     |.||.||.||||||  .||||  |..|.|||||.||.||..|.|||||  
BL00555___mob    131 ATGGAGGAGAACCG--GACGCTTTTGCCGAAGGGAAGGATTCCGACCGCT    178

BSNT_02387___    183 --TTACAAGGCGGCAGGTGCTGATGTAACAGCAGTAGAAGGTGCTGGTGT    230
                       ||.|    .|||.||.||.|.||...|.|..|||||||||||.||.||
BL00555___mob    179 TTTTTC----GGGCTGGAGCGGCTGCGTCCGGCGTAGAAGGTGCGGGCGT    224

BSNT_02387___    231 GTTACAGCTGACTGCCCGCCGCAATTGG------GAT-------TTGGC-    266
                     .||.|||||.||.||.|||.||.|.|||      |||       |||.| 
BL00555___mob    225 TTTTCAGCTTACGGCGCGCGGCGAGTGGACGCTTGATCAACTGATTGCCG    274

BSNT_02387___    267 ---ACGGCTGATTGAGTTATACCAATTTCTCGAAACAGACTGTCTTCTGA    313
                        |||||       |||.||.||.||          ||.|||||.||.|
BL00555___mob    275 CTTACGGC-------GTTTTAGCAGTT----------GAGTGTCTCCTCA    307

BSNT_02387___    314 TTGAAGGCTTTAAAAAAGCCTCTTATCCTAAAGTGGTTATCCTAAGTGAA    363
                     |.|||||.||||||.|.||..|.||||..|||||.||.||..|.||   |
BL00555___mob    308 TCGAAGGATTTAAACATGCGCCATATCAAAAAGTTGTCATGGTCAG---A    354

BSNT_02387___    364 AAGGAAGATCTGGAAGCGCTGCAAGC------AGTAAAT-------ATAA    400
                     ||.||||   .|||    ||||..||      ||.||.|       ||.|
BL00555___mob    355 AACGAAG---CGGA----CTGCCGGCTCCTGAAGGAATTGGACGGCATCA    397

BSNT_02387___    401 TCGCCATCATCTA-TAGAAAAAAAGAGCATATGACAGAGC----ATCAGG    445
                     |||||.||||.|| .||     .|||||        ||||    |.||  
BL00555___mob    398 TCGCCGTCATTTACCAG-----CAGAGC--------GAGCCGAAAACA--    432

BSNT_02387___    446 GATTACCCGTT------TTTCATGCGGATGATCCGGTTGCCGTGGACTTT    489
                     |||     |||      ||||||...||.||.||||.||||.|||..|||
BL00555___mob    433 GAT-----GTTCCATCCTTTCATATTGAAGACCCGGGTGCCCTGGCTTTT    477

BSNT_02387___    490 GTGCTTTCACAGCTGAAGGGGGAA--------TCTG----------CATA    521
                     .|.||....||.||.||||.||||        ||||          ||||
BL00555___mob    478 ATTCTGAATCATCTAAAGGAGGAAGGCGTTTGTCTGAACGATTTATCATA    527

BSNT_02387___    522 A    522
                     |
BL00555___mob    528 A    528


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