Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04107 and BL00613

See Amino acid alignment / Visit BSNT_04107 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:11
# Commandline: needle
#    -asequence dna-align/BSNT_04107___leuC.1.5803.seq
#    -bsequence dna-align/BL00613___leuC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04107___leuC-BL00613___leuC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04107___leuC-BL00613___leuC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04107___leuC
# 2: BL00613___leuC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1430
# Identity:    1122/1430 (78.5%)
# Similarity:  1122/1430 (78.5%)
# Gaps:          22/1430 ( 1.5%)
# Score: 4350.5
# 
#
#=======================================

BSNT_04107___      1 ATGATGCCTCGAACAATCATCGAAAAGATTTGGGATCAGCATATTGTAAA     50
                     ||||||||||||||.|||||||||||.|||||||||||.||..|..|.||
BL00613___leu      1 ATGATGCCTCGAACGATCATCGAAAAAATTTGGGATCAACACGTGATTAA     50

BSNT_04107___     51 ACATGGTGAGGGAAAGCCGGATCTTCTCTATATTGATTTGCACCTCATTC    100
                     |.|.|||||.||.|||||.||.|||||||||||.|||.||||.||.||.|
BL00613___leu     51 AAAAGGTGAAGGGAAGCCTGACCTTCTCTATATCGATCTGCATCTGATAC    100

BSNT_04107___    101 ATGAGGTGACGTCTCCTCAGGCATTTGAAGGCTTGAGACAAAAGGGAAGA    150
                     |||||||.|||||.||||||||.|||||||||.||||.||||||...|||
BL00613___leu    101 ATGAGGTAACGTCGCCTCAGGCCTTTGAAGGCCTGAGGCAAAAGAACAGA    150

BSNT_04107___    151 AAGGTCAGAAGACCCCAAAACACATTTGCGACAATGGACCACAACATCCC    200
                     ||.||||||.|.||.|||||.||.|||||.||.||||||||||||||.||
BL00613___leu    151 AAAGTCAGACGGCCTCAAAATACGTTTGCCACGATGGACCACAACATTCC    200

BSNT_04107___    201 GACTGTCAATCGTTTTGAGATAAAGGATGAAGTTGCGAAACGCCAGGTAA    250
                     ||||||||||||.||||||||.||.|||||.||.||.|||||.|||||.|
BL00613___leu    201 GACTGTCAATCGGTTTGAGATTAAAGATGATGTCGCTAAACGGCAGGTCA    250

BSNT_04107___    251 CGGCGCTTGAAAGAAACTGTGAGGAATTTGGCGTGCGCCTTGCCGATCT-    299
                     ..|||||.|||.|.||.||.||.|||||.|||.|.||||||||.|| || 
BL00613___leu    251 GTGCGCTCGAACGGAATTGCGAAGAATTCGGCATCCGCCTTGCAGA-CTT    299

BSNT_04107___    300 -TCACAGTGTGGATCAAGGGATTGTCCATGTCGTCGGACCTGAACTGGGC    348
                      ||| ||.||.||.||.|||||.|||||||||.||||.|||||||||||.
BL00613___leu    300 GTCA-AGCGTAGACCAGGGGATCGTCCATGTCATCGGGCCTGAACTGGGA    348

BSNT_04107___    349 TTAACGCTTCCAGGGAAAACGATTGTGTGCGGGGACAGTCATACATCAAC    398
                     ||.|||||.||.||.||||||||.||.|||||.|||||.||||||||.||
BL00613___leu    349 TTGACGCTCCCGGGCAAAACGATCGTTTGCGGAGACAGCCATACATCCAC    398

BSNT_04107___    399 ACATGGTGCTTTCGGCGCTCTTGCATTTGGGATCGGGACGAGTGAAGTTG    448
                     |||.||.||.||.|||||.||.||.||.||.|||||.|||||.|||||.|
BL00613___leu    399 ACACGGAGCGTTTGGCGCGCTCGCTTTCGGAATCGGAACGAGCGAAGTCG    448

BSNT_04107___    449 AACATGTCCTTTCCACACAGACACTTTGGCAGCAGCGTCCAAAAACACTT    498
                     ||||.|||.|.||.||.|||||.|||||||||||....||.||.||.||.
BL00613___leu    449 AACACGTCTTGTCAACGCAGACGCTTTGGCAGCAAAAACCGAAGACGCTG    498

BSNT_04107___    499 GAAGTGCGCGTAGATGGAACGCTTCAAAAAGGGGTAACGGCAAAGGATGT    548
                     |||.|.|||||.||.||.|..||.||||||||.||.|||||.||.||.||
BL00613___leu    499 GAAATCCGCGTTGACGGCAAACTGCAAAAAGGAGTGACGGCTAAAGACGT    548

BSNT_04107___    549 CATCCTTGCTGTCATCGGCAAATACGGTGTGAAATTCGGCACAGGCTACG    598
                     |||.||.||..|||||||.||||||||.||.||||||||..|.|||||.|
BL00613___leu    549 CATTCTGGCGATCATCGGAAAATACGGGGTTAAATTCGGTGCGGGCTATG    598

BSNT_04107___    599 TCATTGAATACACTGGGGAAGTATTCAGAAATATGACGATGGATGAACGA    648
                     ||||||||||.||.||.|||||.|||.||||.|||.|||||||.|||||.
BL00613___leu    599 TCATTGAATATACCGGCGAAGTGTTCCGAAACATGTCGATGGACGAACGG    648

BSNT_04107___    649 ATGACTGTTTGTAACATGTCAATTGAAGCAGGAGCAAGAGCAGGTTTGAT    698
                     |||||.|||||.|||||||||||.|||||.||.||||||||.||.|||||
BL00613___leu    649 ATGACGGTTTGCAACATGTCAATCGAAGCTGGGGCAAGAGCTGGATTGAT    698

BSNT_04107___    699 TGCACCTGACGAGGTGACGTTTGAATATTGCAAAAATCGC----AAGTAC    744
                     ||||||.||.|||..|||||||||||||..|||||    |    ||.||.
BL00613___leu    699 TGCACCGGATGAGACGACGTTTGAATATGTCAAAA----CAAAAAAATAT    744

BSNT_04107___    745 ACGCCAAAAGGCGAAGAATTTGACAAGGCCGTAGAGGAATGGAAGGCGCT    794
                     .|||||||||||||.||.|||||.||.||.|||||.|||||||||...||
BL00613___leu    745 GCGCCAAAAGGCGAGGATTTTGAGAAAGCTGTAGAAGAATGGAAGAACCT    794

BSNT_04107___    795 GCGCACAGACCCGGGCGCTGTTTACGATAAATCTATCGTCCTTGACGGCA    844
                     |...||.||.|||||.||.||.|||||.....|.|||||..|.|||||.|
BL00613___leu    795 GAAAACCGATCCGGGGGCGGTCTACGACCGGACGATCGTGATGGACGGAA    844

BSNT_04107___    845 ACAAAATTTCCCCTATGGTGACATGGGGCATTAACCCTGGAATGGTTCTT    894
                     .|...|||||.||.||||||||.||||||||.||||||||.|||||.||.
BL00613___leu    845 GCGCCATTTCTCCGATGGTGACGTGGGGCATCAACCCTGGCATGGTGCTG    894

BSNT_04107___    895 CCTGTCGATTCTGAA---GTTCCTGCGCCGGAAAGCTTTTCTGCA-GAAG    940
                     ||.||.||   ||||   .||||.|.|||.| |.|||||..|||| ||||
BL00613___leu    895 CCGGTTGA---TGAAACGATTCCGGGGCCTG-AGGCTTTCTTGCAGGAAG    940

BSNT_04107___    941 ATGATAAAAAAGAAGCGATTCGCGCTTATGAATATATGGGAC-TGACTCC    989
                     |.|||||||||||||||...|||||.||||||||||||||.| ||| .||
BL00613___leu    941 ACGATAAAAAAGAAGCGCAGCGCGCATATGAATATATGGGTCTTGA-ACC    989

BSNT_04107___    990 TCATCAGAAAATTGAAGACATTAAAGTGGAGCACGTATTTATCGGTTCCT   1039
                     ..||.|.|||||.||.|||||||.|.|.|||||.||.|||||||||||.|
BL00613___leu    990 ATATAAAAAAATCGAGGACATTACAATTGAGCATGTCTTTATCGGTTCAT   1039

BSNT_04107___   1040 GCACAAATTCCCGCATGACTGACCTTCGACAGGCTGCTGACATGATCAAA   1089
                     ||||.||.||.||.|||||.||.|||||.|||||.||.||.|||||.|||
BL00613___leu   1040 GCACCAACTCGCGTATGACAGATCTTCGCCAGGCGGCCGAAATGATTAAA   1089

BSNT_04107___   1090 GGGAAGAAGGTAGCTGACAGCGTAAGGGCCATCGTCGTGCCCGGATCCCA   1139
                     ||..|.||.||.||.|||.||||.||.||.||||||||.|||||.||.||
BL00613___leu   1090 GGTCAAAAAGTCGCCGACGGCGTCAGAGCGATCGTCGTACCCGGCTCGCA   1139

BSNT_04107___   1140 AAGCGTGAAGCTTCAGGCTGAAAAAGAAGGGCTTGACCAGATTTTCTTGG   1189
                     ||||||.||..|.||.||.|||||||||||||||.||.||||||||.|.|
BL00613___leu   1140 AAGCGTCAAAATCCAAGCGGAAAAAGAAGGGCTTCACAAGATTTTCATCG   1189

BSNT_04107___   1190 AAGCTGGATTTGAATGGAGAGAGTCAGGCTGCAGCATGTGTTTGAGTATG   1239
                     ||||.||.||||||||||||||.||.||.|||||||||||||||||.|||
BL00613___leu   1190 AAGCGGGCTTTGAATGGAGAGAATCGGGATGCAGCATGTGTTTGAGCATG   1239

BSNT_04107___   1240 AATAATGATGTTGTTCCTGAGGGAGAGCGCTGTGCATCAACCTCTAACCG   1289
                     ||.|||||||||||.|||||.|||||||||||.||.||.||.||.|||||
BL00613___leu   1240 AACAATGATGTTGTCCCTGAAGGAGAGCGCTGCGCTTCGACTTCCAACCG   1289

BSNT_04107___   1290 CAACTTCGAGGGCAGACAAGGAAAAGGTGCAAGAACACATCTCGTCAGCC   1339
                     |||.||.||.|||||.||.||.|||||.||.|||||.|||||||||||||
BL00613___leu   1290 CAATTTTGAAGGCAGGCAGGGCAAAGGAGCCAGAACGCATCTCGTCAGCC   1339

BSNT_04107___   1340 CGGCGATGGCTGCGATGGCTGCCATTCACGGACACTTCGTTGATGTCAGA   1389
                     |||||||||||||||||||.||.||||||||.|.|||.||.|||||||||
BL00613___leu   1340 CGGCGATGGCTGCGATGGCCGCGATTCACGGCCGCTTTGTCGATGTCAGA   1389

BSNT_04107___   1390 AAGTTTTATCAGGAAAAAACAGTTGTGTAA   1419
                     ||.|.|||.||.||.|.|||||.|||.||.
BL00613___leu   1390 AAATATTACCAAGAGACAACAGCTGTATAG   1419


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