Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04088 and BL00627
See
Amino acid alignment /
Visit
BSNT_04088 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence dna-align/BSNT_04088___hemB.1.5803.seq
# -bsequence dna-align/BL00627___hemB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04088___hemB-BL00627___hemB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04088___hemB-BL00627___hemB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04088___hemB
# 2: BL00627___hemB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 994
# Identity: 729/994 (73.3%)
# Similarity: 729/994 (73.3%)
# Gaps: 38/994 ( 3.8%)
# Score: 2575.5
#
#
#=======================================
BSNT_04088___ 1 ATG--AGTCAATCATTTAATAGACACCGCCGCCTGCGGTCATCAAAAGCA 48
||| || .|||||||.|.||||||||||||||||||.|..||..||..
BL00627___hem 1 ATGGAAG--CATCATTTCAAAGACACCGCCGCCTGCGGACGACAGCAGGT 48
BSNT_04088___ 49 ATGAGAGAAA-TGGTAAAGGAAACAC--GTTTGCATCCATCAGATTTTAT 95
|||.| |||| ||||||.|||||| | |||...| .||||.|||||.||
BL00627___hem 49 ATGCG-GAAATTGGTAAGGGAAAC-CGAGTTAAGA-GCATCTGATTTCAT 95
BSNT_04088___ 96 TTATCCGATTTTTGT---CGTTGAAGGGCTGGAA-GGCAAAAAAGCTGTT 141
|||||||||.||||| ||..|||| .||| |.|||||..|..|||
BL00627___hem 96 TTATCCGATATTTGTTACCGAGGAAG----AGAACGTCAAAAGCGAAGTT 141
BSNT_04088___ 142 CCGTCAATGCCTGATGTTTACCATGTATCATTAGATTTATTGAA------ 185
||.||.|||||.|..||.|||||..|.||.||.||....|||||
BL00627___hem 142 CCTTCTATGCCGGGCGTGTACCAGCTGTCTTTGGACCGTTTGAAAGAGGA 191
BSNT_04088___ 186 ---GGATGAAGTAGCGGAGCTGGTCAAACTGGGCATTCAATCTGTTATCG 232
|||.|||||.|| .||| ||.||||||||||||||.||||
BL00627___hem 192 GATGGAGGAAGTCGC-AAGC--------CTCGGCATTCAATCTGTGATCG 232
BSNT_04088___ 233 TGTTCGGCATCCCGGAAGAAAAAGATGAT-TGCGGAACACAAGCGTACCA 281
|.||||||.|.||.||..|.||||||||| || ||||....|||.||.||
BL00627___hem 233 TCTTCGGCGTGCCTGAGCACAAAGATGATGTG-GGAAGCGGAGCCTATCA 281
BSNT_04088___ 282 TGATCACGGAATTGTCCAAAAAGCCATCACAGAAATTAAAGAACACTTCC 331
.||||||||.||.|||||||||||.||..||.||||||||.|..||||.|
BL00627___hem 282 CGATCACGGCATCGTCCAAAAAGCGATTGCACAAATTAAACAGGACTTTC 331
BSNT_04088___ 332 CTGAAATGGTTGTTGTCGCTGACACGTGCCTGTGCGAATATACAGACCAC 381
|||||.|.||.|||.||||.||.||||||||.|||||.||.||.||||||
BL00627___hem 332 CTGAACTTGTCGTTATCGCCGATACGTGCCTATGCGAGTACACGGACCAC 381
BSNT_04088___ 382 GGCCATTGCGGACTTGTCAAAGACGGGGTCATCCTCAATGATGAATCGCT 431
||.||.|||||.||.||..||.||||.|..||..|.|||||.||||||||
BL00627___hem 382 GGTCACTGCGGCCTGGTGGAAAACGGTGAAATTTTAAATGACGAATCGCT 431
BSNT_04088___ 432 GGAGCTTTTGGCGCAGACAGCTGTCAGCCAAGCGAAAGCAGGTGCGGATA 481
.|..||||||||..|.||.||||||||||||||....||||||||.||.|
BL00627___hem 432 TGTTCTTTTGGCAAAAACCGCTGTCAGCCAAGCCCGTGCAGGTGCTGACA 481
BSNT_04088___ 482 TCATTGCGCCATCAAACATGATGGACGGATTTGTTACAGTGATCAGAGAA 531
|.||||||||.|||||||||||||||||.||.|||.|.|..|||||.|||
BL00627___hem 482 TTATTGCGCCGTCAAACATGATGGACGGTTTCGTTGCCGCTATCAGGGAA 531
BSNT_04088___ 532 GCACTTGATAAAGAAGGATTCGTCAATATTCCCATCATGTCTTACGCTGT 581
||.||||||.|.||||||||....|||.|.||.||||||||.||||||||
BL00627___hem 532 GCGCTTGATCAGGAAGGATTTACAAATGTGCCGATCATGTCGTACGCTGT 581
BSNT_04088___ 582 TAAATATTCAAGTGAGTTTTACGGTCCGTTCCGTGATGCAGCAAACAGCA 631
.||||||.|.||.|..||||||||.||||||||.|||||.||....||||
BL00627___hem 582 AAAATATGCGAGCGCTTTTTACGGACCGTTCCGCGATGCTGCGGGAAGCA 631
BSNT_04088___ 632 CACCGCAATTCGGAGACCGCAAAACATATCAGATGGACCCTGCCAACCGT 681
..|||||.||.||.||||||||.||.||.||.|||||...|||||||||.
BL00627___hem 632 GTCCGCAGTTTGGCGACCGCAAGACGTACCAAATGGATTATGCCAACCGC 681
BSNT_04088___ 682 ATGGAGGCACTCCGCGAAGCACAATCAGATGTCGAAGAAGGCGCAGACTT 731
|.|||.||.|||||.||.|||.||||.|||||.|||||||||||.||..|
BL00627___hem 682 AGGGAAGCTCTCCGGGAGGCAAAATCCGATGTGGAAGAAGGCGCCGATGT 731
BSNT_04088___ 732 TTTGATTGTCAAACCTTCGCTTTCTTATATGGATATCATGCGTGACGTAA 781
|.||||.|||||.||..|||||||.|||.|.||||||.|..|.||.||.|
BL00627___hem 732 TCTGATCGTCAAGCCGACGCTTTCATATCTTGATATCGTCAGAGAAGTGA 781
BSNT_04088___ 782 AAAATGAGTTTACTTTGCCGCTCGTCGCTTATAATGTAAGCGGAGAGTAT 831
|.||.||.||||...||||..|.||||..||.|||||.|||||.||||||
BL00627___hem 782 AGAACGAATTTAACCTGCCTGTTGTCGGATACAATGTGAGCGGGGAGTAT 831
BSNT_04088___ 832 TCAATGGTGAAGGCTGCAGCGCAGAACGGCTGGATCAAAGAAAAAGAAAT 881
.|.|||||.||.||.||.||.||.|||||.|||||..|||||||||...|
BL00627___hem 832 GCTATGGTCAAAGCCGCCGCCCAAAACGGATGGATTGAAGAAAAAGCTCT 881
BSNT_04088___ 882 TGTGTTGGAAATTTTGACAAGCATGAAGCGCGCGGGTGCCGACCTGATTA 931
|||..|.|||||..||||||||||||||||.||.||.|||||..||||.|
BL00627___hem 882 TGTTCTCGAAATGCTGACAAGCATGAAGCGGGCTGGCGCCGATTTGATCA 931
BSNT_04088___ 932 TTACGTATCATGCGAAAGACGCAGCGAAATGGCTTGCGGAGTAA 975
|||||||...|||.||||||||.||.||||||.||.||||.|||
BL00627___hem 932 TTACGTACTTTGCAAAAGACGCGGCAAAATGGATTTCGGAATAA 975
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.