Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04087 and BL00628

See Amino acid alignment / Visit BSNT_04087 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence dna-align/BSNT_04087___hemL.1.5803.seq
#    -bsequence dna-align/BL00628___hemL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04087___hemL-BL00628___hemL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04087___hemL-BL00628___hemL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04087___hemL
# 2: BL00628___hemL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1320
# Identity:    1006/1320 (76.2%)
# Similarity:  1006/1320 (76.2%)
# Gaps:          51/1320 ( 3.9%)
# Score: 3762.5
# 
#
#=======================================

BSNT_04087___      1 ATGAGAAGCTATGAAAAATCAAAAACGGCTTTTAAAGAAGCGCAAAAACT     50
                     |||.|.||||||||.||.||.|||.||||.||..||||.||||||..|.|
BL00628___hem      1 ATGCGGAGCTATGAGAAGTCTAAAGCGGCATTCGAAGAGGCGCAACGAGT     50

BSNT_04087___     51 CATGCCGGGCGGTGTGAACAGTCCCGTTC-GCGCATTTAAATCGGTAGAC     99
                     ||||||||||||.|||||||| ||||.|| |.||.||||||||.||..||
BL00628___hem     51 CATGCCGGGCGGGGTGAACAG-CCCGGTCAGAGCCTTTAAATCAGTCAAC     99

BSNT_04087___    100 ATGGACCCGATTTTTATGGAGCGCGGAAAAGGCTCGAAAATCTTTGATAT    149
                     |||||||||||||||||||||||.||||||||.||.|||||||.||||||
BL00628___hem    100 ATGGACCCGATTTTTATGGAGCGGGGAAAAGGATCAAAAATCTATGATAT    149

BSNT_04087___    150 TGACGGGAATGAATATATTGACTACGTCTTGTCATGGGGGCCTTTAATTT    199
                     ||||||.||.|||||.||.||.||.|||.||||||||||.||..|.||||
BL00628___hem    150 TGACGGAAACGAATACATCGATTATGTCCTGTCATGGGGACCGCTTATTT    199

BSNT_04087___    200 TAGGGCATACAAATGACCGCGTCGTAGAAAGCCTCA-----AAAAAGTGG    244
                     |.||.||.|..|||||....||.|| |||||    |     ||||.|.||
BL00628___hem    200 TGGGCCACAGCAATGAAAAAGTGGT-GAAAG----AGATTCAAAAGGCGG    244

BSNT_04087___    245 CTGAATACGGGACAAGCTTTGGTGCTCCGACTGAAGTAGAAAATGAACTG    294
                     |.|||.|||||||||||||.|||||.|||||.|||.|.||||..||.||.
BL00628___hem    245 CAGAACACGGGACAAGCTTCGGTGCGCCGACAGAACTGGAAACCGAGCTT    294

BSNT_04087___    295 GCTAAGCTCGTCATTGATCGTGTGCCATCTGTAGAAATTGTACGAATGGT    344
                     ||..||||.|||||.||.||.||.||.||..|||||||.||.||.|||||
BL00628___hem    295 GCCGAGCTTGTCATCGACCGCGTTCCTTCCATAGAAATCGTCCGGATGGT    344

BSNT_04087___    345 AAGCTCCGGAACAGAGGCTACAATGAGTGCCCTCCGTTTGGCAAGGGGCT    394
                     .||||||||.||.|||||.||.|||||.|||.|.||..||||..|.||.|
BL00628___hem    345 GAGCTCCGGTACGGAGGCGACGATGAGCGCCTTGCGGCTGGCGCGCGGAT    394

BSNT_04087___    395 ATACGGGCCGCAACAAGATTTTAAAATTTGAGGGCTGCTACCACGGACAC    444
                     |.||.|||||.|||||.||..||||||||||.|||||||||||.||||||
BL00628___hem    395 ACACAGGCCGTAACAAAATCGTAAAATTTGAAGGCTGCTACCATGGACAC    444

BSNT_04087___    445 GGCGATTCTCTCTTGATTAAAGCTGGTTCAGGTGTTGCCACTCTCGGTCT    494
                     ||.|||||.||..||||||||||.||.||.||.||.||.||.|||||.||
BL00628___hem    445 GGTGATTCCCTGCTGATTAAAGCGGGCTCGGGAGTAGCGACACTCGGCCT    494

BSNT_04087___    495 GCCTGACAGCCCGGGGGTGCCTGAAGGCATTGCGAAAAACACCATCACCG    544
                     .|||||||||||.||.||.||.|||.|||||||.||||||||.||.||||
BL00628___hem    495 CCCTGACAGCCCCGGAGTTCCGGAAAGCATTGCAAAAAACACGATTACCG    544

BSNT_04087___    545 TTCCGTACAATGATTTAGAAAGTGTAAAGCTTG-CTTTCCAGCAATTCGG    593
                     ||||.|||||||||.|.|||||..|.||.|||| |||||.|| |||||||
BL00628___hem    545 TTCCTTACAATGATCTGGAAAGCATGAAACTTGTCTTTCAAG-AATTCGG    593

BSNT_04087___    594 TGAAGACATTGCGGGAGTCATTGTAGAGCCAGTTGCCGGAAATATGGGTG    643
                     .||.||||||||.||.|||||.||.||.||.||.||.||.||||||||.|
BL00628___hem    594 AGATGACATTGCAGGCGTCATCGTTGAACCTGTCGCTGGCAATATGGGCG    643

BSNT_04087___    644 TTGTTCCGCCGCAAGAAGGCTTCCT-GCAGGGTCTGCGTGATATCACTGA    692
                     |.||.||||||....||||.||||| |.|||| ||.||.||..|.|||||
BL00628___hem    644 TCGTACCGCCGGTTAAAGGGTTCCTCGAAGGG-CTTCGCGAGCTGACTGA    692

BSNT_04087___    693 GCAGTACGGCTCCCTGCTGATTTTTGATGAGGTGATGACAGGCTTCCGGG    742
                     |..|.|.|||.||||||||||.||||||||.|||||||||||.|||.|||
BL00628___hem    693 GACGCATGGCGCCCTGCTGATATTTGATGAAGTGATGACAGGATTCAGGG    742

BSNT_04087___    743 TCGATTATAACTGCGCTCAAGGTTACTTCGGCGTAACGCCTGATCTGACT    792
                     |.|||||.|||||.||.|||||.||.|||||.||.|||||||||.||||.
BL00628___hem    743 TGGATTACAACTGTGCCCAAGGCTATTTCGGGGTGACGCCTGATTTGACA    792

BSNT_04087___    793 TGTTTAGGAAAAGTAATCGGGGGCGGACTTCCTGTCGGCGCTTATGGCGG    842
                     ||..|.||||||||.|||||.|||||.||||||||||||||||||||.||
BL00628___hem    793 TGCCTCGGAAAAGTGATCGGCGGCGGTCTTCCTGTCGGCGCTTATGGAGG    842

BSNT_04087___    843 AAAGGCAGAAATCATGGAGCAGATCGCTCCAAGCGGTCCGATCTATCAAG    892
                     ||||||.||||||||||||.|||||||.||.|||||||||||||||||.|
BL00628___hem    843 AAAGGCGGAAATCATGGAGAAGATCGCGCCGAGCGGTCCGATCTATCAGG    892

BSNT_04087___    893 CTGGTACATTGTCAGGCAACCCGCTTGCGATGACGGCTGG-CTTAGAGAC    941
                     |.||.||..||||.||||||||||||||.|||||.||.|| ||| ||.||
BL00628___hem    893 CCGGGACGCTGTCCGGCAACCCGCTTGCCATGACAGCCGGACTT-GAAAC    941

BSNT_04087___    942 ATTGAAACAGCTGACACCTGAATCCTACAAGAATTTCATCAAAAAAGGCG    991
                     .||||||||||||||.||||||||||||..|.|.|||..|...||||..|
BL00628___hem    942 GTTGAAACAGCTGACCCCTGAATCCTACCGGGAATTCTCCCGCAAAGCTG    991

BSNT_04087___    992 ACAGGCTGGAAGAAGGAATTTCAAAAGCCGCCGAGGCTCATGGTATTCCG   1041
                     ||.|..|||||.||||||||||..||||.||.|||....||||.||||||
BL00628___hem    992 ACCGCTTGGAAAAAGGAATTTCTGAAGCTGCAGAGAAAAATGGCATTCCG   1041

BSNT_04087___   1042 CATACCTTTAACCGTGCAGGTTCGATGATCGGTTTCTTCTTTACTAACGA   1091
                     ..|||.||.|||.|.||.||.||.||||||||.||.|||||.||.||.|.
BL00628___hem   1042 TGTACATTCAACAGGGCGGGGTCTATGATCGGCTTTTTCTTCACAAATGG   1091

BSNT_04087___   1092 ACCAGTCATTAATTATGGAACAGCGAAATCA-TCTGA--TTTGAAGCTGT   1138
                     |||.|||||.|||||||..||||||||| || |||||  |..||  ||||
BL00628___hem   1092 ACCGGTCATCAATTATGATACAGCGAAA-CAGTCTGACCTCGGA--CTGT   1138

BSNT_04087___   1139 TCGC--AAGCTATTATAAAGGGATGGCAAATGAAGGGGTATTCCTTCCGC   1186
                     |.||  ||  |||||||||||.|||||..|||||||.||.||.||.||||
BL00628___hem   1139 TTGCCGAA--TATTATAAAGGAATGGCCGATGAAGGCGTGTTTCTGCCGC   1186

BSNT_04087___   1187 CATCACAATTCGAAGGTCTTTTCCTCTCAACGGCCCATACTGATGAAGAT   1236
                     |.|||||.||.|||||.||.|||.|.|||||.||.|||||.|||||.||.
BL00628___hem   1187 CTTCACAGTTTGAAGGGCTGTTCTTGTCAACCGCTCATACGGATGACGAC   1236

BSNT_04087___   1237 ATTGAAAACACAATCCAGGCAGCTGA----------GAAAGTATTTGCTG   1276
                     |||||..|.||.||..|.||.|||||          |||||         
BL00628___hem   1237 ATTGAGCATACGATTAAAGCTGCTGAACGCGTATTCGAAAG---------   1277

BSNT_04087___   1277 AGATCAGCCG---CAGATAA   1293
                      .||||||||   |||||||
BL00628___hem   1278 -AATCAGCCGCTCCAGATAA   1296


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