Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03433 and BL00647
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence dna-align/BSNT_03433___serA.1.5803.seq
# -bsequence dna-align/BL00647___serA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03433___serA-BL00647___serA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03433___serA-BL00647___serA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03433___serA
# 2: BL00647___serA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1590
# Identity: 1211/1590 (76.2%)
# Similarity: 1211/1590 (76.2%)
# Gaps: 24/1590 ( 1.5%)
# Score: 4452.0
#
#
#=======================================
BSNT_03433___ 1 ATGTTTCGAGTATTGGTCTCAGACAAAATGAGCAACGACGGTTTACAGCC 50
|||||||||||||||||||||||.||||||..||.||||||..|..|.||
BL00647___ser 1 ATGTTTCGAGTATTGGTCTCAGATAAAATGTCCAGCGACGGCCTCAAACC 50
BSNT_03433___ 51 ACTTATTGAATCAGACTTTATTGAAATCGTTCAAAAAAACGTAGCAGATG 100
|.|.||.|||.||||.|||||||||||.||..||||.||.||.||.||.|
BL00647___ser 51 ATTAATGGAAGCAGATTTTATTGAAATTGTAGAAAAGAATGTTGCGGAAG 100
BSNT_03433___ 101 CAGAAGATGAATTACATACTTTTGATGCTCTTTTGGTGCGAAGTGCGACA 150
|.|||||.||..|.|||||.|||||.||.||.||||||||.||.||.||.
BL00647___ser 101 CGGAAGACGAGCTTCATACGTTTGACGCGCTCTTGGTGCGGAGCGCCACG 150
BSNT_03433___ 151 AAAGTAACAGAAGACCTTTTCAACAAAATGACTTCTTTAAAAATTGTCGG 200
||.|||||.|||||.||.||.||.||.||||||||..|.|||||.||||.
BL00647___ser 151 AAGGTAACCGAAGAGCTGTTTAAAAAGATGACTTCGCTGAAAATCGTCGC 200
BSNT_03433___ 201 AAGAGCCGGTGTCGGTGTCGATAATATCGATATTGATGAGGCTACGAAAC 250
.|||||.||||||||.|||||.||||||||||||||.|||||.||.||||
BL00647___ser 201 CAGAGCAGGTGTCGGCGTCGACAATATCGATATTGACGAGGCGACAAAAC 250
BSNT_03433___ 251 ACGGGGTAATCGTGATCAATGCTCCGAACGGCAACACCATTTCGACAGCT 300
||||.||.|||||..|.||.||.||.|||||.||.||.|||||.||.|||
BL00647___ser 251 ACGGTGTTATCGTCGTAAACGCGCCAAACGGGAATACAATTTCAACCGCT 300
BSNT_03433___ 301 GAGCATACATTTGCAATGATATCTTCTTTAATGAGACACATTCCGCAGGC 350
||.|||||.|||||||||.|.||..|.|||||||||||.|||||||||||
BL00647___ser 301 GAACATACCTTTGCAATGTTTTCAGCGTTAATGAGACATATTCCGCAGGC 350
BSNT_03433___ 351 TAATATCTCAGTGAAATCCAGAGAGTGGAACCGCACAGCTTATGTCGGTT 400
.||.|||||.||||||||.||.||||||||.||..|.|||||.|||||||
BL00647___ser 351 AAACATCTCCGTGAAATCAAGGGAGTGGAATCGTTCGGCTTACGTCGGTT 400
BSNT_03433___ 401 CAGAGCTTTATGGAAAAACGCTTGGTATTGTAGGATTAGGCCGAATCGGA 450
||||||||||.|||||||||||.||.||..|.|||.|.|||||.||||||
BL00647___ser 401 CAGAGCTTTACGGAAAAACGCTCGGCATCATCGGAATGGGCCGCATCGGA 450
BSNT_03433___ 451 AGTGAAATTGCACAG-CGTGCGAGAGCATTCGGTATGACTGTGCACGTTT 499
||.|||||.|| .|| ||.||.|.|||||||||||||||.||.||.||.|
BL00647___ser 451 AGCGAAATCGC-GAGCCGCGCAAAAGCATTCGGTATGACCGTTCATGTAT 499
BSNT_03433___ 500 TTGATCCTTTCTTAACGGAAGAAAGAGCGAAAAAAATCGGCGTAAACAGC 549
||||.||.|||.|.||..|||||||.||.|..||..|||||||.||| .
BL00647___ser 500 TTGACCCGTTCCTGACCCAAGAAAGGGCAAGCAAGCTCGGCGTTAAC--G 547
BSNT_03433___ 550 CGTACA--TTTGAAGAAGTGCTTGAAAGTGCGGATATCATTACCGTTCAC 597
||.||| |||||||||||.||.|.|.|.||.||.||||||||.|||||.
BL00647___ser 548 CGAACAGCTTTGAAGAAGTTCTGGCATGCGCCGACATCATTACGGTTCAT 597
BSNT_03433___ 598 ACGCCTTTAACAAAAGAAACAAAAGG-CTTATTGAATAAAGAAACGATTG 646
||.||..|.||.||||||||.||.|| ||| |||||.||||||||.||.|
BL00647___ser 598 ACCCCGCTCACGAAAGAAACGAAGGGACTT-TTGAACAAAGAAACCATCG 646
BSNT_03433___ 647 CAAAAACGAAAAAAGGCGTTCGCTTAATTAACTGTGCGCGAGGCGGAATT 696
||||||||||||||||||||||..|..||||||||||..|||||||.||.
BL00647___ser 647 CAAAAACGAAAAAAGGCGTTCGTCTCGTTAACTGTGCAAGAGGCGGCATC 696
BSNT_03433___ 697 ATCGATGAAGCAGCACTTCTCGAAGCTTTGGAAAACGGGCATGTTGCGGG 746
||||||||||||||.|||.|.||||||.||||||.|||.|||||.||.||
BL00647___ser 697 ATCGATGAAGCAGCGCTTTTGGAAGCTCTGGAAAGCGGACATGTCGCTGG 746
BSNT_03433___ 747 AGCGGCGCTT-GACGTTTTCGAAGTTGAACCGCCAGTTGA--CAATAAAC 793
.||.|| ||| ||.||.||||||||.||.||.||.||.|| || ||||
BL00647___ser 747 CGCTGC-CTTGGATGTATTCGAAGTCGAGCCTCCGGTCGATTCA--AAAC 793
BSNT_03433___ 794 TTGTTGATCATCCATTAGTCATTGCCACTCCTCACTTGGGAGCATCAACG 843
|..|.||||||||..|.||..|.||.||||||||||||||.||.|||||.
BL00647___ser 794 TGATCGATCATCCGCTTGTAGTCGCGACTCCTCACTTGGGCGCCTCAACA 843
BSNT_03433___ 844 AAAGAAGCACAGCTCAATGTCGCCGCCCAAGTGTCAGAAGAAGTTCTGCA 893
||||||||.|||||.||||||||.||.||||||||.||||||||.||.||
BL00647___ser 844 AAAGAAGCCCAGCTGAATGTCGCTGCACAAGTGTCCGAAGAAGTCCTTCA 893
BSNT_03433___ 894 GTTCGCAAAAGGCCTGCCTGTCATGTCAGCTATCAACCTGCCTGCCATGA 943
||..||..||||....|||||.|||||.||.||||||||.||.|||||||
BL00647___ser 894 GTATGCGCAAGGAAACCCTGTGATGTCCGCGATCAACCTTCCGGCCATGA 943
BSNT_03433___ 944 CAAAGGATGAATTTGCTAAAATTAAACCCTACCATCAAATTGCAGGAAAA 993
||||||||..|||.|..|||||..|.||.||.|||||..|||| .||.|
BL00647___ser 944 CAAAGGATTCATTCGAAAAAATCCAGCCTTATCATCAGTTTGC--CAATA 991
BSNT_03433___ 994 --ATTGGCAGCCTTGTATCACAGTGCATGAAAGAACCAGTACAGGATGTT 1041
||.||.|.||||||.||.|||||||||||.||.||.||.||.|||||.
BL00647___ser 992 CGATCGGAAACCTTGTGTCTCAGTGCATGAATGAGCCTGTTCAAGATGTA 1041
BSNT_03433___ 1042 GCCATTCAATATGAAGGCACAATTGCTAAACTTGAAACATCGTTCATTAC 1091
|||||.||||||||||||.|.||.||.|||||||||||.||.||.|||||
BL00647___ser 1042 GCCATCCAATATGAAGGCTCCATCGCCAAACTTGAAACGTCATTTATTAC 1091
BSNT_03433___ 1092 -AAAAGCCCTTCTGTCAGGCTTTTTAAAACCGCGCGTTGACTCTACTGTT 1140
||||| ||||.||.|.||.|||.|.||.|||.|.||.|...||||.|||
BL00647___ser 1092 GAAAAG-CCTTTTGGCCGGATTTCTGAAGCCGAGGGTCGCGGCTACCGTT 1140
BSNT_03433___ 1141 AACGAGGTCAATGCCGGGGGTGTCGCAAAAGAACGCGGCATCAGCTTCAG 1190
|||||.||.||||||||....||.||.|||||.|||||||||||||||||
BL00647___ser 1141 AACGAAGTGAATGCCGGCACCGTTGCGAAAGAGCGCGGCATCAGCTTCAG 1190
BSNT_03433___ 1191 TGAAAAAATTTCCTCTTCTGAATCTGGATACGATAACTGCATCAGCGTAA 1240
.|||||||||||.||...|||.||.||.||.||.|||||||||...||.|
BL00647___ser 1191 CGAAAAAATTTCTTCCAATGAGTCAGGCTATGAAAACTGCATCTCTGTGA 1240
BSNT_03433___ 1241 AAGTGACAGGAGACCGCAGC-ACCTTTACTGTAACGGCTACGTATATTCC 1289
..||.||.||||| .|.|.| ||.||..||.|||..||.|||||.|||||
BL00647___ser 1241 CTGTCACGGGAGA-TGTAACAACATTCTCTTTAAGAGCGACGTACATTCC 1289
BSNT_03433___ 1290 TCATTTCGGAGAACGAATTGTCGAGATCAATGGATTTAATATTGATTTTT 1339
.||.|||||.|.|||.||.||.|...|.||.||.|||.||||||||||||
BL00647___ser 1290 GCACTTCGGCGGACGCATCGTTGCCTTAAACGGCTTTGATATTGATTTTT 1339
BSNT_03433___ 1340 ATCCGACAGGTCACTTGGTGTATATCCAGCATCAAGATACAACAGGTGTC 1389
|||||.|.||.|||.|.||.||.||.||.||.||.||||.|.||||.|..
BL00647___ser 1340 ATCCGGCTGGACACCTTGTCTACATTCACCACCAGGATAAACCAGGGGCT 1389
BSNT_03433___ 1390 ATCGGCCGAGTAGGACGTATTCTCGGAGATAATGATATTAACATTGCAAC 1439
|||||||..||.|||||.|||.|.|||||..||||.||.||.||.||.||
BL00647___ser 1390 ATCGGCCATGTCGGACGAATTTTAGGAGACCATGACATCAATATCGCCAC 1439
BSNT_03433___ 1440 CATGCAGGTTGGCCGTAAGGAAAAAGGCGGAGAAGCCATCATGATGCTTT 1489
.||||||||.|||||.||.|||||||||||||||||.|||||||||||||
BL00647___ser 1440 TATGCAGGTAGGCCGAAAAGAAAAAGGCGGAGAAGCGATCATGATGCTTT 1489
BSNT_03433___ 1490 CCTTTGACAGACATCTGGAAGATAAAATTGTGAAAGAACTAACAAATGTC 1539
||||||||.|.||.||.||.||..|.|||.|....||.||.|.|||..||
BL00647___ser 1490 CCTTTGACCGCCACCTTGAGGACGATATTTTAGCTGAGCTGAAAAACATC 1539
BSNT_03433___ 1540 CCTGATATTGTGTCCG-TGAAGCTCATTGATCTGCCATAA 1578
||.|||||.|||||.| |.|||| |||.||.||.||.|||
BL00647___ser 1540 CCGGATATCGTGTCTGTTAAAGC-CATCGACCTTCCTTAA 1578
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