Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04927 and BL00728
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence dna-align/BSNT_04927___yvqF.1.5803.seq
# -bsequence dna-align/BL00728___liaF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04927___yvqF-BL00728___liaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04927___yvqF-BL00728___liaF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04927___yvqF
# 2: BL00728___liaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 761
# Identity: 527/761 (69.3%)
# Similarity: 527/761 (69.3%)
# Gaps: 64/761 ( 8.4%)
# Score: 1657.0
#
#
#=======================================
BSNT_04927___ 1 ATG------ACAAAAAAACAGCTTCTCGGATTGATCATTGCTTTATTCGG 44
||| ||||||||.|||||..|||||.|||||||.|...|.|||||
BL00728___lia 1 ATGCGTCTTACAAAAAACCAGCTGATCGGACTGATCATCGTACTCTTCGG 50
BSNT_04927___ 45 CATCAGTATGTTTTTGCAAATTATCGGAATAGGCGATCTGCTGTTTTGGC 94
.|||||.||.||||||||||..|.|||..|.||.||...|.|.||.||||
BL00728___lia 51 AATCAGCATATTTTTGCAAAACAGCGGGCTTGGAGACGCGTTATTCTGGC 100
BSNT_04927___ 95 CGCTCTTTTTTCTGATTGCCGGCTATTTCCTTAAAAAATATTCCCGTGAT 144
|||||..||||||..|||||||.|||||.||..|.|||||||||||....
BL00728___lia 101 CGCTCGCTTTTCTTTTTGCCGGGTATTTTCTCCACAAATATTCCCGCCGC 150
BSNT_04927___ 145 TGGCTTGGCTCCGTCATGTATATCTTTGCCGCGTTTCTATTTTTGAAAAA 194
|||||.||.||.|||||||||||.|||||.|..|||||..|..|||||.|
BL00728___lia 151 TGGCTCGGGTCTGTCATGTATATTTTTGCAGGCTTTCTGCTGCTGAAAGA 200
BSNT_04927___ 195 CCTCTTCAGCATCACCTTTAATTTATTCGGCTATGCGTTTGCCGCATTTC 244
|.||||||||||.||.||.|...|.|||||||.|...|||||||| ||||
BL00728___lia 201 CATCTTCAGCATTACATTCAGCCTGTTCGGCTTTTTCTTTGCCGC-TTTC 249
BSNT_04927___ 245 -TAATTTACGCCGGCTACAGGCT--TATCAAAGGGAAGCCGATATTTG-- 289
|||||||.||.||.|||.|||| |..|||| ..|||||.||||||
BL00728___lia 250 TTAATTTATGCGGGGTACCGGCTGGTGACAAA--TCAGCCGGTATTTGAC 297
BSNT_04927___ 290 -------AACCGAATGAGAAACAGGTCAATCTCAATAAAAA--AGAACAT 330
|.||||| |.|||||..| ||..|||| .|.|..|
BL00728___lia 298 CGCCATAAGCCGAA----AGACAGGGGA-----AAGGAAAAGGCGGATTT 338
BSNT_04927___ 331 CATGATCCGC--CAAAAGATGTAAAACATCCC--GACATGCGCAGCTTTT 376
|| |.|||| ||..||| |.||||.||| |.|| |||||||||.|
BL00728___lia 339 CA--AGCCGCTTCAGGAGA---AGAACAGCCCTGGCCA-GCGCAGCTTCT 382
BSNT_04927___ 377 TTATCGGTGAGCTGCAAA--TGATG-AAGCAGCCGTTTGATCTGAATGAT 423
||.||||||| ||.||| ||||| ||.|| ||.|||||..|.|||||.
BL00728___lia 383 TTTTCGGTGA--TGTAAAATTGATGAAAACA-CCTTTTGACTTAAATGAC 429
BSNT_04927___ 424 TTAAATGTTTCTGGTTTTATCGGTGATATCAAAATCGATTTGTCTAAAGC 473
||.|||.|.||.||.|||||||||||..|.||||||||||||||.||.||
BL00728___lia 430 TTGAATATCTCCGGGTTTATCGGTGACGTGAAAATCGATTTGTCAAAGGC 479
BSNT_04927___ 474 GATGATTCCCGAGGGAGAAAGCACAATCGTCATTAGCGGAG-TCATTGGA 522
|||.|||.|.|||||.||||.|||.|||||||||| |||.| |.||.|||
BL00728___lia 480 GATTATTTCAGAGGGCGAAAACACCATCGTCATTA-CGGGGTTGATCGGA 528
BSNT_04927___ 523 AACGTTGATATTTATGTACCATCGGACCTTGAAGTAGCTGTCAGCTCGGC 572
.|.||.||||||||..|.||.||.||.|||||.||..|..|||||||..|
BL00728___lia 529 GATGTCGATATTTACATTCCGTCCGATCTTGAGGTGTCCATCAGCTCTTC 578
BSNT_04927___ 573 TGTTTTTATAGGAGACATCAATCTGATCGGC--TCGAAGAAAAGCGGATT 620
||..||..|.||||||||..|..|.|||||| .||| ||||||||..|
BL00728___lia 579 TGCATTCGTTGGAGACATTGACGTCATCGGCGGCCGA--AAAAGCGGCAT 626
BSNT_04927___ 621 AAGCA--CGAAGGTATATGCCGCGTCA-ACCGATTT--TAGCGAGTCAAA 665
..||| |.|| |.|||.|||.|.|| | ||.|| .||| ||||...
BL00728___lia 627 CGGCAATCAAA--TCTATTCCGAGACAGA--GAATTACGAGC-AGTCGGC 671
BSNT_04927___ 666 GCGCCGGGTCAAAGTGTCCGTTTCCTTATTTATCGGTGATGTGGATGTGA 715
.||.|||||||||.|.||..||||..|.||||||||.||||||||||||.
BL00728___lia 672 ACGACGGGTCAAAATTTCGATTTCGCTGTTTATCGGCGATGTGGATGTGC 721
BSNT_04927___ 716 AGTACGTATGA 726
.||.|.|||||
BL00728___lia 722 GGTTCATATGA 732
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