Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04079 and BL00632
See
Amino acid alignment /
Visit
BSNT_04079 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence dna-align/BSNT_04079___folC.1.5803.seq
# -bsequence dna-align/BL00632___folC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04079___folC-BL00632___folC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04079___folC-BL00632___folC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04079___folC
# 2: BL00632___folC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1412
# Identity: 889/1412 (63.0%)
# Similarity: 889/1412 (63.0%)
# Gaps: 232/1412 (16.4%)
# Score: 2509.5
#
#
#=======================================
BSNT_04079___ 1 TTGTTTACTGCATATCAAGATGCGCGCAGCTGGATTCACGGGAGGCTGAA 50
|||||.|...|.|.|.|.||.||.|.||||||||||.||||.|||||.||
BL00632___fol 1 TTGTTCAAAACGTTTGATGAAGCACTCAGCTGGATTAACGGAAGGCTTAA 50
BSNT_04079___ 51 ATTCGGGGTGAAGCCCGGACTTGG-CCGAATGAAACAGCTGATG-----G 94
||||||.|||||| ||||..|||| .||||||.||..||||.|| |
BL00632___fol 51 ATTCGGCGTGAAG-CCGGGTTTGGAACGAATGGAATGGCTGCTGAGAAAG 99
BSNT_04079___ 95 CGCGGTTAGGACATCCTGAAAAAAA----AATCCGAGCGTTCCACGTCGC 140
| |.||.||.||.||.||||| ||| |||.|.||.|||||
BL00632___fol 100 C-----TCGGGCACCCCGAGAAAAAGCTCAAT----GCGGTTCATGTCGC 140
BSNT_04079___ 141 AGGAACAAACGGTAAAGGATCAACTGTCGCTTTTATCCGTTC--TATGCT 188
.|||||||||||.|||||.|||||..||||||||.||||||| ||| |
BL00632___fol 141 CGGAACAAACGGAAAAGGTTCAACGATCGCTTTTCTCCGTTCGGTAT--T 188
BSNT_04079___ 189 GCAGGAAGCCGGATATACGGTTGGAACATTTACATCGCCTTATATTATTA 238
..|.||||||||.|||||.|..||.||.||.|||||.||.|||||.||.|
BL00632___fol 189 AAATGAAGCCGGTTATACAGCAGGCACCTTCACATCACCGTATATCATCA 238
BSNT_04079___ 239 CGTTTAATGAACGGATCAGCGTAAACGGGATACCGATTTCAGATGAGGAA 288
|.|||||.||||||||||||||..||||....|||||.||||||||.|||
BL00632___fol 239 CCTTTAACGAACGGATCAGCGTTGACGGCGCCCCGATCTCAGATGAAGAA 288
BSNT_04079___ 289 TGGACAGCACTCGTCAATCAAATGAAACCGC---ACGTTGAAGCCCTTGA 335
|||||.||.|||.|.|||.|..|....||.| .|.|||| .|||||
BL00632___fol 289 TGGACGGCGCTCTTTAATGAGGTCGGGCCTCTTGTCCTTGA---GCTTGA 335
BSNT_04079___ 336 TCAAACGGAATACGGACAGCCG--ACAGAATTTGAAATTATGACGGCCTG 383
..||||.||||.||| ||||| |||||||||||||||||.|||||.||
BL00632___fol 336 AAAAACCGAATTCGG--AGCCGCCACAGAATTTGAAATTATTACGGCATG 383
BSNT_04079___ 384 TGCATTTTTATATTTTGCAGAATTTCATAAGGTC-GATTTTGTTATTTTT 432
.||||||||||||||||| .||.|.||...||.| |||||||||||||||
BL00632___fol 384 CGCATTTTTATATTTTGC-TAAATACAGGCGGACAGATTTTGTTATTTTT 432
BSNT_04079___ 433 GAAACAGGTTTGGGCGGTAGATTCGATTCTACTAATGTGGTTGAA-CCGC 481
|||||.||.||.|||||..|.||.|||||.||.||.||.| |||| |||.
BL00632___fol 433 GAAACGGGCTTAGGCGGCCGTTTGGATTCGACAAACGTCG-TGAAGCCGA 481
BSNT_04079___ 482 TCTTAACTGTGATTACAAGCATTGGACACGATCATATG--AATATTTTG- 528
|.|||||.||.||.||....||.||.||.||.||||.| .|||||..|
BL00632___fol 482 TGTTAACGGTCATCACTTCGATCGGCCATGACCATACGGCGATATTAGGC 531
BSNT_04079___ 529 GGAAACACCATTG-AAGAAATTGCAGGAGAAAAGGCCGGTATTATTAAAG 577
||.| ||||| ||||.|||||.|..||||||||.||.||.||.|||.
BL00632___fol 532 GGTA----CATTGAAAGAGATTGCCGCGGAAAAGGCAGGGATCATCAAAC 577
BSNT_04079___ 578 AAGGTATTCCAATCGTTACAGCAGTTACCCAGCCGGAAGCTTTACAGGTC 627
..||..||||..|..|.|||||.|||...||||..|||||.....||||.
BL00632___fol 578 GCGGCGTTCCTGTTATCACAGCCGTTCATCAGCATGAAGCGGCTGAGGTG 627
BSNT_04079___ 628 ATCCGCCACGAAGCCGAACGGC-ATG----------CTGC-------GCC 659
|| ||..||||.||| ||| |||| .||
BL00632___fol 628 AT--------AAAGCGAAAGGCGATGGAGACAGAATCTGCTTTTATATCC 669
BSNT_04079___ 660 GTT--CCAGTCATTGCATGATGCATGTGTTATTTTCAATGAAGAGGCTCT 707
.|| |.|| .|||||..|.||.|.|.|....||||| .|
BL00632___fol 670 CTTCACGAG-GATTGCCAGCTGTACGGGGAGCTTTCA-----------TT 707
BSNT_04079___ 708 GCCTGCAGGAGAACAGTTTTCATTCAAAACGGAAGAGAA----------A 747
|||||..|||||.||||||||.||.||||| | |
BL00632___fol 708 GCCTGAGGGAGAGCAGTTTTCGTTGAAAAC--------ACCGTTACATCA 749
BSNT_04079___ 748 TGCTATGAAGATATTCGGACATCTCTGATTGGCACCCATCAAAGACAAAA 797
| |||||||..|||...|||...|||||.|||||||||||..|.|||||
BL00632___fol 750 T--TATGAAGGAATTGAAACAAGCCTGATCGGCACCCATCAGCGGCAAAA 797
BSNT_04079___ 798 TGCTGCTTTGTCCATTTTGGCTGCGGAGTGGCTCAATAAGGAGAATATCG 847
.||..|||||.||||..|.||.||.||.|||||.| .||..|||.|
BL00632___fol 798 CGCGTCTTTGGCCATACTTGCGGCCGAATGGCTGA--CAGCCGAAAA--- 842
BSNT_04079___ 848 CCCAT------ATCAGTGACGAAGCGTTAAGGAGCGGGCTT-GTGAAGGC 890
.||| |||.|.||..|||.|.|.|...||||..|| || ||.||
BL00632___fol 843 -ACATGCGGCGATCGGCGAAAAAGAGCTGAAACGCGGCATTCGT-AACGC 890
BSNT_04079___ 891 TGCTTGGCCGGGACGGTTAGAGCTTGTTCAG-----GAAC-ATCCTCCGG 934
.|..|||||.||.|||||.||| .|| |||| |.||||..|
BL00632___fol 891 GGGATGGCCCGGCCGGTTTGAG------AAGGTATTGAACAAGCCTCTTG 934
BSNT_04079___ 935 TATATTTAGACGGTGCGCATAACGAAGAAGGTGTTGAAAAGCTGGCGGAA 984
|.|||.|.|||||.||.||||||.|||||||..|.||...||||||.||.
BL00632___fol 935 TTTATATCGACGGCGCTCATAACAAAGAAGGGATGGAGCGGCTGGCCGAG 984
BSNT_04079___ 985 ACGATGAAGCAGCGT-----TTCGCC--------AATTCACGCATTACTG 1021
||||| ..|.| |||||| .|||||||.|
BL00632___fol 985 ACGAT-----CTCCTCCCACTTCGCCGGGCGGAATATTCACGTA------ 1023
BSNT_04079___ 1022 TGGTG-TTTAGCGC-GTTAAAGGACAAACCGTATCAGA-ACATGAT---T 1065
|| ||.||||| .||||| ||.||.||||| |||| ||||||| .
BL00632___fol 1024 ---TGCTTCAGCGCTCTTAAA-GATAAGCCGTA-CAGAGACATGATCCGC 1068
BSNT_04079___ 1066 AAAAGACTGGAAACCATTGC-TCATGCGATTCATTTTGCTTCTTTTGATT 1114
|||| |.||..|..|||| |||| |||||||.||..|.||.|||||||
BL00632___fol 1069 AAAA---TCGAGTCGTTTGCGTCAT-CGATTCACTTCACATCCTTTGATT 1114
BSNT_04079___ 1115 TCCCGCGTGC----TTCTCTTGCAAAAGATCTCTATGATGCAAGTGAAAT 1160
|||||.|.|| |.|.|| |||||| ||.|.||| ||||
BL00632___fol 1115 TCCCGAGGGCGGAATCCGCT--CAAAAG--CTGTTTGA-GCAA------- 1152
BSNT_04079___ 1161 CAGCA---------ATAAAAGC--TGGAGTGAAGATCCA--GACGATGTG 1197
||.| |||||| | |.|| |||||| || |.|..|||.
BL00632___fol 1153 -AGTACCGCTGATTATAAAA-CATTTGA-TGAAGA--CATCGCCTCTGTT 1197
BSNT_04079___ 1198 ATCAAATTCATAGAAAGCAAAAAGGGCTCAA-ATGAAATTACGCTG---- 1242
.||...|..||.||| .||||| |||.|| |.||||...||.||
BL00632___fol 1198 TTCCGGTATATCGAA--GAAAAA--GCTGAAGAGGAAAAAGCGGTGGTCG 1243
BSNT_04079___ 1243 --ATTACCGGATCTCTTTACTTTATTTCTGACATTCGAAAAAGG------ 1284
||.|||||.||.|||||.||||||||.|.|.| .|||
BL00632___fol 1244 TTATCACCGGGTCGCTTTATTTTATTTCCGCCGT------CAGGGCAGCT 1287
BSNT_04079___ 1285 TTGA---AATAA 1293
||.| |||||
BL00632___fol 1288 TTAACTGAATAA 1299
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.