Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04964 and BL00705

See Amino acid alignment / Visit BSNT_04964 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:09
# Commandline: needle
#    -asequence dna-align/BSNT_04964___fhuC.1.5803.seq
#    -bsequence dna-align/BL00705___fhuC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04964___fhuC-BL00705___fhuC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04964___fhuC-BL00705___fhuC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04964___fhuC
# 2: BL00705___fhuC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 830
# Identity:     586/830 (70.6%)
# Similarity:   586/830 (70.6%)
# Gaps:          37/830 ( 4.5%)
# Score: 1922.0
# 
#
#=======================================

BSNT_04964___      1 ATGAATTCATTATCAACGGAAC-AGCTTGGAATCGGTTATGGCG-ACAGG     48
                     .||   ||..|.||||| .||| |.||.||.|||||.||.|||| ||| |
BL00705___fhu      1 GTG---TCTCTTTCAAC-AAACAACCTGGGGATCGGCTACGGCGAACA-G     45

BSNT_04964___     49 GTGATTGTAGAGGATTTAAATATATCGATTCCTAAAGGGAAAATTACCAC     98
                     .|||||||.||..|.|||||..|....||.||.|||||.|||.|.||.||
BL00705___fhu     46 ATGATTGTCGAAAACTTAAACCTCCACATACCAAAAGGAAAAGTGACGAC     95

BSNT_04964___     99 CTTAATTGGCCCGAACGGCTGCGGGAAATCAACGATTTTAAAAACAATGT    148
                     |.|.||.||.||||||||.|||||.||||||||.||.||||||||.|||.
BL00705___fhu     96 CATGATCGGTCCGAACGGGTGCGGCAAATCAACCATATTAAAAACGATGG    145

BSNT_04964___    149 CCAGAATTATGCGTTCACATGCAGGTGCCGTCTATTTAAACGGCAAAGCG    198
                     |..|.||...||||||.|...|.||.|||||.||||||||||||||||||
BL00705___fhu    146 CGCGCATACAGCGTTCGCGAACGGGCGCCGTTTATTTAAACGGCAAAGCG    195

BSNT_04964___    199 ATTCATAAAATGTCTACAAAGGACATTGCAAAAGATATGGCGATTCTTCC    248
                     ||.||..|||||||.||.|||||..|.||.|||.|.||||||||||||||
BL00705___fhu    196 ATCCACCAAATGTCGACGAAGGATGTAGCCAAACAGATGGCGATTCTTCC    245

BSNT_04964___    249 ACAGACACCTGAAGCGCCGAGCGGCCTAACAGTGCACGAATTGGTGTCGT    298
                     .|||||.|||||.|||||..||||..|.||.||..|.||..|.||.||.|
BL00705___fhu    246 GCAGACGCCTGAGGCGCCAGGCGGTTTGACCGTATATGAGCTCGTTTCTT    295

BSNT_04964___    299 ACGGCAGGTTTCCGCATCAATCAGGATTCGGCAGATTAAATGACGAAGAC    348
                     |||||.|.|||||.||||||...|||.|.|||||..|....|.|||.|||
BL00705___fhu    296 ACGGCCGTTTTCCTCATCAAAAGGGAATGGGCAGGCTTTCGGCCGATGAC    345

BSNT_04964___    349 CGCCGGATTATCAAATGGGCGCTTGAAGAAACAGGCATGGCTGAATATGC    398
                     |||||.||..|..|||||.|.||..|||..|||||.|||       .|||
BL00705___fhu    346 CGCCGCATGGTTGAATGGTCTCTCCAAGTGACAGGAATG-------TTGC    388

BSNT_04964___    399 -------TGAACGGCCGATTGAGGCATTGTCAGGCGGACAGCGTCAACGT    441
                            |||.||||||||.||.||..|.||.||.||||||||.||.||.
BL00705___fhu    389 CTTTTTATGACCGGCCGATCGAAGCCCTTTCTGGAGGACAGCGCCAGCGC    438

BSNT_04964___    442 GTGTGGATTGCCATGGCGCTTGCGCAAGGGACGGAACTGCTT-CTGCTGG    490
                     ||.||||||||.|||||.|||||.||||..|||||.|| ||| ||.||.|
BL00705___fhu    439 GTCTGGATTGCGATGGCCCTTGCCCAAGAAACGGAGCT-CTTGCTCCTTG    487

BSNT_04964___    491 ATGAACCTACAACGTATCTTGATCTT-GCACATCAGCTTGAAATTCTGCA    539
                     |.|||||.|||||.||| |||..||| ||.||.|||||||||||||||||
BL00705___fhu    488 ACGAACCGACAACCTAT-TTGGACTTGGCGCACCAGCTTGAAATTCTGCA    536

BSNT_04964___    540 GCTGCTTGACAGACTCAACAAAGAGCAAGGGCGGACGATTTTAATGGTCA    589
                     .|||||.||.|..|||||..||||..||||.||.||||||||.|||||||
BL00705___fhu    537 ACTGCTGGAAAAGCTCAATCAAGAAGAAGGCCGAACGATTTTGATGGTCA    586

BSNT_04964___    590 TTCATGATCTTAACCATGCAGCTCGTTTTTCTCATTATATGATCGCGCTC    639
                     ||||.||.||.||||||||.||.||.||..|||||.|||||.|.|||||.
BL00705___fhu    587 TTCACGACCTCAACCATGCCGCCCGCTTCGCTCATCATATGGTGGCGCTG    636

BSNT_04964___    640 AAAAAAGGCACGGTCATCAAGGAAGGAACTGCTCTGGAGGTCATGACACC    689
                     ||....||..||.|..||||.||.||..|..|||..||.|||||||||.|
BL00705___fhu    637 AACCGGGGTGCGATTGTCAAAGAGGGCGCCCCTCATGAAGTCATGACATC    686

BSNT_04964___    690 GGACATTTTAAAGCAGGTATTTCAGATTGATGCCGAAATCGTGACT-GAT    738
                     .||..|.|||||..||||.||||||||||||||.|||||..| |.| ||.
BL00705___fhu    687 AGAAGTATTAAAAAAGGTGTTTCAGATTGATGCTGAAATTAT-ATTAGAC    735

BSNT_04964___    739 CCCCGTACAAATAAACCTGTATGCTTGACATATGA-CTTGATT-AAAAAT    786
                     ||.||.|||...|||||.||.|||.||||.||.|| ||  ||| |||||.
BL00705___fhu    736 CCGCGCACAGGAAAACCGGTGTGCCTGACTTACGATCT--ATTGAAAAAA    783

BSNT_04964___    787 GAAAAAGA------GCTAGTTACTGTATGA    810
                     |||.|.||      |||.|..||.|.||||
BL00705___fhu    784 GAAGAGGATCAGAGGCTGGCAACCGGATGA    813


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04964 and BL00705

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
