Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04092 and BL00624
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence dna-align/BSNT_04092.1.5803.seq
# -bsequence dna-align/BL00624___hemX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04092-BL00624___hemX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04092-BL00624___hemX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04092
# 2: BL00624___hemX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 848
# Identity: 545/848 (64.3%)
# Similarity: 545/848 (64.3%)
# Gaps: 145/848 (17.1%)
# Score: 1952.5
#
#
#=======================================
BSNT_04092 0 -------------------------------------------------- 0
BL00624___hem 1 ATGACAGACACATTGTTAGCAAGGCTTAACGAAGTTACAATCGTGTTGTA 50
BSNT_04092 0 -------------------------------------------------- 0
BL00624___hem 51 CGCGTTCACCGTTCTCTTTTATTTTATAGACTTTTTACAGCACAACCGGA 100
BSNT_04092 1 -----------ATGGCCTTCTGGTTGCTTTCTATTGTCTGGACTCTGCAA 39
..|||||||||||||||||||||||||||||.|||.||.
BL00624___hem 101 AGGCGGGAAAAGCGGCCTTCTGGTTGCTTTCTATTGTCTGGATTCTCCAG 150
BSNT_04092 40 ACCGTGTA----TTTGGCCTATTTTATGTGGGTGACGGGGCGGTTTCCGG 85
||.||.|| ||| |||||.|||..|...||.|..|.||||||.|
BL00624___hem 151 ACGGTATACCTTTTT----TATTTCATGCAGTACACAGATCAGTTTCCTG 196
BSNT_04092 86 TATTAAAT-GTGACGGAGGCGCTTTATTTTTATGCCTGGGTGCTTGTCAC 134
|.||.||| .|| ||.|||.||||||||||||.||.||||||||.|||||
BL00624___hem 197 TTTTGAATAATG-CGCAGGGGCTTTATTTTTACGCGTGGGTGCTCGTCAC 245
BSNT_04092 135 GCTGTCACTGGTGCTGACAAAGCTTTT--ACGTGTTGACTTTATCGTGTT 182
||||||.||.||..||||.|||||||| |.||| ||.|||.||||.||
BL00624___hem 246 GCTGTCTCTCGTTTTGACGAAGCTTTTGAAAGTG--GAATTTCTCGTTTT 293
BSNT_04092 183 TTTTACAAATGTTATAGGATTTTCTATGATCGCCATTCACACATTTTCAC 232
|||.||.|||.|.||.||.||.||.|||...||.||.|||||||||.|.|
BL00624___hem 294 TTTCACCAATCTCATCGGCTTCTCAATGGCGGCGATCCACACATTTACTC 343
BSNT_04092 233 CGACAGAGCAGCAGTCAGC--TGCTTTTTCCGGGCA-GCTTGTATCCGAG 279
|.||.|..||||||||.|| .||||| |||||| |||.||.||||||
BL00624___hem 344 CAACGGCTCAGCAGTCGGCGGAGCTTT---CGGGCAGGCTCGTGTCCGAG 390
BSNT_04092 280 CTTTTGGTGATTCATATTACAATGGCGATTCTTTCATACGGCGCTTTTTC 329
||.|||.|.||.||.||||||||||||||||||||.||.||.||.|||||
BL00624___hem 391 CTCTTGATCATCCACATTACAATGGCGATTCTTTCGTATGGAGCATTTTC 440
BSNT_04092 330 CCTTTCTTTCGTTTTTTCTGTGCTATATATGTTTCAATATCATCTGC--- 376
..|.||.||.||.|||||.|||||.|||.|.|||||.|||| ||
BL00624___hem 441 ATTGTCCTTTGTCTTTTCCGTGCTGTATCTTTTTCAGTATC----GCTTA 486
BSNT_04092 377 -TGAAAAAGAAAAAGTGGGGAAAATGGCTGTTGAGAATAGAAGATTTATC 425
||||||||||.||||||||.||||||||.||||||||.||||||||.||
BL00624___hem 487 TTGAAAAAGAAGAAGTGGGGGAAATGGCTCTTGAGAATCGAAGATTTGTC 536
BSNT_04092 426 TAAGCTTGATTATATGGCGTATGTTTTAAATGTCATTGGGGTTCCGATGC 475
.||.||||||.|||||||.|||||..|.|||.||||.||.|||||.||||
BL00624___hem 537 AAAACTTGATCATATGGCTTATGTCCTCAATATCATCGGCGTTCCCATGC 586
BSNT_04092 476 TGCTGCTGAGTTTGATTCTCGGCGTCATATGGGCATATGTCTCACTAGAA 525
|.||||||||..|||||||.||..|.||.|||.|.|||||.||.||.|||
BL00624___hem 587 TTCTGCTGAGCCTGATTCTGGGGATTATCTGGTCGTATGTATCGCTTGAA 636
BSNT_04092 526 ACGCTGTATTGGTTTGACGCCAAAGTGCTTGGTTCGTTTGTCGTCCTGC- 574
||.|||||||||...||..|.||||||||.||.||| .||||.||||
BL00624___hem 637 ACCCTGTATTGGGCCGATCCGAAAGTGCTCGGATCG---ATCGTGCTGCT 683
BSNT_04092 575 --TGCTGTACAGCTATTATCTTTATATCAGGCTGATTAAAGAGCTGCAAG 622
|..|.|||.|.||.|||.|.|.|||||||.|..|.|||||||||||.|
BL00624___hem 684 TTTTTTATACGGATACTATTTATTTATCAGGATTGTCAAAGAGCTGCAGG 733
BSNT_04092 623 GAAAGGTCGCTGCACTGTGGAATACGGCTTGTTTTCTGGTGCTGATGATC 672
|||.|.||||.||..||||||||.|.||.|.||||||.||.||..|.|||
BL00624___hem 734 GAAGGATCGCGGCCATGTGGAATGCCGCGTCTTTTCTTGTTCTTTTAATC 783
BSNT_04092 673 AATTATTTCCTGCTTGGAAGCCTGTCGCAATTCCATTGGTTCAGTTAA 720
||||..||..||||.||.|||.|.|||||.||.||||||||.|||||.
BL00624___hem 784 AATTTCTTTTTGCTCGGCAGCTTTTCGCAGTTTCATTGGTTTAGTTAG 831
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