Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02381 and BL00558
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence dna-align/BSNT_02381___mobA.1.5803.seq
# -bsequence dna-align/BL00558___mobA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02381___mobA-BL00558___mobA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02381___mobA-BL00558___mobA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02381___mobA
# 2: BL00558___mobA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 638
# Identity: 389/638 (61.0%)
# Similarity: 389/638 (61.0%)
# Gaps: 88/638 (13.8%)
# Score: 896.0
#
#
#=======================================
BSNT_02381___ 1 ATGAAGCATGTAAACGTACTGTTGGCAGGGGGAGC-CTCACGTCGCTTTG 49
|||||..|..||.|.||..|.||..||||||| || .||.||.||.||||
BL00558___mob 1 ATGAAAGAAATACATGTCATATTATCAGGGGG-GCTTTCGCGCCGTTTTG 49
BSNT_02381___ 50 GAGAACCGAAGGCGTTTGTCAAATGGAAGGGCAGGATGCTTTACGAAT-G 98
|.||||||||||||||||.|...|||||.||||.|..||||||..||| |
BL00558___mob 50 GGGAACCGAAGGCGTTTGCCCGCTGGAAAGGCAAGCCGCTTTATCAATGG 99
BSNT_02381___ 99 CGCTAAAGAGGCACTTGGAGA--ACAAACGGTTATCATCAGCCGTCCCGA 146
.|| |||.||||.||.||||| ||...|.|.||| |.||||||||.|.
BL00558___mob 100 TGC-AAACAGGCGCTGGGAGACGACGTCCTGATAT--TGAGCCGTCCGGG 146
BSNT_02381___ 147 ATTTATTGATAGATTTCAAGAAAACGGTGAAAATGAAGTGTATCAAGATG 196
.||.|..||..|.|||..||||..|||.|||||.|..|||....|||||.
BL00558___mob 147 CTTGACGGAGCGGTTTATAGAACTCGGGGAAAAAGCGGTGCTGGAAGATA 196
BSNT_02381___ 197 CTGAGCCATTTCA-AGGCATGGGGCCATTGGCTGGTATATATACCGCTTT 245
..||.|| .|.|| |||.|..|||||..|.||.|||||.||.||.||..|
BL00558___mob 197 TCGAACC-GTACAGAGGGAAAGGGCCGCTTGCCGGTATGTACACAGCCAT 245
BSNT_02381___ 246 TAAAAAGACAGACGGTGATCTTTATACTGTTCTTT---CCTGTGACACAC 292
..|...|.|.||.||.||....|||| ||.||| ||||||||||.|
BL00558___mob 246 GGAGCGGGCGGAAGGGGAATGCTATA---TTTTTTCGGCCTGTGACACCC 292
BSNT_02381___ 293 CGCTGATACAAAGAAG--GACGAT----GCTGGAGCTCAAACGTCTGATG 336
||||..|.| .|.|| |||.|| ||| .|.|||||.|.|.||
BL00558___mob 293 CGCTTGTCC--GGCAGGAGACCATATCGGCT----TTAAAACGGCAGTTG 336
BSNT_02381___ 337 ACTGCCGGTGCG---GACGCGGTAGTCCCAATTTCAGACGGACAAGTGCA 383
|| ||.| ||| |||||.||.||.||..|..||||||||...|.|||
BL00558___mob 337 AC--CCCG-GCGGATGACGCCGTCGTGCCTGTCGCAGACGGAAGGGCGCA 383
BSNT_02381___ 384 GCC-ATTGATTGCGATTTACCAC--AAACGTATCATGCCAGTTCTATACG 430
||| .||| ||||..|.|||||| ||..|||..|| |.||.||..|.|
BL00558___mob 384 GCCGCTTG-TTGCCGTCTACCACAGAAGGGTAAAAT--CCGTCCTCCATG 430
BSNT_02381___ 431 ATCAGCTTTCTG-AGAA-GAGGTTGAGAATATCAG--ATTTATTAGGCAG 476
|.|||| |||.| |||| ||..| |||.||||| .|||..|.|.|.|
BL00558___mob 431 AACAGC-TTCAGCAGAACGAACT---GAAGATCAGCAGTTTTCTCGACCG 476
BSNT_02381___ 477 AATTTCGGTTTGTTACGTACAGGCTGA---AAAT---ATCGGAGCAAACC 520
.| |||| .||.|.||||| .||| |.|| .|.||.|||.|.|
BL00558___mob 477 CA-TTCG---CGTCAAGTACA--TTGAAGCAGATGCGGTTGGTGCAGAGC 520
BSNT_02381___ 521 CGGCAGAGTTTATCAACATTAATACA----CGTGATGATTTTAGCTGTTT 566
||...||.|||||.||..|.||||.| || |||||
BL00558___mob 521 CGTGGGAATTTATAAATGTCAATAAAAAGTCG----GATTT--------- 557
BSNT_02381___ 567 GGAAGAA-AAATCGAAC---TCCCTCAAGCGGGACTGA 600
|||| ||||.||.| ||..|| ||||| |||
BL00558___mob 558 ---AGAAGAAATAGAGCCGTTCTTTC---CGGGA-TGA 588
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