Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04106 and BL00615

See Amino acid alignment / Visit BSNT_04106 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence dna-align/BSNT_04106___leuD.1.5803.seq
#    -bsequence dna-align/BL00615___leuD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04106___leuD-BL00615___leuD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04106___leuD-BL00615___leuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04106___leuD
# 2: BL00615___leuD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 604
# Identity:     459/604 (76.0%)
# Similarity:   459/604 (76.0%)
# Gaps:           8/604 ( 1.3%)
# Score: 1705.0
# 
#
#=======================================

BSNT_04106___      1 ATGGAACCTTTGAAATCACATACGGGGAAAGCAGCCGTATTAAATCGGAT     50
                     |||||.||.||.||..|.||||..||.|.|||.||.||..||||..|.||
BL00615___leu      1 ATGGAGCCATTAAAGACCCATAACGGAATAGCGGCGGTGCTAAACAGAAT     50

BSNT_04106___     51 CAATGTGGATACAGACCAGATTATTCCTAAGCAATTTTTGAAGAGGATTG    100
                     |||.||.||.||.||||||||.|||||.|||||||||||.||.|||||.|
BL00615___leu     51 CAACGTAGACACGGACCAGATCATTCCGAAGCAATTTTTAAAAAGGATCG    100

BSNT_04106___    101 AAAGAACAGGCTACGGGCGTTTTGCATTCTTTGACTGGAGATAT---GAT    147
                     |||||||.||.|||||.||||||||.||||||||||||.|.|||   |||
BL00615___leu    101 AAAGAACGGGATACGGCCGTTTTGCTTTCTTTGACTGGCGCTATCTGGAT    150

BSNT_04106___    148 GCGAATGGTGAACCGAACCCTGAATTTGAATTAAACCAGCCTGTTTATCA    197
                        ||.||.||.||.||.|||||.||||||.|.||||.|||.|..||..|
BL00615___leu    151 ---AACGGCGATCCCAATCCTGATTTTGAACTGAACCGGCCGGAATACAA    197

BSNT_04106___    198 AGGAGCTTCCATTTTAATAGCAGGAGAAAACTTCGGCTGCGGGTCATCGC    247
                     |||.|||||.||||||||.||.||.|||||||||||||||||.||.||..
BL00615___leu    198 AGGCGCTTCGATTTTAATCGCCGGCGAAAACTTCGGCTGCGGCTCTTCAA    247

BSNT_04106___    248 GTGAACACGCTCCGTGGGCACTTGATGATTATGGGTTTAAAATTATTATT    297
                     |.||||||||.||.|||||.|||||.||.||.||.||||||||.|||||.
BL00615___leu    248 GGGAACACGCGCCATGGGCGCTTGACGACTACGGATTTAAAATCATTATC    297

BSNT_04106___    298 GCACCGTCATTTGCTGATATTTTCCATCAGAACTGCTTTAAAAACGGTAT    347
                     ||.|||||.|||||.|||||.||.||.||.|||||.|||||||||||.||
BL00615___leu    298 GCGCCGTCTTTTGCCGATATCTTTCACCAAAACTGTTTTAAAAACGGCAT    347

BSNT_04106___    348 GCTTCCGATCCGCATGCCATATGACAATTGGAAACAGCTTGTCGGCCAGT    397
                     |||.|||||||||.|.||.|||||....||||||.||||||..|..||||
BL00615___leu    348 GCTGCCGATCCGCCTTCCTTATGAGGCGTGGAAAGAGCTTGCTGAACAGT    397

BSNT_04106___    398 ATGAAAACCAGTCATTGCAAATGACAGTTGACCTTGAAAAGCAGCTGAT-    446
                     ||||..|.||.||.|||...|||||.||.||.||.|||||.|||..||| 
BL00615___leu    398 ATGAGTATCAATCTTTGACGATGACGGTCGATCTCGAAAAACAGACGATA    447

BSNT_04106___    447 TCATGATAGTGAAGGCAATCAAATTTCATTTGAAGTTGATCCGCATTGGA    496
                     .|| |||..||..||....||.|||.|.|||||.||.|||||||||||||
BL00615___leu    448 ACA-GATCATGCCGGGCGGCAGATTGCCTTTGAGGTCGATCCGCATTGGA    496

BSNT_04106___    497 AAGAGATGCTGATCAACGGATATGATGAAATTTCATTAACGCTGCTGCTG    546
                     |||||||||||.|.|||||.||.||.||||||||.|||||..||||.||.
BL00615___leu    497 AAGAGATGCTGCTGAACGGTTACGACGAAATTTCTTTAACATTGCTCCTT    546

BSNT_04106___    547 GAAGATGAAATCAAGCAATTTGAATCACAAAGAAGCTCTTGGCTTCAAGC    596
                     |||||.||||||.|.||||||||...|||.|||||.||||||||.|||||
BL00615___leu    547 GAAGAAGAAATCGAACAATTTGAGAAACAGAGAAGTTCTTGGCTGCAAGC    596

BSNT_04106___    597 CTGA    600
                     .|.|
BL00615___leu    597 ATAA    600


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