Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03444 and BL00660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence dna-align/BSNT_03444___resB.1.5803.seq
# -bsequence dna-align/BL00660___resB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03444___resB-BL00660___resB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03444___resB-BL00660___resB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03444___resB
# 2: BL00660___resB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1695
# Identity: 1194/1695 (70.4%)
# Similarity: 1194/1695 (70.4%)
# Gaps: 132/1695 ( 7.8%)
# Score: 4000.5
#
#
#=======================================
BSNT_03444___ 1 ATGAAGCAAGTCAAATGTGAATGCGGACATATAAACCCGGTCGGAACCGT 50
|||||..||.|||||||.||||||||.|||.|.||.||||..||.|||||
BL00660___res 1 ATGAAAGAAATCAAATGCGAATGCGGCCATGTGAATCCGGCGGGTACCGT 50
BSNT_03444___ 51 TTTATGCGAATCGTGCGGAAGAGCTCTT-------CAGGAAACTCAACCT 93
|||.||.||||||||||||| |||...| |||||..| |||.||
BL00660___res 51 TTTGTGTGAATCGTGCGGAA-AGCCGCTGGTCAAACAGGATGC-CAAACT 98
BSNT_03444___ 94 CCGCTCGCTGATATGAGATATGACGGAAGCGCAAGACGTTCGCAAACCTA 143
|| .|||.|||.|.|||||||||||.||.|||||.||.||||||||
BL00660___res 99 CC-----TTGACATGCGGTATGACGGAAGTGCGAGACGCTCTCAAACCTA 143
BSNT_03444___ 144 TAACAAAACGATCATCGATAAAATTTGGAATTTCTTTTCCTCGGTTAAGG 193
|||.|||||||||.|.||||||||.||||||||||||||.||.||.||||
BL00660___res 144 TAATAAAACGATCGTAGATAAAATATGGAATTTCTTTTCGTCTGTAAAGG 193
BSNT_03444___ 194 TGGGAATATGGCTTATCGTCATAACCCTTGCCGCATCAGCGTTCGGCACC 243
|.||..|.|||||.||||||||.||.||..|.|||||.||.||.||.||.
BL00660___res 194 TCGGCGTCTGGCTGATCGTCATTACGCTGACAGCATCCGCTTTTGGAACG 243
BSNT_03444___ 244 ATTTTTCCCCAGGAAGCCTAT----CTGCCTCCGGGCGCACAGGCTGATA 289
||.|||||.|||||| || |||||.|||||.||.||||||||||
BL00660___res 244 ATATTTCCGCAGGAA----ATGTTCCTGCCGCCGGGTGCGCAGGCTGATA 289
BSNT_03444___ 290 CTTATTACAAGGAGCAGTACGGCACGT-TCGGCCAGCTTTATTATTTGCT 338
|.||.||||..||.||.||||| .|.| ||||.||..|.||||||...||
BL00660___res 290 CATACTACAGCGAACAATACGG-GCTTCTCGGACAAATCTATTATGCTCT 338
BSNT_03444___ 339 CGGGTTTCATCATTTATATGGTTCTTGGTGGTATTTGCTGCTCATTGCCT 388
|||.|||||..||.|.||.|||||.|||||||.|.|..|.||..||||||
BL00660___res 339 CGGTTTTCACAATCTCTACGGTTCATGGTGGTTTATTATTCTGGTTGCCT 388
BSNT_03444___ 389 CGATCGGCATTTCACTCGTGATTTGCAGCCTTGATCGGGTCATTCCGTTG 438
|.|||||||||||.||.||.||.|||||||||||.||||||.||||.|||
BL00660___res 389 CAATCGGCATTTCGCTTGTCATCTGCAGCCTTGACCGGGTCGTTCCTTTG 438
BSNT_03444___ 439 TACAGAGCGTTAAAAAACCAAGGCGTCA---GAAGGAGCCCAGCTTTTTT 485
|||||.||..|.||||||||.||||||| ||| |.||.|.||||.|.
BL00660___res 439 TACAGGGCCCTGAAAAACCAGGGCGTCACGCGAA--ATCCGAACTTTATG 486
BSNT_03444___ 486 AAGAAGGCAGCGCTTGTTCAG------TGAAACAGTTAC-TGTACTGAAC 528
.|| |||||||||.|.||||| .|||.|.| || ||| ||||
BL00660___res 487 GAG-AGGCAGCGCCTATTCAGCCGGACGGAAGCGG--ACATGT-CTGA-- 530
BSNT_03444___ 529 GGGGAATCGAAA---GAAAAGATAGTT--GCTCTATTAAAGAAAAAACAT 573
|||..|.||| .|||..||.|.| || |.||||||||||..
BL00660___res 531 --GGACACAAAATCGCAAATCATCGGTAAGC-----TGAAGAAAAAACGA 573
BSNT_03444___ 574 TATAGAATCAGAGAAAAAGAGGGCAGCATTCTTGCTGAAAAAGGACGCTT 623
||..|..|||..|||.||.|.||||.|.|..||||.||||||||.||.||
BL00660___res 574 TACCGCGTCAAGGAAGAAAACGGCAACCTATTTGCCGAAAAAGGCCGTTT 623
BSNT_03444___ 624 TTCCCGCTGGGGCCCGTATGTCAACCATATTGGATTGATCATCTTTTTGA 673
|||..|.||||||||.|||||.||||||||.|||.||||.||.||..|.|
BL00660___res 624 TTCAAGGTGGGGCCCATATGTTAACCATATCGGACTGATTATATTCCTCA 673
BSNT_03444___ 674 TTGGTGCGATGCTGAGATTTGTGCCTGGCATGTACGTCGATGAGACGCTT 723
|.||.|..|||||.||||||||.||.||||||||.|||||.||.||.|||
BL00660___res 674 TCGGGGTCATGCTCAGATTTGTCCCGGGCATGTATGTCGACGAAACCCTT 723
BSNT_03444___ 724 TGGGTCAGAGAAGGCGAAACCGCCGCAATTCCGGGTACAGACGGAAAATA 773
|||.||||.|||||.|||||.|...||||||||||.||.|||||..|.||
BL00660___res 724 TGGATCAGGGAAGGGGAAACGGTGCCAATTCCGGGAACTGACGGCCATTA 773
BSNT_03444___ 774 TTATTTGAAAAACAATCAATTCAGCGTAGAGACCTATAACAGCAAAACAG 823
.||||||||||||||.|..||.|....|||.|..||..||||..|||.||
BL00660___res 774 CTATTTGAAAAACAACCGGTTTATAAAAGAAATGTACGACAGTGAAAAAG 823
BSNT_03444___ 824 AAAAAAAGGTATTTGCAGATGCCATTGACAGAGTCGGGGACGGTAGAGTG 873
|||||.|.||||||.||||.||.||...||.||..||.|||||.|..||.
BL00660___res 824 AAAAAGAAGTATTTTCAGAGGCGATCACCAAAGCTGGTGACGGGACTGTC 873
BSNT_03444___ 874 GCAAAGAAC-TTTCAAACCGATGCCGTACTCTACAAGAGAGAAGGAAAAA 922
||||| ||| |.|||||||||||..|.|||.|| .|||.||||||
BL00660___res 874 GCAAA-AACATATCAAACCGATGTTGAACTGTA------TGAAAGAAAAA 916
BSNT_03444___ 923 TTGTTTA-----TGGCGAGAAGCCGAAGC--------TGAAAAAAGTAAC 959
.|| | ||.|| |.|||||| ||||.|||||.|.
BL00660___res 917 ATG---ACAGCCTGCCG----GGCGAAGCGCCTGAATTGAAGAAAGTGAA 959
BSNT_03444___ 960 AGAAG--AAGACATCCGTGTCAATCAGCCGCTGCGTTTTGATTCTTTTTC 1007
|.|.| ||| |||...||||||.|.|||.||...||.|.|||.|.|.|
BL00660___res 960 AAACGGCAAG--ATCAAGGTCAATGACCCGTTGAAATTCGGTTCATATGC 1007
BSNT_03444___ 1008 CGTTTACCAGGTGGATTACAAAGAGAATC-AGCTTGACCAAATGGTGTTC 1056
..|.||.|||.||...|||||.|| |..| ||||.|||.||||||||||.
BL00660___res 1008 ACTCTATCAGCTGACATACAAGGA-AGGCGAGCTCGACAAAATGGTGTTT 1056
BSNT_03444___ 1057 CAGCTGATTGATAAAAAAACA--AAAAAATCCTTTGGGAGCCTGAAG--- 1101
|||||||||| |||||.||| ...||||||||.||.| |||
BL00660___res 1057 CAGCTGATTG--AAAAAGACAGCGGGAAATCCTTCGGCA-----AAGTGG 1099
BSNT_03444___ 1102 --ATCAACCTTCTGGATCCAGATTCGGTCTATGATCTTGGCAACGGTTAC 1149
|||.||||..||||.||..|..|||..|||||||||||.|||||||||
BL00660___res 1100 CAATCGACCTCTTGGAGCCGAAACCGGAATATGATCTTGGTAACGGTTAC 1149
BSNT_03444___ 1150 AAGGTGGAAATCGCCAGCTACCTGCCTGACTTCTATTTTAATCAGGACGG 1199
||.||..|.||.||.|||||||||||.|||||.||||||||..|.|||||
BL00660___res 1150 AAAGTTCATATAGCAAGCTACCTGCCGGACTTTTATTTTAACAAAGACGG 1199
BSNT_03444___ 1200 AGAGCCGAGCACAAAAACAAAGATCCCTAACAATCCGGCTTTTGTCTTTA 1249
.||.||||||||.|||||.|.||..||.|||||||||||.|||||.||..
BL00660___res 1200 GGAACCGAGCACGAAAACGAGGAATCCGAACAATCCGGCATTTGTATTCC 1249
BSNT_03444___ 1250 ATATTATAACGCCGGACAAACCGAAAGGCGAAAAGAGCTTTGTCGCCATC 1299
|.||.|...|.|||||.||.||.|||||.|||||.||.||.||.||.||.
BL00660___res 1250 AGATCACCGCACCGGATAAGCCTAAAGGAGAAAAAAGTTTCGTGGCGATT 1299
BSNT_03444___ 1300 CAAGAAACCATCGAAGGATCAGACAATAATAAATACAAGCTGAAATTTGA 1349
||.|||||.||||||||.||.|||.|.|||||||||||..||||.|||||
BL00660___res 1300 CAGGAAACAATCGAAGGTTCTGACGACAATAAATACAAAATGAAGTTTGA 1349
BSNT_03444___ 1350 CCATGTCGAAACGAAAAACATTACTGGACTTACAGTCAGAAAGGATCTGA 1399
|||||||||||||||.||..|..|.||.||.|||.|.|||||.|||.|||
BL00660___res 1350 CCATGTCGAAACGAAGAATCTCTCAGGCCTCACAATTAGAAAAGATTTGA 1399
BSNT_03444___ 1400 CACTCTGGGTGCT--TGCTGTCGGCGGAGCCATTTTTATGATCGGTGTTA 1447
|..|.|||||||| || ||||||||.|||||.|||||||||||.||.|
BL00660___res 1400 CTTTGTGGGTGCTCATG--GTCGGCGGTGCCATCTTTATGATCGGCGTCA 1447
BSNT_03444___ 1448 TTCAAGGTATGTACTGGCAGCATCGAAGAATTTGGCT--GCACTCACAGG 1495
||||.||.|||||||||||.|||.||||.||.||||| |.| |.|.||
BL00660___res 1448 TTCAGGGGATGTACTGGCACCATAGAAGGATCTGGCTCAGAA--CGCTGG 1495
BSNT_03444___ 1496 ACGGTGCA-GTTATGGTAGCGGGGCATACCAATAAAAACTGGTTTGGCCT 1544
|||| ||| ||..|.||.||.||.|||||.||.||||||||||..||.||
BL00660___res 1496 ACGG-GCATGTGCTCGTCGCCGGACATACGAACAAAAACTGGTACGGGCT 1544
BSNT_03444___ 1545 GAAGAAGGATTT--------AGCATTTATATTGGCTGATTCCGGACTGAC 1586
||||.||||.|| .|| |.||.|||.|.||..|..|
BL00660___res 1545 GAAGCAGGACTTGAAGGCCGCGC--------TCGCGGATACGGGGATATC 1586
BSNT_03444___ 1587 TGAACCGGTGGACCAAAAAGAATTAATCAAA--ACACAGAAATAG 1629
.|||||||..||.|||||||||.| .||||| | |.|.|||||.
BL00660___res 1587 CGAACCGGCCGATCAAAAAGAACT-GTCAAAGGA-AAAAAAATAA 1629
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