Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04090 and BL00625
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence dna-align/BSNT_04090___hemC.1.5803.seq
# -bsequence dna-align/BL00625___hemC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04090___hemC-BL00625___hemC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04090___hemC-BL00625___hemC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04090___hemC
# 2: BL00625___hemC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 980
# Identity: 699/980 (71.3%)
# Similarity: 699/980 (71.3%)
# Gaps: 73/980 ( 7.4%)
# Score: 2457.0
#
#
#=======================================
BSNT_04090___ 1 ATGATGAGAACGATTAAAGTAGGTTCCAGACGGAGCAAACTCGCTATGAC 50
|||||||..||.|..|||||.||.|||.|.||||||.|.||.|||||
BL00625___hem 1 ---ATGAGAAACATCATTGTAGGCTCAAGAAGAAGCAAATTGGCGATGAC 47
BSNT_04090___ 51 TCAAACAAAATGGGTTATTCAAAAA-CTGAAGGAAATCAATCC----TT- 94
.||.|||||||||||.| ||||||| |||.|||||.|.||||| ||
BL00625___hem 48 CCAGACAAAATGGGTGA-TCAAAAAGCTGGAGGAATTAAATCCGGATTTC 96
BSNT_04090___ 95 -CGTTTGTTTTTGAAATTAAAGAGATCGTGACAAAGGGCGACCGGATTGT 143
|| ||||||||.||.||.|||||.|||||.|||||||||||..|
BL00625___hem 97 ACG------TTTGAAATAAAGGAAATCGTTACAAAAGGCGACCGGATATT 140
BSNT_04090___ 144 CGATGTTACACTCTCAAAAGTGGGTGGAAAAGGGCTGTTTGTCAAAGAAA 193
.||||||||.||.|||||.||.||.||||||||.|||||.||||||||||
BL00625___hem 141 GGATGTTACGCTGTCAAAGGTCGGCGGAAAAGGTCTGTTCGTCAAAGAAA 190
BSNT_04090___ 194 TTGAACAGGCGCTTTTAAACGAAGAGATTGATATGGCGGTGCACAGCATG 243
|.|||||||||.|..|...||..||.|||||||||||.||.|||||||||
BL00625___hem 191 TCGAACAGGCGATGCTCTCCGGGGAAATTGATATGGCCGTTCACAGCATG 240
BSNT_04090___ 244 AAGGACATGCCTGCTGTTTTGCCTGAAGGGCTTGTGATCGGCTGTATTCC 293
|||||||||||..|.||..|.||.||||||||..||.|||||||.|||||
BL00625___hem 241 AAGGACATGCCGTCGGTGCTTCCCGAAGGGCTGATGGTCGGCTGCATTCC 290
BSNT_04090___ 294 TGAACGGGAAGACCCGCGTGATGCCCTTATTTCAAAGAATCGCGT--AAA 341
..|||||||||||.|..|.||||..||.||||||| ||...||| |||
BL00625___hem 291 AAAACGGGAAGACGCCAGGGATGTTCTCATTTCAA--AAGGCCGTCAAAA 338
BSNT_04090___ 342 GCTTTCAGAAATGAAGGAAGGTGCTGTCATTGGCACAAGCAGTTTAAGAA 391
|||..|.||..||||..||||.||.||..|.||.||.|||||..|.||||
BL00625___hem 339 GCTGGCTGACTTGAAACAAGGCGCAGTTGTCGGAACGAGCAGCCTCAGAA 388
BSNT_04090___ 392 GAAGCGCGCAGCTTTTG---ATTGAGCGCCCTGACCTTACAATTAAATGG 438
|||||||.||||||||| || ||||||.||||||...||.||.|||
BL00625___hem 389 GAAGCGCACAGCTTTTGCAAAT---GCGCCCCGACCTTGAGATCAAGTGG 435
BSNT_04090___ 439 ATTAGAGGTAATATAGATACAAGACTTCAAAAGCTGGAAACAGAGGATTA 488
||.||.||.|||||.||||||||.||..||||.||.|||||.||.|||||
BL00625___hem 436 ATCAGGGGAAATATCGATACAAGGCTGAAAAAACTTGAAACCGAAGATTA 485
BSNT_04090___ 489 TGACGCGATTATTTTAGCGGCTGCCGGCCTTTCTAGAATGGGGTGGAAGC 538
.|||||||||||||||||.||.||||||||.||.|||||||||||||||.
BL00625___hem 486 CGACGCGATTATTTTAGCTGCGGCCGGCCTGTCAAGAATGGGGTGGAAGG 535
BSNT_04090___ 539 AAGATGTCGTAACCGAATTCCTTGAGCCTGAGCGCTGTTTGCCTGCTGTG 588
|.||||||||.||.|||||.|||||.||.||..||||..|.||.||.||.
BL00625___hem 536 ACGATGTCGTCACTGAATTTCTTGATCCGGAAAGCTGCCTTCCCGCCGTT 585
BSNT_04090___ 589 GGGCAGGGAGCCCTGGCGATTGAGTGCCGAGAATCGGATGAAGAGCTGTT 638
|||||.||.||..|||||||.||||||.|||..||.|||||.||||||.|
BL00625___hem 586 GGGCAAGGCGCTTTGGCGATCGAGTGCAGAGGCTCTGATGAGGAGCTGCT 635
BSNT_04090___ 639 GGCGTTGTTTTCTCAGTTTACAG-ATGAA-------TATACAAAACGGAC 680
|.|..|.|||||.| | .|||| ||.|||.|.|.|||
BL00625___hem 636 GTCTCTCTTTTCGC--------GCCTGAACGACCGCTACACACAGCTGAC 677
BSNT_04090___ 681 TGTCTTAGCGGAACGTGCTTTTTTAAACGCGATGGAGGGCGGCTGCCAGG 730
.|||...||.||.||.||||||.|..|.||||||||.|||||||||||.|
BL00625___hem 678 CGTCACGGCTGAGCGCGCTTTTCTTCATGCGATGGAAGGCGGCTGCCAAG 727
BSNT_04090___ 731 TTCCGATCGCAGGCTACTCCGTGTT----AAATGGACAGGATGA------ 770
|.|||||||||||.| || |.|||||| ||.||
BL00625___hem 728 TGCCGATCGCAGGAT--------TTGCAAAGATGGAC--GAAGACGGCGT 767
BSNT_04090___ 771 AATTGAAATGACAGGGCTTGTCGCTTCACCTGACGGCAAAATCATTTTTA 820
.||.|||.||||.||.|||||.||.||.||||||||.||||.|.|.|..|
BL00625___hem 768 CATCGAACTGACCGGTCTTGTGGCATCGCCTGACGGAAAAACCGTATACA 817
BSNT_04090___ 821 AAGAAACCGTCACCGGAAACGATCCGGAGGAAGTAG-----GAAAGCGCT 865
.||||||.||.|..|||||.||||||||||..||.| ||| |
BL00625___hem 818 GAGAAACAGTAAAAGGAAAAGATCCGGAGGCTGTCGGCAGAGAA-----T 862
BSNT_04090___ 866 GTGCCGCTCTTATGGCTGACAGAGGAGCAAAAGATTTAATTGATCGTGTA 915
|.|||||..|.|||.|.||.|.|||||||||.|...|.|||||.||.||.
BL00625___hem 863 GCGCCGCAGTCATGTCGGAAAAAGGAGCAAAGGCACTGATTGACCGGGTG 912
BSNT_04090___ 916 AAACGGGAGCTTGATGAGGATGGAAAATGA 945
||||.||||||.||.||..|||.|..||||
BL00625___hem 913 AAACAGGAGCTGGAAGACCATGAAGCATGA 942
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